BLASTX nr result

ID: Angelica22_contig00003979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00003979
         (1404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328049.1| predicted protein [Populus trichocarpa] gi|2...   298   3e-78
ref|XP_002274948.1| PREDICTED: zinc finger CCCH domain-containin...   291   3e-76
ref|XP_004136841.1| PREDICTED: zinc finger CCCH domain-containin...   285   2e-74
ref|XP_003539940.1| PREDICTED: zinc finger CCCH domain-containin...   280   5e-73
ref|XP_002309749.1| predicted protein [Populus trichocarpa] gi|2...   279   1e-72

>ref|XP_002328049.1| predicted protein [Populus trichocarpa] gi|222837458|gb|EEE75837.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  298 bits (762), Expect = 3e-78
 Identities = 178/393 (45%), Positives = 222/393 (56%), Gaps = 49/393 (12%)
 Frame = +1

Query: 79   MSSPAGGDERKFHPHQVFLAKK-LRQVDIPPRKLLARRN--ATLDMPIYSPRHDEETLLQ 249
            MS+      + + PHQ+   K+  R ++I P KLL ++    TLDM  Y      ET LQ
Sbjct: 1    MSTICAEQHKPYTPHQLLSPKRPFRDLEILPGKLLTKKTHQETLDMSPY------ETNLQ 54

Query: 250  KYLPYNNPQDD---EDDCHLYSADQFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRD 420
            ++LPYN+  ++   + +   YS+D FRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRD
Sbjct: 55   RFLPYNDYSNEKVLDGELDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRD 114

Query: 421  PRKYHYSGIICQDFRRGECPRGDNCEFAHGVFECWLHPARYRTEACKDGRSCQRKVCFFA 600
            PR++HYSGI+C +F+RG C RG+NCEF+HGVFECWLHP+RYRTEACKDG++C+RKVCFFA
Sbjct: 115  PRRFHYSGIVCPEFKRGGCSRGENCEFSHGVFECWLHPSRYRTEACKDGKNCKRKVCFFA 174

Query: 601  HTTRQLRILP--SQEFEGLQCQCS--------------VGSPNSTLMRMPDVSPPLSPSV 732
            H+ RQLRILP  S   + L   CS                SP STL+ M  +SPPLSPS+
Sbjct: 175  HSPRQLRILPEVSSRNKSLASPCSSLNHSHCCVVCHSMTSSPTSTLLGMSHMSPPLSPSL 234

Query: 733  ----------QMGGFSPISRCNGRRALAELADLKRRHGPGYKKELLKIMESFQAMNMNKK 882
                       + GFSPISR N      E     R     YK  L ++M S +AMN N+ 
Sbjct: 235  SPPLSPVKHQSLSGFSPISRYN------ETLSKFRAGVVSYKDVLSELMSSLEAMNFNEG 288

Query: 883  NSASDSGS-SGDHNKN----KLW-VDVSNLNEDDXXXXXXXXXXXXXXXXXXXXXXXXXN 1044
             S S   S S +HN+N      W +DVS   ED                           
Sbjct: 289  ASVSSPMSLSTNHNRNVNSTTPWNIDVSFSGEDQPQFILSPSTPTPSSKFFNGDCSSNKG 348

Query: 1045 FDFPEE-----NVADGA------PDFGWVNELL 1110
                ++     N+ DG       PD GWVNELL
Sbjct: 349  LFVDDKINDHNNIGDGGLACTSDPDLGWVNELL 381


>ref|XP_002274948.1| PREDICTED: zinc finger CCCH domain-containing protein 2-like [Vitis
            vinifera]
          Length = 360

 Score =  291 bits (745), Expect = 3e-76
 Identities = 173/376 (46%), Positives = 219/376 (58%), Gaps = 32/376 (8%)
 Frame = +1

Query: 79   MSSPAGGDERKFHPHQVFLAKKLRQVDIPPRKLLARRNATLDMP-IYSPRHDE-----ET 240
            MS  +    + F  HQ+F  K    +DIPPRKLL+RR  +L+   I+S          ET
Sbjct: 1    MSGVSADQHKFFLSHQLFNKKT---IDIPPRKLLSRRANSLESSDIFSDSPKALGAAGET 57

Query: 241  LLQKYLPYNNPQDDEDDCHLYSADQFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRD 420
            L QK+LP+N   DDE D   YS+D FRM+EFKVRRCTRSRSHDWTDCPFAHPGEKARRRD
Sbjct: 58   LFQKFLPFNCGDDDESDP--YSSDHFRMFEFKVRRCTRSRSHDWTDCPFAHPGEKARRRD 115

Query: 421  PRKYHYSGIICQDFRRGECPRGDNCEFAHGVFECWLHPARYRTEACKDGRSCQRKVCFFA 600
            PR+YHYSG +C ++RRG C RGDNCEF+HGVFECWLHPARYRTEACKDG++C+RKVCFFA
Sbjct: 116  PRRYHYSGTVCSEYRRGGCSRGDNCEFSHGVFECWLHPARYRTEACKDGKNCKRKVCFFA 175

Query: 601  HTTRQLRIL---------PSQEFEGLQCQC----SVGSPNSTLMRMPDVSPPLSPSVQM- 738
            H+ +QLR+L         P  +F  L   C    S  SP STLM     SPP SPS  + 
Sbjct: 176  HSRKQLRVLPLHSQTNGTPDVKFSPLNHCCVFCHSATSPTSTLMGTSHFSPPASPSPPLS 235

Query: 739  ---GGFSPISRCNGRRALAELADLKR-RHGP-GYKKELL-KIMESFQAMNMNK-----KN 885
                 +SPISR N R    + +++ + RH    Y K+++ ++M S +A+N+N+      N
Sbjct: 236  PVNATYSPISRYNDRSTSLDSSNMSQFRHVMLSYNKDVVAELMSSLEAININEASPEHTN 295

Query: 886  SASDS-GSSGDHNKNKLWVDVSNLNEDDXXXXXXXXXXXXXXXXXXXXXXXXXNFDFPEE 1062
               DS  +S DH +  L   + N +                                  E
Sbjct: 296  PLVDSCFASEDHQQFSLSPSIPNAS------------GSRHFFNGDCSSKSSIEDKLSSE 343

Query: 1063 NVADGAPDFGWVNELL 1110
            N +   PD GWVN+LL
Sbjct: 344  NGSWACPDLGWVNDLL 359


>ref|XP_004136841.1| PREDICTED: zinc finger CCCH domain-containing protein 2-like [Cucumis
            sativus] gi|449478965|ref|XP_004155466.1| PREDICTED: zinc
            finger CCCH domain-containing protein 2-like [Cucumis
            sativus]
          Length = 388

 Score =  285 bits (730), Expect = 2e-74
 Identities = 163/369 (44%), Positives = 207/369 (56%), Gaps = 47/369 (12%)
 Frame = +1

Query: 145  LRQVDIPPRKLLARRNATLDMPIYSPR--HDEETLLQKYLPYNNPQDDEDDCHLYSADQF 318
            L  +++PP K        L+M   SPR  +  E+LLQK+LP+N   + E+D   YS+D F
Sbjct: 33   LHHINLPPTK------NHLEMSSDSPRFSYAVESLLQKFLPFNGEDELEEDGDPYSSDHF 86

Query: 319  RMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRKYHYSGIICQDFRRGECPRGDNCE 498
            RMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPR++HYSG +C +FRRG C RGD CE
Sbjct: 87   RMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCE 146

Query: 499  FAHGVFECWLHPARYRTEACKDGRSCQRKVCFFAHTTRQLRILPS-QEFEG--------- 648
            FAHGVFECWLHPARYRTEACKDG++C+RKVCFFAH+ R+LR+LP    F+          
Sbjct: 147  FAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSNFQTGSCSSPNNK 206

Query: 649  -------------------LQCQCS----VGSPNSTLMRM----PDVSPPLSPSVQMGGF 747
                               L C C       SP STL  M    P  SPP SP   + GF
Sbjct: 207  RSSSSLRSPSTASASNHCCLFCHCGGAAVTSSPTSTLFGMSHLSPPHSPPHSPGKPINGF 266

Query: 748  SPISRCNGRRALAELADLKRRHGP-GYKKELLKIMESFQAMNMNKKNS--ASDSGSSGDH 918
            SPISR N         D  + +G   YK  L ++M S ++MNM+  N+  A+ + ++   
Sbjct: 267  SPISRYN--------PDQSKLNGVLSYKDALTELMSSIESMNMDDANATLAAAAAAASGP 318

Query: 919  NKNKLWVDVSNLNEDDXXXXXXXXXXXXXXXXXXXXXXXXXNFD-----FPEENVADGAP 1083
             +   W+DVS+LN +D                         N +     +   + +   P
Sbjct: 319  RQTIPWIDVSSLNNEDQLQFVLSPSTPNVSTASVKFSVENNNNNGWASAYASASTSASDP 378

Query: 1084 DFGWVNELL 1110
            D GWVN+LL
Sbjct: 379  DLGWVNDLL 387


>ref|XP_003539940.1| PREDICTED: zinc finger CCCH domain-containing protein 2-like [Glycine
            max]
          Length = 356

 Score =  280 bits (717), Expect = 5e-73
 Identities = 169/370 (45%), Positives = 204/370 (55%), Gaps = 34/370 (9%)
 Frame = +1

Query: 103  ERKFH---PHQVF-LAKKLRQVDIP--PRKLLARRNATLDMPIYSPRHDEETLLQKYLPY 264
            E KF     HQ+  L K LR +DIP  PRKLL RR+A +   +      ++TL  KYLP+
Sbjct: 7    EHKFQLQPSHQLLSLKKSLRDIDIPVPPRKLLTRRSAAVH-DVSGDMFSDDTLRHKYLPH 65

Query: 265  NNPQD--DEDDCHLYSADQFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRKYHY 438
            N   D  D+D    Y++DQFRM+EFKVRRCTRSRSHDWTDCPF HPGEKARRRDPR++HY
Sbjct: 66   NGSTDSSDDDSGDPYASDQFRMFEFKVRRCTRSRSHDWTDCPFVHPGEKARRRDPRRFHY 125

Query: 439  SGIICQDFRRGECPRGDNCEFAHGVFECWLHPARYRTEACKDGRSCQRKVCFFAHTTRQL 618
            S  +C +FRRG+C RGD CEF+HGVFECWLHP+RYRTEACKDGR+C+RKVCFFAHT RQL
Sbjct: 126  SATVCPEFRRGQCDRGDACEFSHGVFECWLHPSRYRTEACKDGRNCKRKVCFFAHTPRQL 185

Query: 619  RILPSQEFEG--------------------LQCQC--SVGSPNSTLMRMPDVSPPLSPSV 732
            R+L S E                       L C C  S  SP STL  M   SPPLSP  
Sbjct: 186  RVLHSNENSNKKKCTNMSPHNNNNNTNNCCLVCHCSSSTRSPTSTLFGMSHFSPPLSPP- 244

Query: 733  QMGGFSPISRCNGRRALAELADLKRRHG-PGYKKELL-KIMESFQAMNMNKKNSASDSGS 906
                 SP S            +    HG   Y K++L ++M S + +N  + +    S +
Sbjct: 245  -----SPSS--------PSRFETNHHHGVVKYNKDVLSELMCSMEGLNFGEASLL--SAA 289

Query: 907  SGDHNKNKLWVDVSNLNEDDXXXXXXXXXXXXXXXXXXXXXXXXXNFDFPEENVADG--A 1080
            S  HN    W+DVS    +D                          F   E  V D   +
Sbjct: 290  SKPHNNLSSWLDVS----EDHNQKQFSTLSPTITACGSFSNNGNGRFLREESGVVDDVIS 345

Query: 1081 PDFGWVNELL 1110
            PD  WVNELL
Sbjct: 346  PDLAWVNELL 355


>ref|XP_002309749.1| predicted protein [Populus trichocarpa] gi|222852652|gb|EEE90199.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score =  279 bits (714), Expect = 1e-72
 Identities = 161/336 (47%), Positives = 198/336 (58%), Gaps = 40/336 (11%)
 Frame = +1

Query: 79  MSSPAGGDERKFHPHQVFLAKK--LRQVDIPPRKLLARRN--ATLDMPIYSPRHDEETLL 246
           M + +    + F  HQ+    K  +R ++IPPRKLL R+    TLD+  Y      ET L
Sbjct: 1   MGTISAEQHKLFPSHQILSPHKPLIRDLEIPPRKLLTRKTHQETLDVSPY------ETDL 54

Query: 247 QKYLPYN---NPQDDEDDCHLYSADQFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRR 417
           Q++LPYN   N  D +D+   YS+D FRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRR
Sbjct: 55  QEFLPYNDSNNEIDIDDELDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRR 114

Query: 418 DPRKYHYSGIICQDFRRGECPRGDNCEFAHGVFECWLHPARYRTEACKDGRSCQRKVCFF 597
           D R++HYSG +C +F RG C RGDNCEFAHGVFECWLHP RYRTEACKDG++C+RKVCFF
Sbjct: 115 DLRRFHYSGAVCPEFIRGGCNRGDNCEFAHGVFECWLHPFRYRTEACKDGKNCKRKVCFF 174

Query: 598 AHTTRQLRILPS-------------QEFEGLQCQCSV-----GSPNSTLMRMPDVSPPLS 723
           AH+ RQLRILP                     C C+V      SP STL+ M  +SPPLS
Sbjct: 175 AHSPRQLRILPEGSSHNKTLGSSPCSSLNHGHCCCAVCHSMTSSPTSTLLGMSPLSPPLS 234

Query: 724 PSV----------QMGGFSPISRCNGRRALAELADLKRRHGPGYKKELLKIMESFQAMNM 873
           PS+           +  FSPISR       +E     R     YK    ++M S +AMN 
Sbjct: 235 PSLTPSLSPVKHQSLSRFSPISR------YSETLSKFRAGVVSYKDVFTELMSSLEAMNF 288

Query: 874 NKKNSASDSGSSGDHNKNKL-----WVDVSNLNEDD 966
           N+    S   S   ++K  +      +DVS   ED+
Sbjct: 289 NEAAGVSSPMSLYPNHKRNVNNTPRNIDVSFDGEDE 324


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