BLASTX nr result
ID: Angelica22_contig00003916
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00003916
(1378 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin... 578 e-163
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu... 578 e-163
ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2... 546 e-153
ref|XP_002302838.1| predicted protein [Populus trichocarpa] gi|2... 505 e-141
emb|CBI28414.3| unnamed protein product [Vitis vinifera] 494 e-137
>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Vitis
vinifera]
Length = 572
Score = 578 bits (1491), Expect = e-163
Identities = 285/414 (68%), Positives = 340/414 (82%), Gaps = 3/414 (0%)
Frame = -1
Query: 1234 MDFTDSTKVVYNRIQKLEPENVSKIIGYLLLQDHGEREMIRLAFSPDNVLISLIDKAKT- 1058
MDF++STKVVYNRIQKLEPENVSKIIGYLLLQDHGER+MIR AF+ DN + LI+KAK
Sbjct: 1 MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 60
Query: 1057 -GLSSKPVASLSVSPPQMIPTPISELPLQFTXXXXXXXXXXXXXXXRVPNPYWDPQVPAE 881
GLSSKP S +SPPQ+ P+P+S+LPLQFT N YWDPQV +
Sbjct: 61 LGLSSKPAVSSPISPPQVNPSPVSDLPLQFTPFSPASARPFPSPRPG--NSYWDPQVNGD 118
Query: 880 QLPVRNL-EYVPLGYTESALDDYRLQNQLQFFSLEDQMDVANSNQSDVSGNYYLPKTAVG 704
Q V L ++VP GY++S DD+RLQ+Q+ F ++EDQ++ NS S+ SG+YY + A+
Sbjct: 119 QQQVHKLGDFVPQGYSDSLPDDFRLQSQIHFLAMEDQLE--NSVGSEFSGSYYYAEQALN 176
Query: 703 PRANRRSPSLPEFPVKVCHYFSKGFCKHGSNCRYFHGHLIPESFSQMYHSNTNEIANEDQ 524
R +RRSPSLPEFP+KVCHYF+KGFCKHG++CRYFHGH + ESFSQ++ NE+ N+D
Sbjct: 177 TRISRRSPSLPEFPLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELPNDDH 236
Query: 523 DFSPGSLEKLEVEITELLKSRRGLPVSIASLPMLYYEKYGKTLQAEGYLTESQRHGKAGY 344
F PGSLEKLE+E+TELLKSRRG PVSIASLPM+YYEKYG+TLQAEGYLTESQRHGKAGY
Sbjct: 237 VFPPGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGY 296
Query: 343 SLTKLLARLKNSIRLIDRPHGQHCVILAKDVPEYMDYNGERNEHGGMVNGSRQIYLTFPA 164
SLTKLLARLKNSIRLIDRPHGQH VILA+D+P+YM+ NGER++ G +V S+QIYLTFPA
Sbjct: 297 SLTKLLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSSKQIYLTFPA 356
Query: 163 ESTFTEQDVSNYFNKYGPVQDVRIPCQQRRMFGFVTFVYPESVKQILAKGNPHF 2
+STFTEQDVSNYFNK+GPVQDVRIPCQQ+RMFGFVTFV+ E+VKQIL KGNPH+
Sbjct: 357 DSTFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHY 410
>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein, putative
[Ricinus communis]
Length = 578
Score = 578 bits (1491), Expect = e-163
Identities = 280/414 (67%), Positives = 338/414 (81%), Gaps = 3/414 (0%)
Frame = -1
Query: 1234 MDFTDSTKVVYNRIQKLEPENVSKIIGYLLLQDHGEREMIRLAFSPDNVLISLIDKAKTG 1055
MDFT+STKVVYNRIQKLEPENVSKIIGYLLLQDH EREMIRLAFSPDN++ SLI KAK+
Sbjct: 1 MDFTESTKVVYNRIQKLEPENVSKIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKAKSD 60
Query: 1054 LS-SKPVASLSVSPPQMIPTPISELPLQFTXXXXXXXXXXXXXXXR--VPNPYWDPQVPA 884
L +KP S +SP Q+ +P+S++PLQFT + YWD QV
Sbjct: 61 LGLNKPALSAPISPSQVNTSPVSDIPLQFTPFSPASAHPISSPAASRRTASAYWDAQVTG 120
Query: 883 EQLPVRNLEYVPLGYTESALDDYRLQNQLQFFSLEDQMDVANSNQSDVSGNYYLPKTAVG 704
+Q V NL++ GY+++ +DYRLQN +QF +L+DQ + A+S SD S NY+ + A+G
Sbjct: 121 DQQQVPNLDFGSPGYSDTVPEDYRLQNHMQFLTLDDQFEFAHSVNSDFSSNYFYSEPALG 180
Query: 703 PRANRRSPSLPEFPVKVCHYFSKGFCKHGSNCRYFHGHLIPESFSQMYHSNTNEIANEDQ 524
PR NRRSPSLPEFP+K+CHYFSKG+CKHG+NCRY HGH +PE FSQ++ + +N+ +N++
Sbjct: 181 PRTNRRSPSLPEFPLKICHYFSKGYCKHGNNCRYVHGHPMPEGFSQIFSTKSNDFSNDEH 240
Query: 523 DFSPGSLEKLEVEITELLKSRRGLPVSIASLPMLYYEKYGKTLQAEGYLTESQRHGKAGY 344
SPGSLEKLE+E+ ELLKSRRG+PVSIASLPM+YYEKYGKTLQAEGYLTESQRHGKAGY
Sbjct: 241 VVSPGSLEKLEMELAELLKSRRGMPVSIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGY 300
Query: 343 SLTKLLARLKNSIRLIDRPHGQHCVILAKDVPEYMDYNGERNEHGGMVNGSRQIYLTFPA 164
SLTKLLARLKNSIR+IDRPHGQH VIL +DVP+Y++Y GERN+ GG+V GSRQIYLTFPA
Sbjct: 301 SLTKLLARLKNSIRVIDRPHGQHSVILEEDVPKYLEYVGERNDPGGIVAGSRQIYLTFPA 360
Query: 163 ESTFTEQDVSNYFNKYGPVQDVRIPCQQRRMFGFVTFVYPESVKQILAKGNPHF 2
ES FTE DVS YF+K+GPVQDVRIPCQQ+RMFGFVTF++ E+VKQILAKGNPH+
Sbjct: 361 ESIFTEHDVSIYFSKFGPVQDVRIPCQQKRMFGFVTFIFVETVKQILAKGNPHY 414
>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
predicted protein [Populus trichocarpa]
Length = 554
Score = 546 bits (1406), Expect = e-153
Identities = 271/412 (65%), Positives = 331/412 (80%), Gaps = 2/412 (0%)
Frame = -1
Query: 1234 MDFTDSTKVVYNRIQKLEPENVSKIIGYLLLQDHGEREMIRLAFSPDNVLISLIDKAKT- 1058
MDF++STKVVYNRIQ++EPE V KIIGY+LLQ+HGEREMIRLAFSPDN++ + I KAK+
Sbjct: 1 MDFSESTKVVYNRIQEIEPEFVGKIIGYILLQNHGEREMIRLAFSPDNLIYATISKAKSD 60
Query: 1057 -GLSSKPVASLSVSPPQMIPTPISELPLQFTXXXXXXXXXXXXXXXRVPNPYWDPQVPAE 881
GL+ PV + +SP Q+ P P+S++ LQF +PN +
Sbjct: 61 LGLNKTPVPN-PISPSQVNPAPVSDVHLQF-----------------IPNTAVSSHPISS 102
Query: 880 QLPVRNLEYVPLGYTESALDDYRLQNQLQFFSLEDQMDVANSNQSDVSGNYYLPKTAVGP 701
+ +R + ++ + DYRLQNQ+QF + +DQ++ NS D S +Y+ P+ A+GP
Sbjct: 103 PIKIRTAG----SFWDAQVTDYRLQNQMQFLTSDDQLEFVNS---DFSSSYFYPEPALGP 155
Query: 700 RANRRSPSLPEFPVKVCHYFSKGFCKHGSNCRYFHGHLIPESFSQMYHSNTNEIANEDQD 521
R +RRSPSLPEFPVK+CHYF+KGFCKHG+NCRYFHGH +PESFSQ+ N+NEIAN++
Sbjct: 156 RTSRRSPSLPEFPVKICHYFNKGFCKHGNNCRYFHGHPMPESFSQILSLNSNEIANDEHF 215
Query: 520 FSPGSLEKLEVEITELLKSRRGLPVSIASLPMLYYEKYGKTLQAEGYLTESQRHGKAGYS 341
SPGSLEKLE+E+TELLKSRRG+PVSIASLPM+YYEKYG+ LQAEGYLTESQRHGKAGYS
Sbjct: 216 ISPGSLEKLELELTELLKSRRGVPVSIASLPMMYYEKYGRMLQAEGYLTESQRHGKAGYS 275
Query: 340 LTKLLARLKNSIRLIDRPHGQHCVILAKDVPEYMDYNGERNEHGGMVNGSRQIYLTFPAE 161
LTKLLARLKNSIRLIDRPHGQH VIL +DVP+Y++Y GERN+ GG+V GSRQIYLTFPAE
Sbjct: 276 LTKLLARLKNSIRLIDRPHGQHSVILTEDVPKYLEYAGERNDPGGIVAGSRQIYLTFPAE 335
Query: 160 STFTEQDVSNYFNKYGPVQDVRIPCQQRRMFGFVTFVYPESVKQILAKGNPH 5
STFTEQDVSNYF+K+GPVQDVRIPCQQ+RMFGFVTFV+ E+VKQIL+KGNPH
Sbjct: 336 STFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILSKGNPH 387
>ref|XP_002302838.1| predicted protein [Populus trichocarpa] gi|222844564|gb|EEE82111.1|
predicted protein [Populus trichocarpa]
Length = 391
Score = 505 bits (1301), Expect = e-141
Identities = 261/412 (63%), Positives = 314/412 (76%), Gaps = 2/412 (0%)
Frame = -1
Query: 1234 MDFTDSTKVVYNRIQKLEPENVSKIIGYLLLQDHGEREMIRLAFSPDNVLISLIDKAKT- 1058
MDF++STKVVYNRIQ +EPE V KIIGY+L+Q+HGEREMIRLAFSPDN++ ++I KAK+
Sbjct: 1 MDFSESTKVVYNRIQAIEPEFVGKIIGYILIQNHGEREMIRLAFSPDNLIYAMICKAKSD 60
Query: 1057 -GLSSKPVASLSVSPPQMIPTPISELPLQFTXXXXXXXXXXXXXXXRVPNPYWDPQVPAE 881
GL+ PV +L +SP Q+ P+P+S++P QF +PN
Sbjct: 61 LGLNKIPVLNL-ISPSQVNPSPVSDVPQQF-----------------IPNSTVSSHPIFS 102
Query: 880 QLPVRNLEYVPLGYTESALDDYRLQNQLQFFSLEDQMDVANSNQSDVSGNYYLPKTAVGP 701
+ VR GY+E +DYR+QNQ+QF +L+D ++ NS D S +Y P+ A+ P
Sbjct: 103 PVKVRTA-----GYSEMVPEDYRIQNQMQFLALDDPIEFVNS---DFSSSYIYPEPALSP 154
Query: 700 RANRRSPSLPEFPVKVCHYFSKGFCKHGSNCRYFHGHLIPESFSQMYHSNTNEIANEDQD 521
R +RRSPSLPEFPVK+CHYF KGFCKHG+NC SN NEIANE+
Sbjct: 155 RTSRRSPSLPEFPVKICHYFIKGFCKHGNNCS----------------SNLNEIANEEFV 198
Query: 520 FSPGSLEKLEVEITELLKSRRGLPVSIASLPMLYYEKYGKTLQAEGYLTESQRHGKAGYS 341
SPGS EKLE+E+TELLKSRRG+PVSIASLPM+YYE YG+TLQAEGYLTESQRHGKAGYS
Sbjct: 199 VSPGSFEKLELELTELLKSRRGVPVSIASLPMMYYEMYGRTLQAEGYLTESQRHGKAGYS 258
Query: 340 LTKLLARLKNSIRLIDRPHGQHCVILAKDVPEYMDYNGERNEHGGMVNGSRQIYLTFPAE 161
LTKLLARLKNSIRLIDRPHGQH VILA+D P+Y++Y GERN+ GG+V GSRQIYLTFPAE
Sbjct: 259 LTKLLARLKNSIRLIDRPHGQHSVILAEDFPKYLEYAGERNDPGGIVAGSRQIYLTFPAE 318
Query: 160 STFTEQDVSNYFNKYGPVQDVRIPCQQRRMFGFVTFVYPESVKQILAKGNPH 5
STFTEQDVSNYF+ +GPVQDVRIPCQQ+RMFGFVTFV+ E+VK+ILAKGNPH
Sbjct: 319 STFTEQDVSNYFSNFGPVQDVRIPCQQKRMFGFVTFVFAETVKKILAKGNPH 370
>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 494 bits (1272), Expect = e-137
Identities = 257/423 (60%), Positives = 310/423 (73%), Gaps = 1/423 (0%)
Frame = -1
Query: 1267 VFRWFFRLNFEMDFTDSTKVVYNRIQKLEPENVSKIIGYLLLQDHGEREMIRLAFSPDNV 1088
+F W ++ +MDF++STKVVYNRIQKLEPENVSKIIGYLLLQDHGER+MIR AF+ DN
Sbjct: 6 LFSW---VDTDMDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNA 62
Query: 1087 LISLIDKAKTGLSSKPVASLSVSPPQMIPTPISELPLQFTXXXXXXXXXXXXXXXRVPNP 908
+ LI+KAK A L +S + +PIS
Sbjct: 63 IQCLINKAK--------AELGLSSKPAVSSPISP-------------------------- 88
Query: 907 YWDPQV-PAEQLPVRNLEYVPLGYTESALDDYRLQNQLQFFSLEDQMDVANSNQSDVSGN 731
PQV P+ + +Q+ F ++EDQ++ NS S+ SG+
Sbjct: 89 ---PQVNPSPSM-----------------------SQIHFLAMEDQLE--NSVGSEFSGS 120
Query: 730 YYLPKTAVGPRANRRSPSLPEFPVKVCHYFSKGFCKHGSNCRYFHGHLIPESFSQMYHSN 551
YY + A+ R +RRSPSLPEFP+KVCHYF+KGFCKHG++CRYFHGH + ESFSQ++
Sbjct: 121 YYYAEQALNTRISRRSPSLPEFPLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPG 180
Query: 550 TNEIANEDQDFSPGSLEKLEVEITELLKSRRGLPVSIASLPMLYYEKYGKTLQAEGYLTE 371
NE+ N+D F PGSLEKLE+E+TELLKSRRG PVSIASLPM+YYEKYG+TLQAEGYLTE
Sbjct: 181 ANELPNDDHVFPPGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTE 240
Query: 370 SQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHCVILAKDVPEYMDYNGERNEHGGMVNGS 191
SQRHGKAGYSLTKLLARLKNSIRLIDRPHGQH VILA+D+P+YM+ NGER++ G +V S
Sbjct: 241 SQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSS 300
Query: 190 RQIYLTFPAESTFTEQDVSNYFNKYGPVQDVRIPCQQRRMFGFVTFVYPESVKQILAKGN 11
+QIYLTFPA+STFTEQDVSNYFNK+GPVQDVRIPCQQ+RMFGFVTFV+ E+VKQIL KGN
Sbjct: 301 KQIYLTFPADSTFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGN 360
Query: 10 PHF 2
PH+
Sbjct: 361 PHY 363