BLASTX nr result

ID: Angelica22_contig00003524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00003524
         (2157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539690.1| PREDICTED: RNA and export factor-binding pro...   225   3e-56
ref|XP_003538006.1| PREDICTED: RNA and export factor-binding pro...   224   6e-56
ref|XP_002531375.1| RNA and export factor binding protein, putat...   220   1e-54
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro...   218   7e-54
emb|CAG26903.1| ALY protein [Nicotiana benthamiana]                   216   2e-53

>ref|XP_003539690.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine
           max]
          Length = 247

 Score =  225 bits (574), Expect = 3e-56
 Identities = 131/248 (52%), Positives = 156/248 (62%), Gaps = 3/248 (1%)
 Frame = +1

Query: 190 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXX-NNRSSYRPAPYS-SKAPDSVWQH 363
           +A+D SLDD+I +NKK                      NR++ R APY+ +KAP++ WQH
Sbjct: 3   AAMDMSLDDIIKNNKKSGSGSSRGRTRPSGSGPTRRLPNRAANRAAPYAPAKAPEATWQH 62

Query: 364 DMFSSDQAMANQGY-VDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSVVH 540
           D+++ DQ +A  GY     RA+SIETGTKLYISNLDYGVS +DIKELFAE+GDLKR  VH
Sbjct: 63  DLYA-DQHVAAAGYPAQGGRAASIETGTKLYISNLDYGVSNDDIKELFAEVGDLKRHAVH 121

Query: 541 YDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXXXX 720
           YDRSGRSKGTAEVVFSRR DA+SAV +YNNVQLDGKPMK+EIVGTNI TP          
Sbjct: 122 YDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTNISTPGVA-PAPNGA 180

Query: 721 XXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLEKY 900
                G+PRS Q                                GEK+S+DDLDADLEKY
Sbjct: 181 IGNFNGVPRSGQ-GRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDLDADLEKY 239

Query: 901 HASSMQIN 924
           HA +MQ+N
Sbjct: 240 HAEAMQLN 247


>ref|XP_003538006.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine
           max]
          Length = 247

 Score =  224 bits (572), Expect = 6e-56
 Identities = 130/248 (52%), Positives = 156/248 (62%), Gaps = 3/248 (1%)
 Frame = +1

Query: 190 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXX-NNRSSYRPAPYSS-KAPDSVWQH 363
           +A+D SLDD+I +NKK                      NR++ R APY++ KAP++ WQH
Sbjct: 3   AAMDMSLDDIIKNNKKSGSGSSRGRIRPSGSGPSRRFPNRAANRAAPYATAKAPEATWQH 62

Query: 364 DMFSSDQAMANQGY-VDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSVVH 540
           D+++ DQ +A  GY     RA+SIETGTKLYISNLDYGVS +DIKELFAE+GDLKR  VH
Sbjct: 63  DLYA-DQQVAAAGYPAQGGRAASIETGTKLYISNLDYGVSSDDIKELFAEVGDLKRHAVH 121

Query: 541 YDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXXXX 720
           YDRSGRSKGTAEVVFSRR DA++AV +YNNVQLDGKPMK+EIVGTNI TP          
Sbjct: 122 YDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVA-PARNGA 180

Query: 721 XXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLEKY 900
                G+PRS Q                                GEK+S+DDLDADLEKY
Sbjct: 181 IGNFDGVPRSGQ-GRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDLDADLEKY 239

Query: 901 HASSMQIN 924
           HA +MQ+N
Sbjct: 240 HAEAMQLN 247


>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
           gi|223529035|gb|EEF31023.1| RNA and export factor
           binding protein, putative [Ricinus communis]
          Length = 247

 Score =  220 bits (561), Expect = 1e-54
 Identities = 132/250 (52%), Positives = 151/250 (60%), Gaps = 5/250 (2%)
 Frame = +1

Query: 190 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXX-NNRSSYRPAPYSS-KAPDSVWQH 363
           SALD SLDD+I  NKK                     NNR + R APY++ KAP+S WQH
Sbjct: 3   SALDMSLDDIIKSNKKPGSGNSRGRGRSSGPGPTRRFNNRGTNRAAPYAAAKAPESTWQH 62

Query: 364 DMFSSDQAMA---NQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSV 534
           DMF+    M     QG    +RAS IETGTKLYISNL+YGVS EDIKELF+E+GDLKR  
Sbjct: 63  DMFTDQGGMGMFQGQGG-GGSRASGIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYS 121

Query: 535 VHYDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXX 714
           +HYDRSGRSKGTAEVVFSRR DAL+AV +YNNVQLDGKPMK+EIVGTNI TPAA      
Sbjct: 122 IHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAA-TPAAN 180

Query: 715 XXXXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLE 894
                  G PR  Q                                GEK+S++DLDADLE
Sbjct: 181 GNFGNSNGAPRGGQ---GRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAEDLDADLE 237

Query: 895 KYHASSMQIN 924
           KYH+ +MQ N
Sbjct: 238 KYHSEAMQTN 247


>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
           gi|297746115|emb|CBI16171.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score =  218 bits (554), Expect = 7e-54
 Identities = 131/248 (52%), Positives = 151/248 (60%), Gaps = 3/248 (1%)
 Frame = +1

Query: 190 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXXN--NRSSYRPAPYS-SKAPDSVWQ 360
           +ALD SLDDLI +NK+                       NR + R  PYS SKAP++ WQ
Sbjct: 3   NALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITPYSVSKAPETTWQ 62

Query: 361 HDMFSSDQAMANQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSVVH 540
           HDMF+ DQA A        R S+IETGTKLYISNLDYGVS EDIKELF+E+GDLKR  +H
Sbjct: 63  HDMFA-DQAAAYPAQA--GRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIH 119

Query: 541 YDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXXXX 720
           YDRSGRSKGTAEVVFSRR DA++AV +YNNVQLDGKPMK+EIVGTNI TPAA        
Sbjct: 120 YDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPVTNGT 179

Query: 721 XXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLEKY 900
                G  RS Q                                GEK+S++DLDADLEKY
Sbjct: 180 FGNSNGGLRSAQ----GRVGSQGRPRGGSGGRGFGRGRGRGRGRGEKVSAEDLDADLEKY 235

Query: 901 HASSMQIN 924
           H+ +MQIN
Sbjct: 236 HSEAMQIN 243


>emb|CAG26903.1| ALY protein [Nicotiana benthamiana]
          Length = 252

 Score =  216 bits (551), Expect = 2e-53
 Identities = 130/250 (52%), Positives = 148/250 (59%), Gaps = 5/250 (2%)
 Frame = +1

Query: 190 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXXN---NRSSYRPAPYSS-KAPDSVW 357
           +ALD SLDDLI  NK                         NRS+ R APYS+ KAP++ W
Sbjct: 4   AALDMSLDDLIKKNKTDTGGKRRGRGRGGASGPGPARRFPNRSANRAAPYSTAKAPEAAW 63

Query: 358 QHDMFSS-DQAMANQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSV 534
            HDMF++ DQA           ASSI TGTKLYISNLDYGVS EDIKELF+E GDLKR  
Sbjct: 64  NHDMFAAADQAFPFGQAGGDQAASSISTGTKLYISNLDYGVSNEDIKELFSEAGDLKRYA 123

Query: 535 VHYDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXX 714
           +HYDRSGRSKGTAEVVFSRRQDAL+AV +YNNVQLDGKPMK+EIVGTNI TPAA      
Sbjct: 124 IHYDRSGRSKGTAEVVFSRRQDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAAPAFNGA 183

Query: 715 XXXXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLE 894
                  G PR++Q                                GEK+S++DLDADL 
Sbjct: 184 FGFGDTNGGPRTDQ-ARSGGFGRSRGGRGRGRGFRGGSRGRGRGDRGEKVSAEDLDADLM 242

Query: 895 KYHASSMQIN 924
           KYH  +MQ N
Sbjct: 243 KYHTEAMQTN 252


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