BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00003452
         (2834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16128.3| unnamed protein product [Vitis vinifera]              536   e-155
emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]   535   e-153
ref|XP_002302937.1| predicted protein [Populus trichocarpa] gi|2...   507   e-148
ref|NP_192906.1| pentatricopeptide repeat-containing protein [Ar...   506   e-144
ref|XP_002887091.1| pentatricopeptide repeat-containing protein ...   492   e-140

>emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  536 bits (1382), Expect(2) = e-155
 Identities = 256/419 (61%), Positives = 332/419 (79%)
 Frame = -1

Query: 2345 ISGRIFSESWDFFNETKGKVVLDLYSFGIMVKGCCDNNEMSKAFEVLGMVEQMGFCANVV 2166
            I    F ++W  FNETKG V LD+YSFGIM+KGCC+   + K FEVLG +E+MG   NVV
Sbjct: 141  IKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVV 200

Query: 2165 IYSSLIDGCCKNGEIGRARELFNEIRELGLVANQYTYTILINGFFKNDLKRNGFELFEKM 1986
            +Y++LIDGCCKNG+I R ++LF ++ EL +VANQYTYT+LINGFFK  LK++G EL+EKM
Sbjct: 201  VYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKM 260

Query: 1985 KSDGILPDLYTYNSVMNVYCKDCNVRMAFRLFGDMRERGVACNVVTYNVLLGGLFKEGRV 1806
            K  GI+P++YTYNS++   C D  +  AF LF +MRERGVACNVVTYN L+GGL +E RV
Sbjct: 261  KLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRV 320

Query: 1805 VGVERLLDQMRRDGLKPTVITYNILIDGFCNIGRFDKALSFFNQMKSAGLLPSLVTYNVL 1626
            +  ERL+ +M+RDGL P +I+YN LIDG+C+IG  DKA S FNQMKS+G  PSL TYN+L
Sbjct: 321  LEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNIL 380

Query: 1625 IAGFSKDGNPAKVAELVWEMEERGIPPTKVTYTILIDSFIRSNNMERALEVHSCMEKAGL 1446
            IAGFS+  N A V ++V EME RG+ P+KVTYTIL+D+ +RS+N+E+A +++S MEKAGL
Sbjct: 381  IAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGL 440

Query: 1445 IADICTYGVLVHGWCSQGNMKEASRVFRSMHAIGLQPNDVIYNMMIYGYCKENNSYRALR 1266
            +ADI  YGVL+HG C  G+MKEAS++F+S+  + L+PNDVIYN MIYGYCKE +SYRALR
Sbjct: 441  VADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALR 500

Query: 1265 LIKEMGENGMIPNMASYILTIEVLCKDGKLKEGQKLLNEMIKSGLEPSVSTVSMIFKAK 1089
            L+KEMGENGM+PN+ASY  TI++LCKD K  E + LL +MI+ GL+PS+S  +MI KA+
Sbjct: 501  LLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKAR 559



 Score = 41.2 bits (95), Expect(2) = e-155
 Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
 Frame = -2

Query: 2614 SMSLIPRMVKLPPLKALSLFNSST----HHSPXXXXXXXXXXXXXXXXXXXXXXXXXXXS 2447
            ++ L+P+MVK PPLKALSLF SS      H+                            S
Sbjct: 7    ALILLPKMVKSPPLKALSLFTSSALQGFQHTHQSISFILHLLISSNLFSHSQSLLLKLIS 66

Query: 2446 GRVEPSI---SSLINHLPP----SYAYSTALYEVIINAHVKSQV 2336
            G++  S    SSL + L      S+     ++E IINAHV+SQ+
Sbjct: 67   GQISSSSFTPSSLFHELTQPHLDSFPTHVLIHEAIINAHVRSQL 110



 Score =  151 bits (381), Expect = 1e-33
 Identities = 91/356 (25%), Positives = 163/356 (45%), Gaps = 34/356 (9%)
 Frame = -1

Query: 2048 LINGFFKNDLKRNGFELFEKMKSDGILPDLYTYNSVMNVYCKDCNVRMAFRLF------- 1890
            +IN   ++ L       F +M   G++P   T+N+++ +  K      A+R+F       
Sbjct: 101  IINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNV 160

Query: 1889 ---------------------------GDMRERGVACNVVTYNVLLGGLFKEGRVVGVER 1791
                                       G M E G++ NVV Y  L+ G  K G +   ++
Sbjct: 161  KLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQ 220

Query: 1790 LLDQMRRDGLKPTVITYNILIDGFCNIGRFDKALSFFNQMKSAGLLPSLVTYNVLIAGFS 1611
            L  +M    +     TY +LI+GF  +G     +  + +MK  G++P++ TYN +I    
Sbjct: 221  LFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCC 280

Query: 1610 KDGNPAKVAELVWEMEERGIPPTKVTYTILIDSFIRSNNMERALEVHSCMEKAGLIADIC 1431
             DG      EL  EM ERG+    VTY  LI    +   +  A  +   M++ GL  ++ 
Sbjct: 281  NDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLI 340

Query: 1430 TYGVLVHGWCSQGNMKEASRVFRSMHAIGLQPNDVIYNMMIYGYCKENNSYRALRLIKEM 1251
            +Y  L+ G+CS GN+ +AS +F  M + G  P+   YN++I G+ +  NS     +++EM
Sbjct: 341  SYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREM 400

Query: 1250 GENGMIPNMASYILTIEVLCKDGKLKEGQKLLNEMIKSGLEPSVSTVSMIFKAKCV 1083
               G+ P+  +Y + ++ L +   +++  ++ + M K+GL   +    ++    CV
Sbjct: 401  EARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCV 456



 Score =  133 bits (335), Expect = 2e-28
 Identities = 72/273 (26%), Positives = 141/273 (51%), Gaps = 1/273 (0%)
 Frame = -1

Query: 2357 CPCQISGRIFSESWDFFNETKGK-VVLDLYSFGIMVKGCCDNNEMSKAFEVLGMVEQMGF 2181
            C C   G++ + +++ F+E + + V  ++ ++  ++ G C    + +A  ++  +++ G 
Sbjct: 277  CRCCNDGKL-NNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGL 335

Query: 2180 CANVVIYSSLIDGCCKNGEIGRARELFNEIRELGLVANQYTYTILINGFFKNDLKRNGFE 2001
              N++ Y++LIDG C  G + +A  LFN+++  G   +  TY ILI GF +        +
Sbjct: 336  SPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTD 395

Query: 2000 LFEKMKSDGILPDLYTYNSVMNVYCKDCNVRMAFRLFGDMRERGVACNVVTYNVLLGGLF 1821
            +  +M++ G+ P   TY  +M+   +  N+  AF+++  M + G+  ++  Y VL+ GL 
Sbjct: 396  MVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLC 455

Query: 1820 KEGRVVGVERLLDQMRRDGLKPTVITYNILIDGFCNIGRFDKALSFFNQMKSAGLLPSLV 1641
              G +    +L   +    LKP  + YN +I G+C  G   +AL    +M   G++P++ 
Sbjct: 456  VVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVA 515

Query: 1640 TYNVLIAGFSKDGNPAKVAELVWEMEERGIPPT 1542
            +YN  I    KD    +   L+ +M E G+ P+
Sbjct: 516  SYNSTIQILCKDEKWTEAEVLLKDMIELGLKPS 548



 Score = 91.7 bits (226), Expect = 1e-15
 Identities = 62/248 (25%), Positives = 114/248 (45%)
 Frame = -1

Query: 1787 LDQMRRDGLKPTVITYNILIDGFCNIGRFDKALSFFNQMKSAGLLPSLVTYNVLIAGFSK 1608
            L Q   D     V+ +  +I+        ++AL +FNQM   GL+P   T+N L+    K
Sbjct: 83   LTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIK 142

Query: 1607 DGNPAKVAELVWEMEERGIPPTKVTYTILIDSFIRSNNMERALEVHSCMEKAGLIADICT 1428
              N  + A  V+   +  +     ++ I+I        +++  EV   ME+ GL  ++  
Sbjct: 143  S-NFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVV 201

Query: 1427 YGVLVHGWCSQGNMKEASRVFRSMHAIGLQPNDVIYNMMIYGYCKENNSYRALRLIKEMG 1248
            Y  L+ G C  G+++   ++F  M  + +  N   Y ++I G+ K       + L ++M 
Sbjct: 202  YTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMK 261

Query: 1247 ENGMIPNMASYILTIEVLCKDGKLKEGQKLLNEMIKSGLEPSVSTVSMIFKAKCVDK*EI 1068
              G++PN+ +Y   I   C DGKL    +L +EM + G+  +V T + +    C ++  +
Sbjct: 262  LTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVL 321

Query: 1067 FKKELAAR 1044
              + L  R
Sbjct: 322  EAERLMCR 329


>emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  535 bits (1379), Expect(2) = e-153
 Identities = 256/419 (61%), Positives = 331/419 (78%)
 Frame = -1

Query: 2345 ISGRIFSESWDFFNETKGKVVLDLYSFGIMVKGCCDNNEMSKAFEVLGMVEQMGFCANVV 2166
            I    F ++W  FNETKG V LD+YSFGIM+KGCC+   + K FEVLG +E+MG   NVV
Sbjct: 128  IKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVV 187

Query: 2165 IYSSLIDGCCKNGEIGRARELFNEIRELGLVANQYTYTILINGFFKNDLKRNGFELFEKM 1986
            +Y++LIDGCCKNG+I R ++LF ++ EL +VANQYTYT+LINGFFK  LK++G EL+EKM
Sbjct: 188  VYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKM 247

Query: 1985 KSDGILPDLYTYNSVMNVYCKDCNVRMAFRLFGDMRERGVACNVVTYNVLLGGLFKEGRV 1806
            K  GI+P++YTYNS++   C D  +  AF LF +MRERGVACNVVTYN L+GGL +E RV
Sbjct: 248  KLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRV 307

Query: 1805 VGVERLLDQMRRDGLKPTVITYNILIDGFCNIGRFDKALSFFNQMKSAGLLPSLVTYNVL 1626
            +  ERL+ +M+RDGL P +I+YN LIDG+C+IG  DKA S FNQMKS+G  PSL TYN+L
Sbjct: 308  LEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNIL 367

Query: 1625 IAGFSKDGNPAKVAELVWEMEERGIPPTKVTYTILIDSFIRSNNMERALEVHSCMEKAGL 1446
            IAGFS+  N A V ++V EME RG+ P+KVTYTIL+D+ +RS+N+E+A +++S MEKAGL
Sbjct: 368  IAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGL 427

Query: 1445 IADICTYGVLVHGWCSQGNMKEASRVFRSMHAIGLQPNDVIYNMMIYGYCKENNSYRALR 1266
            +ADI  YGVL+HG C  G+MKEAS++F+S+  + L+PNDVIYN MIYGYCKE +SYRALR
Sbjct: 428  VADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALR 487

Query: 1265 LIKEMGENGMIPNMASYILTIEVLCKDGKLKEGQKLLNEMIKSGLEPSVSTVSMIFKAK 1089
            L+KEMGENGM+PN+ASY  TI +LCKD K  E + LL +MI+ GL+PS+S  +MI KA+
Sbjct: 488  LLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKAR 546



 Score = 35.0 bits (79), Expect(2) = e-153
 Identities = 32/97 (32%), Positives = 41/97 (42%), Gaps = 11/97 (11%)
 Frame = -2

Query: 2593 MVKLPPLKALSLFNSST----HHSPXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRVEPSI 2426
            MVK PPLKALSLF SS      H+                            SG++  S 
Sbjct: 1    MVKSPPLKALSLFTSSALQGXQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSS 60

Query: 2425 ---SSLINHLPP----SYAYSTALYEVIINAHVKSQV 2336
               SSL + L      S+     ++E IINAHV+SQ+
Sbjct: 61   FTPSSLFHELTQPHLDSFPTHVLIHEAIINAHVRSQL 97



 Score =  148 bits (374), Expect = 7e-33
 Identities = 90/356 (25%), Positives = 162/356 (45%), Gaps = 34/356 (9%)
 Frame = -1

Query: 2048 LINGFFKNDLKRNGFELFEKMKSDGILPDLYTYNSVMNVYCKDCNVRMAFRLF------- 1890
            +IN   ++ L         +M   G++P   T+N+++ +  K      A+R+F       
Sbjct: 88   IINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNV 147

Query: 1889 ---------------------------GDMRERGVACNVVTYNVLLGGLFKEGRVVGVER 1791
                                       G M E G++ NVV Y  L+ G  K G +   ++
Sbjct: 148  KLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQ 207

Query: 1790 LLDQMRRDGLKPTVITYNILIDGFCNIGRFDKALSFFNQMKSAGLLPSLVTYNVLIAGFS 1611
            L  +M    +     TY +LI+GF  +G     +  + +MK  G++P++ TYN +I    
Sbjct: 208  LFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCC 267

Query: 1610 KDGNPAKVAELVWEMEERGIPPTKVTYTILIDSFIRSNNMERALEVHSCMEKAGLIADIC 1431
             DG      EL  EM ERG+    VTY  LI    +   +  A  +   M++ GL  ++ 
Sbjct: 268  NDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLI 327

Query: 1430 TYGVLVHGWCSQGNMKEASRVFRSMHAIGLQPNDVIYNMMIYGYCKENNSYRALRLIKEM 1251
            +Y  L+ G+CS GN+ +AS +F  M + G  P+   YN++I G+ +  NS     +++EM
Sbjct: 328  SYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREM 387

Query: 1250 GENGMIPNMASYILTIEVLCKDGKLKEGQKLLNEMIKSGLEPSVSTVSMIFKAKCV 1083
               G+ P+  +Y + ++ L +   +++  ++ + M K+GL   +    ++    CV
Sbjct: 388  EARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCV 443



 Score =  133 bits (335), Expect = 2e-28
 Identities = 72/273 (26%), Positives = 141/273 (51%), Gaps = 1/273 (0%)
 Frame = -1

Query: 2357 CPCQISGRIFSESWDFFNETKGK-VVLDLYSFGIMVKGCCDNNEMSKAFEVLGMVEQMGF 2181
            C C   G++ + +++ F+E + + V  ++ ++  ++ G C    + +A  ++  +++ G 
Sbjct: 264  CRCCNDGKL-NNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGL 322

Query: 2180 CANVVIYSSLIDGCCKNGEIGRARELFNEIRELGLVANQYTYTILINGFFKNDLKRNGFE 2001
              N++ Y++LIDG C  G + +A  LFN+++  G   +  TY ILI GF +        +
Sbjct: 323  SPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTD 382

Query: 2000 LFEKMKSDGILPDLYTYNSVMNVYCKDCNVRMAFRLFGDMRERGVACNVVTYNVLLGGLF 1821
            +  +M++ G+ P   TY  +M+   +  N+  AF+++  M + G+  ++  Y VL+ GL 
Sbjct: 383  MVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLC 442

Query: 1820 KEGRVVGVERLLDQMRRDGLKPTVITYNILIDGFCNIGRFDKALSFFNQMKSAGLLPSLV 1641
              G +    +L   +    LKP  + YN +I G+C  G   +AL    +M   G++P++ 
Sbjct: 443  VVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVA 502

Query: 1640 TYNVLIAGFSKDGNPAKVAELVWEMEERGIPPT 1542
            +YN  I    KD    +   L+ +M E G+ P+
Sbjct: 503  SYNSTIXILCKDEKWTEAEVLLKDMIELGLKPS 535



 Score = 89.0 bits (219), Expect = 7e-15
 Identities = 61/248 (24%), Positives = 113/248 (45%)
 Frame = -1

Query: 1787 LDQMRRDGLKPTVITYNILIDGFCNIGRFDKALSFFNQMKSAGLLPSLVTYNVLIAGFSK 1608
            L Q   D     V+ +  +I+        ++AL + NQM   GL+P   T+N L+    K
Sbjct: 70   LTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIK 129

Query: 1607 DGNPAKVAELVWEMEERGIPPTKVTYTILIDSFIRSNNMERALEVHSCMEKAGLIADICT 1428
              N  + A  V+   +  +     ++ I+I        +++  EV   ME+ GL  ++  
Sbjct: 130  S-NFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVV 188

Query: 1427 YGVLVHGWCSQGNMKEASRVFRSMHAIGLQPNDVIYNMMIYGYCKENNSYRALRLIKEMG 1248
            Y  L+ G C  G+++   ++F  M  + +  N   Y ++I G+ K       + L ++M 
Sbjct: 189  YTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMK 248

Query: 1247 ENGMIPNMASYILTIEVLCKDGKLKEGQKLLNEMIKSGLEPSVSTVSMIFKAKCVDK*EI 1068
              G++PN+ +Y   I   C DGKL    +L +EM + G+  +V T + +    C ++  +
Sbjct: 249  LTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVL 308

Query: 1067 FKKELAAR 1044
              + L  R
Sbjct: 309  EAERLMCR 316


>ref|XP_002302937.1| predicted protein [Populus trichocarpa] gi|222844663|gb|EEE82210.1|
            predicted protein [Populus trichocarpa]
          Length = 564

 Score =  507 bits (1305), Expect(2) = e-148
 Identities = 239/419 (57%), Positives = 323/419 (77%)
 Frame = -1

Query: 2345 ISGRIFSESWDFFNETKGKVVLDLYSFGIMVKGCCDNNEMSKAFEVLGMVEQMGFCANVV 2166
            +    F ++W FFNE K +V  D+YSFGIM+KGCC+N  + K+F++LG+++ MG   NVV
Sbjct: 139  VRSNCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVV 198

Query: 2165 IYSSLIDGCCKNGEIGRARELFNEIRELGLVANQYTYTILINGFFKNDLKRNGFELFEKM 1986
            IY++LIDGCCKNG+I RAR  F+++ E+GLVANQYT+T+LING FK  LK++GF+LFEKM
Sbjct: 199  IYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKM 258

Query: 1985 KSDGILPDLYTYNSVMNVYCKDCNVRMAFRLFGDMRERGVACNVVTYNVLLGGLFKEGRV 1806
            K +G+ P+LYTYN +MN YC +  +  AF LF +MRERGV  NVVTYN L+GG+ +E RV
Sbjct: 259  KINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERV 318

Query: 1805 VGVERLLDQMRRDGLKPTVITYNILIDGFCNIGRFDKALSFFNQMKSAGLLPSLVTYNVL 1626
               E+L+DQM++  + P +ITYN LI GFC++G  DKA S  +Q+KS GL PSLVTYN+L
Sbjct: 319  WEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNIL 378

Query: 1625 IAGFSKDGNPAKVAELVWEMEERGIPPTKVTYTILIDSFIRSNNMERALEVHSCMEKAGL 1446
            I G+SK GN   VA+L  EME RGI P+KVT T+LID+++R   ME+A +++S MEK GL
Sbjct: 379  IEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGL 438

Query: 1445 IADICTYGVLVHGWCSQGNMKEASRVFRSMHAIGLQPNDVIYNMMIYGYCKENNSYRALR 1266
            + D+  YGVL+HG C +GNMKE+S++FRSM  + ++P+DVIYN MI+GYCKE+NSYRALR
Sbjct: 439  VPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALR 498

Query: 1265 LIKEMGENGMIPNMASYILTIEVLCKDGKLKEGQKLLNEMIKSGLEPSVSTVSMIFKAK 1089
            L++EM   G++PN+ASY   I VLCKDGK +E + LL++MI+  L+PS S ++MI KAK
Sbjct: 499  LLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMISKAK 557



 Score = 47.8 bits (112), Expect(2) = e-148
 Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
 Frame = -2

Query: 2614 SMSLIPRMVKLPPLKALSLFNSS-------THHSPXXXXXXXXXXXXXXXXXXXXXXXXX 2456
            ++ LI +MVK+PPL+ALSLFNSS       THHS                          
Sbjct: 6    ALILIQKMVKIPPLQALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILS 65

Query: 2455 XXSGRVEPSISSLINHLPPSY--AYSTA-LYEVIINAHVKSQV 2336
                    ++ SL++HL  +   + +TA LYE IINAH+KSQ+
Sbjct: 66   NKISSPFFTVPSLLHHLTQNQNPSMTTALLYESIINAHLKSQL 108



 Score =  111 bits (278), Expect = 9e-22
 Identities = 74/257 (28%), Positives = 123/257 (47%), Gaps = 34/257 (13%)
 Frame = -1

Query: 1754 TVITYNILIDGFCNIGRFDKALSFFNQMKSAG----------LLPSLV------------ 1641
            T + Y  +I+        DKAL FFN+M   G          LL SLV            
Sbjct: 92   TALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFF 151

Query: 1640 ------------TYNVLIAGFSKDGNPAKVAELVWEMEERGIPPTKVTYTILIDSFIRSN 1497
                        ++ ++I G  ++GN  K  +L+  +++ G+ P  V YT LID   ++ 
Sbjct: 152  NELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNG 211

Query: 1496 NMERALEVHSCMEKAGLIADICTYGVLVHGWCSQGNMKEASRVFRSMHAIGLQPNDVIYN 1317
            ++ERA      M + GL+A+  T+ VL++G   +G  K+   +F  M   GL PN   YN
Sbjct: 212  DIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYN 271

Query: 1316 MMIYGYCKENNSYRALRLIKEMGENGMIPNMASYILTIEVLCKDGKLKEGQKLLNEMIKS 1137
             ++  YC E    RA  L  EM E G+  N+ +Y   I  +C++ ++ E +KL+++M K+
Sbjct: 272  CLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKA 331

Query: 1136 GLEPSVSTVSMIFKAKC 1086
             + P++ T + +    C
Sbjct: 332  AVSPNLITYNTLIGGFC 348


>ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g11690 gi|4539460|emb|CAB39940.1| putative protein
            [Arabidopsis thaliana] gi|7267869|emb|CAB78212.1|
            putative protein [Arabidopsis thaliana]
            gi|91806660|gb|ABE66057.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
            gi|332657639|gb|AEE83039.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  506 bits (1302), Expect(2) = e-144
 Identities = 235/414 (56%), Positives = 322/414 (77%)
 Frame = -1

Query: 2330 FSESWDFFNETKGKVVLDLYSFGIMVKGCCDNNEMSKAFEVLGMVEQMGFCANVVIYSSL 2151
            F++ W FFNE K KVVLD+YSFGI++KGCC+  E+ K+F++L  + + GF  NVVIY++L
Sbjct: 145  FNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTL 204

Query: 2150 IDGCCKNGEIGRARELFNEIRELGLVANQYTYTILINGFFKNDLKRNGFELFEKMKSDGI 1971
            IDGCCK GEI +A++LF E+ +LGLVAN+ TYT+LING FKN +K+ GFE++EKM+ DG+
Sbjct: 205  IDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGV 264

Query: 1970 LPDLYTYNSVMNVYCKDCNVRMAFRLFGDMRERGVACNVVTYNVLLGGLFKEGRVVGVER 1791
             P+LYTYN VMN  CKD   + AF++F +MRERGV+CN+VTYN L+GGL +E ++    +
Sbjct: 265  FPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANK 324

Query: 1790 LLDQMRRDGLKPTVITYNILIDGFCNIGRFDKALSFFNQMKSAGLLPSLVTYNVLIAGFS 1611
            ++DQM+ DG+ P +ITYN LIDGFC +G+  KALS    +KS GL PSLVTYN+L++GF 
Sbjct: 325  VVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFC 384

Query: 1610 KDGNPAKVAELVWEMEERGIPPTKVTYTILIDSFIRSNNMERALEVHSCMEKAGLIADIC 1431
            + G+ +  A++V EMEERGI P+KVTYTILID+F RS+NME+A+++   ME+ GL+ D+ 
Sbjct: 385  RKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVH 444

Query: 1430 TYGVLVHGWCSQGNMKEASRVFRSMHAIGLQPNDVIYNMMIYGYCKENNSYRALRLIKEM 1251
            TY VL+HG+C +G M EASR+F+SM     +PN+VIYN MI GYCKE +SYRAL+L+KEM
Sbjct: 445  TYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEM 504

Query: 1250 GENGMIPNMASYILTIEVLCKDGKLKEGQKLLNEMIKSGLEPSVSTVSMIFKAK 1089
             E  + PN+ASY   IEVLCK+ K KE ++L+ +MI SG++PS S +S+I +AK
Sbjct: 505  EEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAK 558



 Score = 35.8 bits (81), Expect(2) = e-144
 Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
 Frame = -2

Query: 2614 SMSLIPRMVKLPPLKALSLFNSST----HHSPXXXXXXXXXXXXXXXXXXXXXXXXXXXS 2447
            ++ L+  ++K PPLKA SL NS       H+                            S
Sbjct: 8    TLVLLANLIKFPPLKAFSLLNSPNFHEFQHTHESISILLRLLLSGNLFSHAQSLLLQVIS 67

Query: 2446 GRVEPSI---SSLINHLPPSYAYSTA--LYEVIINAHVKSQ 2339
            G++       SSL+++L  S    T   LYEVIIN++V+SQ
Sbjct: 68   GKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQ 108



 Score =  169 bits (428), Expect = 4e-39
 Identities = 96/361 (26%), Positives = 180/361 (49%)
 Frame = -1

Query: 2165 IYSSLIDGCCKNGEIGRARELFNEIRELGLVANQYTYTILINGFFKNDLKRNGFELFEKM 1986
            +Y  +I+   ++  +  +   FNE+ + G V     +  L+     +      +  F + 
Sbjct: 96   LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155

Query: 1985 KSDGILPDLYTYNSVMNVYCKDCNVRMAFRLFGDMRERGVACNVVTYNVLLGGLFKEGRV 1806
            KS  +L D+Y++  ++   C+   +  +F L  ++ E G + NVV Y  L+ G  K+G +
Sbjct: 156  KSKVVL-DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 1805 VGVERLLDQMRRDGLKPTVITYNILIDGFCNIGRFDKALSFFNQMKSAGLLPSLVTYNVL 1626
               + L  +M + GL     TY +LI+G    G   +    + +M+  G+ P+L TYN +
Sbjct: 215  EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 1625 IAGFSKDGNPAKVAELVWEMEERGIPPTKVTYTILIDSFIRSNNMERALEVHSCMEKAGL 1446
            +    KDG      ++  EM ERG+    VTY  LI    R   +  A +V   M+  G+
Sbjct: 275  MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334

Query: 1445 IADICTYGVLVHGWCSQGNMKEASRVFRSMHAIGLQPNDVIYNMMIYGYCKENNSYRALR 1266
              ++ TY  L+ G+C  G + +A  + R + + GL P+ V YN+++ G+C++ ++  A +
Sbjct: 335  NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394

Query: 1265 LIKEMGENGMIPNMASYILTIEVLCKDGKLKEGQKLLNEMIKSGLEPSVSTVSMIFKAKC 1086
            ++KEM E G+ P+  +Y + I+   +   +++  +L   M + GL P V T S++    C
Sbjct: 395  MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454

Query: 1085 V 1083
            +
Sbjct: 455  I 455



 Score = 79.7 bits (195), Expect = 4e-12
 Identities = 43/164 (26%), Positives = 84/164 (51%)
 Frame = -1

Query: 1571 EMEERGIPPTKVTYTILIDSFIRSNNMERALEVHSCMEKAGLIADICTYGVLVHGWCSQG 1392
            EM + G  P    +  L+   + S++  +     +   K+ ++ D+ ++G+L+ G C  G
Sbjct: 119  EMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFN-ENKSKVVLDVYSFGILIKGCCEAG 177

Query: 1391 NMKEASRVFRSMHAIGLQPNDVIYNMMIYGYCKENNSYRALRLIKEMGENGMIPNMASYI 1212
             ++++  +   +   G  PN VIY  +I G CK+    +A  L  EMG+ G++ N  +Y 
Sbjct: 178  EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYT 237

Query: 1211 LTIEVLCKDGKLKEGQKLLNEMIKSGLEPSVSTVSMIFKAKCVD 1080
            + I  L K+G  K+G ++  +M + G+ P++ T + +    C D
Sbjct: 238  VLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281


>ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297332932|gb|EFH63350.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 568

 Score =  492 bits (1267), Expect(2) = e-140
 Identities = 230/414 (55%), Positives = 318/414 (76%)
 Frame = -1

Query: 2330 FSESWDFFNETKGKVVLDLYSFGIMVKGCCDNNEMSKAFEVLGMVEQMGFCANVVIYSSL 2151
            F++ W FFNE+K KV LD+YSFGI++KGCC+  E+ K+F++L  + + GF  NVVIY++L
Sbjct: 145  FNQWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTL 204

Query: 2150 IDGCCKNGEIGRARELFNEIRELGLVANQYTYTILINGFFKNDLKRNGFELFEKMKSDGI 1971
            IDGCCK GEI +A++LF E+ + GLVAN++TYT+LI+G FKN +K+ GFE++EKM+ DG+
Sbjct: 205  IDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGV 264

Query: 1970 LPDLYTYNSVMNVYCKDCNVRMAFRLFGDMRERGVACNVVTYNVLLGGLFKEGRVVGVER 1791
             P+LYTYN VMN +CKD   + AF+LF +MRERGV+CN+VTYN L+GGL +E +     +
Sbjct: 265  FPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANK 324

Query: 1790 LLDQMRRDGLKPTVITYNILIDGFCNIGRFDKALSFFNQMKSAGLLPSLVTYNVLIAGFS 1611
            ++DQM+ DG+ P +ITYN LIDGFC +G+  KALS    +KS GL PSLVTYN+L++GF 
Sbjct: 325  VMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFC 384

Query: 1610 KDGNPAKVAELVWEMEERGIPPTKVTYTILIDSFIRSNNMERALEVHSCMEKAGLIADIC 1431
            K G+ +   ++V EMEERGI P+K+TYTILID+F R +NME+A+++ S ME+ GL  D+ 
Sbjct: 385  KKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVH 444

Query: 1430 TYGVLVHGWCSQGNMKEASRVFRSMHAIGLQPNDVIYNMMIYGYCKENNSYRALRLIKEM 1251
            TY VL+HG+C +G M EASR+F+ M A  L+PN VIYN M+ GYCKE +SYRALRL +EM
Sbjct: 445  TYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREM 504

Query: 1250 GENGMIPNMASYILTIEVLCKDGKLKEGQKLLNEMIKSGLEPSVSTVSMIFKAK 1089
             E  + PN+ASY   IEVLCK+ K KE + L+ +MI +G++PS S +++I +AK
Sbjct: 505  EEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLISRAK 558



 Score = 35.4 bits (80), Expect(2) = e-140
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
 Frame = -2

Query: 2614 SMSLIPRMVKLPPLKALSLFNSST----HHSPXXXXXXXXXXXXXXXXXXXXXXXXXXXS 2447
            ++ L+  ++K+PPLKA SL NS       H+                            S
Sbjct: 8    TLILLATLIKVPPLKAFSLLNSPNFHGFQHTHESISILLRLLLSGNLYSHAQSLLLQVIS 67

Query: 2446 GRVEPSI---SSLINHLPPSYAYSTA--LYEVIINAHVKSQ 2339
            G+++      SSL++++  S    T   LYEV+INA+V+SQ
Sbjct: 68   GKIQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQ 108



 Score =  112 bits (279), Expect = 7e-22
 Identities = 66/253 (26%), Positives = 116/253 (45%), Gaps = 34/253 (13%)
 Frame = -1

Query: 1742 YNILIDGFCNIGRFDKALSFFNQMKSAGLLP----------------------------- 1650
            Y ++I+ +      D ++S+FN+M   G +P                             
Sbjct: 97   YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 1649 -----SLVTYNVLIAGFSKDGNPAKVAELVWEMEERGIPPTKVTYTILIDSFIRSNNMER 1485
                  + ++ ++I G  + G   K  +L+ E+ E G  P  V YT LID   +   +E+
Sbjct: 157  IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEK 216

Query: 1484 ALEVHSCMEKAGLIADICTYGVLVHGWCSQGNMKEASRVFRSMHAIGLQPNDVIYNMMIY 1305
            A ++   M K GL+A+  TY VL+HG    G  K+   ++  M   G+ PN   YN ++ 
Sbjct: 217  AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276

Query: 1304 GYCKENNSYRALRLIKEMGENGMIPNMASYILTIEVLCKDGKLKEGQKLLNEMIKSGLEP 1125
             +CK+  +  A +L  EM E G+  N+ +Y   I  LC++ K  E  K++++M   G+ P
Sbjct: 277  QHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINP 336

Query: 1124 SVSTVSMIFKAKC 1086
            ++ T + +    C
Sbjct: 337  NLITYNTLIDGFC 349