BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00003366
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABL97980.1| 30S ribosomal protein S10-like [Brassica rapa]         246   6e-63
gb|ABB97026.1| unknown [Brassica rapa]                                242   1e-61
ref|NP_187919.1| 30S ribosomal protein S10 [Arabidopsis thaliana...   242   1e-61
ref|XP_002884945.1| hypothetical protein ARALYDRAFT_478688 [Arab...   241   3e-61
sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, ...   240   4e-61

>gb|ABL97980.1| 30S ribosomal protein S10-like [Brassica rapa]
          Length = 193

 Score =  246 bits (628), Expect = 6e-63
 Identities = 127/178 (71%), Positives = 144/178 (80%), Gaps = 12/178 (6%)
 Frame = -3

Query: 855 SPTISSKPNISLFSFPPSK-----FQSLTSSRPS--FTRVFSAPEVL-----DSSLEVQA 712
           +PT S++  +SL S  PS        S   ++PS  FT+VF+APE L     D     + 
Sbjct: 16  NPTSSTRQKVSLLSLLPSSSTHGGIGSCVFNKPSVSFTKVFAAPETLTPETLDEPTSEEF 75

Query: 711 SEAPDTNSLSIDSDKMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPT 532
           +E P ++S+S+D+DKMAPKQKIRIKLRSYWVPLIEDSCKQI+DAAR TNAKTMGPVPLPT
Sbjct: 76  AEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPT 135

Query: 531 KKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 358
           KKRIYCVLKSPHVHKDARFHFEIRTHQR+IDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 136 KKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 193


>gb|ABB97026.1| unknown [Brassica rapa]
          Length = 190

 Score =  242 bits (617), Expect = 1e-61
 Identities = 127/178 (71%), Positives = 148/178 (83%), Gaps = 8/178 (4%)
 Frame = -3

Query: 867 PLCNSPTISS--KPNISLFSFPPSKFQSLTS--SRPSFT---RVFSAPEVLD-SSLEVQA 712
           P  ++PT SS  +  +SL S  P+   + +S  ++PS +   R+F+APE L   +L+   
Sbjct: 13  PSFSNPTSSSSTRQKLSLLSLLPTHGVTGSSLINKPSVSFTKRIFAAPETLSPETLDEPV 72

Query: 711 SEAPDTNSLSIDSDKMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPT 532
           SE P ++S+S+D+DKMAPKQKIRIKLRSYWVPLIEDSCKQI+DAAR TNAKTMGPVPLPT
Sbjct: 73  SEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPT 132

Query: 531 KKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 358
           KKRIYCVLKSPHVHKDARFHFEIRTHQR+IDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 133 KKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 190


>ref|NP_187919.1| 30S ribosomal protein S10 [Arabidopsis thaliana]
           gi|334185302|ref|NP_001189875.1| 30S ribosomal protein
           S10 [Arabidopsis thaliana]
           gi|75311242|sp|Q9LK61.1|RR10_ARATH RecName: Full=30S
           ribosomal protein S10, chloroplastic; Flags: Precursor
           gi|14326495|gb|AAK60293.1|AF385700_1 AT3g13120/MJG19_6
           [Arabidopsis thaliana]
           gi|16226587|gb|AAL16207.1|AF428438_1 AT3g13120/MJG19_6
           [Arabidopsis thaliana] gi|10172599|dbj|BAB01403.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|19548033|gb|AAL87380.1| AT3g13120/MJG19_6
           [Arabidopsis thaliana] gi|332641777|gb|AEE75298.1| 30S
           ribosomal protein S10 [Arabidopsis thaliana]
           gi|332641778|gb|AEE75299.1| 30S ribosomal protein S10
           [Arabidopsis thaliana]
          Length = 191

 Score =  242 bits (617), Expect = 1e-61
 Identities = 119/147 (80%), Positives = 131/147 (89%), Gaps = 3/147 (2%)
 Frame = -3

Query: 789 LTSSRPSFTRVFSAPEVLDSSLEV---QASEAPDTNSLSIDSDKMAPKQKIRIKLRSYWV 619
           LT    S T+VF+ P+ LD + E+    ASE P ++S+S+D+DKMAPKQKIRIKLRSYWV
Sbjct: 45  LTKPSVSLTKVFAVPDTLDPTPEILDEPASEVPSSSSISVDADKMAPKQKIRIKLRSYWV 104

Query: 618 PLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID 439
           PLIEDSCKQI+DAAR TNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQR+ID
Sbjct: 105 PLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMID 164

Query: 438 ILYPTAQTIDSLMQLDLPAGVDVEVKL 358
           ILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 165 ILYPTAQTIDSLMQLDLPAGVDVEVKL 191


>ref|XP_002884945.1| hypothetical protein ARALYDRAFT_478688 [Arabidopsis lyrata subsp.
           lyrata] gi|297330785|gb|EFH61204.1| hypothetical protein
           ARALYDRAFT_478688 [Arabidopsis lyrata subsp. lyrata]
          Length = 191

 Score =  241 bits (614), Expect = 3e-61
 Identities = 119/147 (80%), Positives = 130/147 (88%), Gaps = 3/147 (2%)
 Frame = -3

Query: 789 LTSSRPSFTRVFSAPEVLDSSLEV---QASEAPDTNSLSIDSDKMAPKQKIRIKLRSYWV 619
           LT    S T+V + PE LD + E+    ASE P ++S+S+D+DKMAPKQKIRIKLRSYWV
Sbjct: 45  LTKPSVSLTKVIAVPETLDPTPEILDEPASEVPSSSSISVDADKMAPKQKIRIKLRSYWV 104

Query: 618 PLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID 439
           PLIEDSCKQI+DAAR TNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQR+ID
Sbjct: 105 PLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMID 164

Query: 438 ILYPTAQTIDSLMQLDLPAGVDVEVKL 358
           ILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 165 ILYPTAQTIDSLMQLDLPAGVDVEVKL 191


>sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, chloroplastic; Flags:
           Precursor gi|188036211|pdb|3BBN|J Chain J, Homology
           Model For The Spinach Chloroplast 30s Subunit Fitted To
           9.4a Cryo-Em Map Of The 70s Chlororibosome.
           gi|7578929|gb|AAF64190.1|AF245665_1 plastid ribosomal
           protein S10 precursor [Mesembryanthemum crystallinum]
          Length = 197

 Score =  240 bits (613), Expect = 4e-61
 Identities = 131/182 (71%), Positives = 142/182 (78%), Gaps = 13/182 (7%)
 Frame = -3

Query: 864 LCNSPTISSKPNISLFSFPPS--------KFQSLTSSRPSFTRVFSAPEVLDSSL---EV 718
           L NS +  +KP +S  S   S           S +SS  S  RVF+APEVL+S     E 
Sbjct: 16  LSNSSSFPNKPQVSNLSLHSSLSNLRRTLSHSSPSSSSSSNVRVFAAPEVLESQETGPES 75

Query: 717 QASEAPDTNSLSI--DSDKMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPV 544
              E  +T++L I  DSD+MAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPV
Sbjct: 76  YVEEGSETSALGIGADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPV 135

Query: 543 PLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEV 364
           PLPTKKRI+CVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEV
Sbjct: 136 PLPTKKRIFCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEV 195

Query: 363 KL 358
           KL
Sbjct: 196 KL 197