BLASTX nr result
ID: Angelica22_contig00003256
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00003256
(1741 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002513582.1| polypyrimidine tract binding protein, putati... 671 0.0
gb|ABK95840.1| unknown [Populus trichocarpa] 669 0.0
ref|XP_004145983.1| PREDICTED: polypyrimidine tract-binding prot... 660 0.0
ref|XP_002322027.1| predicted protein [Populus trichocarpa] gi|2... 660 0.0
ref|XP_004168482.1| PREDICTED: polypyrimidine tract-binding prot... 655 0.0
>ref|XP_002513582.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223547490|gb|EEF48985.1| polypyrimidine tract binding
protein, putative [Ricinus communis]
Length = 447
Score = 671 bits (1731), Expect = 0.0
Identities = 337/430 (78%), Positives = 373/430 (86%), Gaps = 1/430 (0%)
Frame = +1
Query: 163 MSAVSSQPQFRYTQPPSKVLHLRNLPWECTEDELIELGKPFGKVVNTKCNVGANRNQAFI 342
M++VSSQPQFR TQPPSKVLHLRNLPWECTE+ELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1 MASVSSQPQFRLTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
Query: 343 EFAELNQAIAMISYFASSSEAAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGN 522
EF +LNQAIAMISY+ASSSE AQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEG
Sbjct: 61 EFMDLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGA 120
Query: 523 DARLVSIEVLHVVFSAFGFVHKITTFEKTAGFQALVQFTDSETASSAKDALDGRSIPSYL 702
DARLVSI+VLH+VFSAFGFVHKITTFEKTAGFQALVQF+D+ETASSAK+ALDGR+IP YL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRNIPRYL 180
Query: 703 IPE-LSPCSLKITYSAHTDLSVKFQSHRSRDYTNPSLPVNPSAIDVTGQMSMGLDGKRLE 879
+PE + PC+L+ITYSAHTDLSVKFQSHRSRDYTNP+LPV PSAID +G ++GLDGK+LE
Sbjct: 181 LPEHIGPCTLRITYSAHTDLSVKFQSHRSRDYTNPNLPVAPSAIDGSGMFTVGLDGKKLE 240
Query: 880 PESNVLLASIENMPYELTLDVLHTVFSTFGTVLKIAMFDKNGGIQALVQYPDVQTAVVAK 1059
PESNVLLASIENM Y +TLDVLH VFS FG V KIAMFDKNGG+QAL+QYPDVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 300
Query: 1060 QALEGHCIYDGGYCKLHISYSRHTDLSIKVNNDRSRDYTIPIAPMLSTQPSMLGQPPSQP 1239
+ALEGHCIYDGG+CKLHISYSRH+DLSIKVNNDRSRDYTIP M++ QPS+LGQ QP
Sbjct: 301 EALEGHCIYDGGFCKLHISYSRHSDLSIKVNNDRSRDYTIPNPAMVNPQPSILGQ---QP 357
Query: 1240 PSVLGPGGPQYNGAQFAPVHQGHAMPLPPSGWNSGVPAVPQSMQGQMHTHHYMPPANMLS 1419
+GP Y+GAQFAP + MP P +GW + VPA P SM QM+ H Y P M
Sbjct: 358 VPTVGPPAHPYSGAQFAPHTEHPVMPQPSAGWTAAVPAGPHSMPPQMNNHPYFPSGAMPP 417
Query: 1420 EYGHAMMHSP 1449
+ G MM P
Sbjct: 418 QMGPGMMQMP 427
>gb|ABK95840.1| unknown [Populus trichocarpa]
Length = 442
Score = 669 bits (1725), Expect = 0.0
Identities = 340/441 (77%), Positives = 376/441 (85%), Gaps = 1/441 (0%)
Frame = +1
Query: 163 MSAVSSQPQFRYTQPPSKVLHLRNLPWECTEDELIELGKPFGKVVNTKCNVGANRNQAFI 342
MS+VSSQPQFR TQPPSKVLHLRNLPWECTE+EL+ELGKPFGKVVNTKCNVG NRNQAFI
Sbjct: 1 MSSVSSQPQFRLTQPPSKVLHLRNLPWECTEEELVELGKPFGKVVNTKCNVGPNRNQAFI 60
Query: 343 EFAELNQAIAMISYFASSSEAAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGN 522
EF++LNQAIAMISY+ASSSE AQVRGKTVYLQYSNRQEIVNNKTTADV GNVLLVTIEG
Sbjct: 61 EFSDLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVGGNVLLVTIEGA 120
Query: 523 DARLVSIEVLHVVFSAFGFVHKITTFEKTAGFQALVQFTDSETASSAKDALDGRSIPSYL 702
DARLVSI+VLH+VFSAFGFVHKITTFEKTAGFQALVQF+D+ETASSAK+ALDGR+IPSYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRNIPSYL 180
Query: 703 IPE-LSPCSLKITYSAHTDLSVKFQSHRSRDYTNPSLPVNPSAIDVTGQMSMGLDGKRLE 879
+PE L PC+L+ITYSAHTDLSVKFQSHRSRDYTN +LPV PSAID G S+GLDGK+LE
Sbjct: 181 LPEHLGPCTLRITYSAHTDLSVKFQSHRSRDYTNANLPVAPSAIDANGMFSVGLDGKKLE 240
Query: 880 PESNVLLASIENMPYELTLDVLHTVFSTFGTVLKIAMFDKNGGIQALVQYPDVQTAVVAK 1059
PESNVLLASIENM Y +TLDVLH VFS+FG V KIAMFDKNGG+QAL+QYPDVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLDVLHMVFSSFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 300
Query: 1060 QALEGHCIYDGGYCKLHISYSRHTDLSIKVNNDRSRDYTIPIAPMLSTQPSMLGQPPSQP 1239
+ALEGHCIYDGG+CKLH+SYSRH+DLSIKVNNDRSRDYTIP M++ QPS+LGQ QP
Sbjct: 301 EALEGHCIYDGGFCKLHLSYSRHSDLSIKVNNDRSRDYTIPNTVMMNPQPSILGQ---QP 357
Query: 1240 PSVLGPGGPQYNGAQFAPVHQGHAMPLPPSGWNSGVPAVPQSMQGQMHTHHYMPPANMLS 1419
+ GP Y GAQ HQ MP P +GW +G P VP SM QM+ + Y+PP M
Sbjct: 358 VATHGPPAHTYPGAQH---HQ--MMPQPSAGWATGGPPVPHSMPAQMNNNPYLPPGTMPP 412
Query: 1420 EYGHAMMHSPNSFHPAGSYPH 1482
+ GH MM PN G PH
Sbjct: 413 QMGHGMMQMPNH----GGLPH 429
>ref|XP_004145983.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Cucumis sativus]
Length = 776
Score = 660 bits (1702), Expect = 0.0
Identities = 339/450 (75%), Positives = 377/450 (83%), Gaps = 10/450 (2%)
Frame = +1
Query: 163 MSAVSSQPQFRYTQPPSKVLHLRNLPWECTEDELIELGKPFGKVVNTKCNVGANRNQAFI 342
M++VSSQPQFRYTQPPSKVLHLRNLPWECTE+ELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 324 MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 383
Query: 343 EFAELNQAIAMISYFASSSEAAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGN 522
EFA++NQAIAMISY+ASSSE AQVRGKTVYLQYSNRQEIVNNKTTADV GNVLLVTIEG
Sbjct: 384 EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 443
Query: 523 DARLVSIEVLHVVFSAFGFVHKITTFEKTAGFQALVQFTDSETASSAKDALDGRSIPSYL 702
DARLVSI+VLH+VFSAFGFVHKITTFEKTAGFQALVQF+D+ETASSAK+ALDGRSIP YL
Sbjct: 444 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 503
Query: 703 IPE-LSPCSLKITYSAHTDLSVKFQSHRSRDYTNPSLPVNPSAIDVTGQMSMGLDGKRLE 879
+P+ + PCSL+ITYSAHTDL+VKFQSHRSRDYTNP LPV PSAID +GQ ++GLDGK+LE
Sbjct: 504 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 563
Query: 880 PESNVLLASIENMPYELTLDVLHTVFSTFGTVLKIAMFDKNGGIQALVQYPDVQTAVVAK 1059
PESNVLLASIENM Y +TL+VLH VFS FG V KIAMFDKNGG+QAL+QYPDVQTAVVAK
Sbjct: 564 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 623
Query: 1060 QALEGHCIYDGGYCKLHISYSRHTDLSIKVNNDRSRDYTIP-IAPMLSTQPSMLGQPPSQ 1236
+ALEGHCIYDGG+CKLHISYSRHTDLSIKVNNDRSRDYTIP PM+++QP ++GQ P Q
Sbjct: 624 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQGPGQ 683
Query: 1237 ------PPSVLGPGGPQYNGAQFAPVHQGHAMPLPP--SGWNSGVPAVPQSMQGQMHTHH 1392
P ++GP QYNG Q+ P + PP SGW SG PA S MH
Sbjct: 684 GQGQQPPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAATYSSM-PMHNPG 742
Query: 1393 YMPPANMLSEYGHAMMHSPNSFHPAGSYPH 1482
YMP M + H MM SP+ H P+
Sbjct: 743 YMPSGTMPPQ--HGMMPSPSGLHQTPPPPY 770
>ref|XP_002322027.1| predicted protein [Populus trichocarpa] gi|222869023|gb|EEF06154.1|
predicted protein [Populus trichocarpa]
Length = 447
Score = 660 bits (1702), Expect = 0.0
Identities = 333/441 (75%), Positives = 368/441 (83%), Gaps = 1/441 (0%)
Frame = +1
Query: 163 MSAVSSQPQFRYTQPPSKVLHLRNLPWECTEDELIELGKPFGKVVNTKCNVGANRNQAFI 342
MS+VSSQ QFR TQPPSKVLHLRNLPWECTE+EL+ELGKPFG VVNTKCNVG NRNQAFI
Sbjct: 1 MSSVSSQSQFRLTQPPSKVLHLRNLPWECTEEELVELGKPFGNVVNTKCNVGPNRNQAFI 60
Query: 343 EFAELNQAIAMISYFASSSEAAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGN 522
EFA+LNQAIAMISY+ASSSE AQVRGKTVYLQYSNRQEIVNNKTTAD GNVLL+TIEG
Sbjct: 61 EFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADAGGNVLLITIEGA 120
Query: 523 DARLVSIEVLHVVFSAFGFVHKITTFEKTAGFQALVQFTDSETASSAKDALDGRSIPSYL 702
DARLVSI+VLH+VFSAFGFVHKITTFEK FQALVQF+D ETASSAK+ALDGR+IPSYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKMDRFQALVQFSDVETASSAKNALDGRNIPSYL 180
Query: 703 IPE-LSPCSLKITYSAHTDLSVKFQSHRSRDYTNPSLPVNPSAIDVTGQMSMGLDGKRLE 879
+PE L PC+L+I YS HTDLSVKFQSHRSRDYTNP+LPV SAID G SMGLDGK+LE
Sbjct: 181 LPEHLGPCTLRIAYSGHTDLSVKFQSHRSRDYTNPNLPVAQSAIDANGMFSMGLDGKKLE 240
Query: 880 PESNVLLASIENMPYELTLDVLHTVFSTFGTVLKIAMFDKNGGIQALVQYPDVQTAVVAK 1059
PESNVLLASIENM Y +TLDVLH VFS+FG V KIAMFDKN G+QAL+QYPDVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLDVLHMVFSSFGPVQKIAMFDKNSGLQALIQYPDVQTAVVAK 300
Query: 1060 QALEGHCIYDGGYCKLHISYSRHTDLSIKVNNDRSRDYTIPIAPMLSTQPSMLGQPPSQP 1239
+ALEGHCIYDGG+CKLH+SYSRH DLSIKVNNDRSRDYTIP M++ QPS+LGQ QP
Sbjct: 301 EALEGHCIYDGGFCKLHLSYSRHNDLSIKVNNDRSRDYTIPNNVMVNPQPSILGQ---QP 357
Query: 1240 PSVLGPGGPQYNGAQFAPVHQGHAMPLPPSGWNSGVPAVPQSMQGQMHTHHYMPPANMLS 1419
+ GP Y GAQFAP + +P P SGW +G P VP SM GQM+ + Y+PP M
Sbjct: 358 VATHGPPSHLYTGAQFAPTTEHSMIPQPSSGWATGFPPVPNSMPGQMNNNPYLPPGTMPP 417
Query: 1420 EYGHAMMHSPNSFHPAGSYPH 1482
+ GH MM P+ G PH
Sbjct: 418 QMGHGMMQMPSH----GGPPH 434
>ref|XP_004168482.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Cucumis sativus]
Length = 457
Score = 655 bits (1690), Expect = 0.0
Identities = 340/454 (74%), Positives = 377/454 (83%), Gaps = 14/454 (3%)
Frame = +1
Query: 163 MSAVSSQPQFRYTQPPSKVLHLRNLPWECTEDELIELGKPFGKVVNTKCNVGANRNQAFI 342
M++VSSQPQFRYTQPPSKVLHLRNLPWECTE+ELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1 MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
Query: 343 EFAELNQAIAMISYFASSSEAAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGN 522
EFA++NQAIAMISY+ASSSE AQVRGKTVYLQYSNRQEIVNNKTTADV GNVLLVTIEG
Sbjct: 61 EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
Query: 523 DARLVSIEVLHVVFSAFGFVHKITTFEKTAGFQALVQFTDSETASSAKDALDGRSIPSYL 702
DARLVSI+VLH+VFSAFGFVHKITTFEKTAGFQALVQF+D+ETASSAK+ALDGRSIP YL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
Query: 703 IPE-LSPCSLKITYSAHTDLSVKFQSHRSRDYTNPSLPVNPSAIDVTGQMSM----GLDG 867
+P+ + PCSL+ITYSAHTDL+VKFQSHRSRDYTNP LPV PSAID +GQ S+ GLDG
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSSLQFTVGLDG 240
Query: 868 KRLEPESNVLLASIENMPYELTLDVLHTVFSTFGTVLKIAMFDKNGGIQALVQYPDVQTA 1047
K+LEPESNVLLASIENM Y +TL+VLH VFS FG V KIAMFDKNGG+QAL+QYPDVQTA
Sbjct: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300
Query: 1048 VVAKQALEGHCIYDGGYCKLHISYSRHTDLSIKVNNDRSRDYTIP-IAPMLSTQPSMLGQ 1224
VVAK+ALEGHCIYDGG+CKLHISYSRHTDLSIKVNNDRSRDYTIP PM+++QP ++GQ
Sbjct: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 360
Query: 1225 PPSQ------PPSVLGPGGPQYNGAQFAPVHQGHAMPLPP--SGWNSGVPAVPQSMQGQM 1380
P Q P ++GP QYNG Q+ P + PP SGW SG PA S M
Sbjct: 361 GPGQGQGQQPPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAATYSSM-PM 419
Query: 1381 HTHHYMPPANMLSEYGHAMMHSPNSFHPAGSYPH 1482
H YMP M + H MM SP+ H P+
Sbjct: 420 HNPGYMPSGTMPPQ--HGMMPSPSGLHQTPPPPY 451