BLASTX nr result

ID: Angelica22_contig00003237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00003237
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141765.1| PREDICTED: 30S ribosomal protein S17, chloro...   139   6e-31
sp|P17092.1|RR17_PEA RecName: Full=30S ribosomal protein S17, ch...   127   3e-27
ref|XP_003597741.1| 30S ribosomal protein S17 [Medicago truncatu...   127   3e-27
emb|CBI36128.3| unnamed protein product [Vitis vinifera]              126   4e-27
ref|XP_002284468.1| PREDICTED: 30S ribosomal protein S17, chloro...   126   4e-27

>ref|XP_004141765.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Cucumis
           sativus] gi|449519627|ref|XP_004166836.1| PREDICTED: 30S
           ribosomal protein S17, chloroplastic-like [Cucumis
           sativus]
          Length = 164

 Score =  139 bits (350), Expect = 6e-31
 Identities = 69/101 (68%), Positives = 79/101 (78%), Gaps = 3/101 (2%)
 Frame = +3

Query: 228 PTIKAMRSLQGRVVCATNDKTVSVEVTRLAPHPXXXXXXXXXXXFQAHDPDNKFQVGDYV 407
           P+I+AMRSLQGRVVCATNDKTV+VEV RLAPHP           +QAHDPDN+FQVGD+V
Sbjct: 57  PSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFQVGDFV 116

Query: 408 QLEKCRPISKTKTFLAVPVPPRNAKK---TGSVPKELGLPL 521
           +LEKCRPISK KTFLA+PVP RN+KK    G    ELG+PL
Sbjct: 117 ELEKCRPISKMKTFLAIPVPARNSKKKAVEGGEGGELGIPL 157


>sp|P17092.1|RR17_PEA RecName: Full=30S ribosomal protein S17, chloroplastic; AltName:
           Full=CS17; Flags: Precursor gi|169068|gb|AAA33658.1|
           ribosomal protein S17, partial [Pisum sativum]
          Length = 134

 Score =  127 bits (318), Expect = 3e-27
 Identities = 64/103 (62%), Positives = 77/103 (74%)
 Frame = +3

Query: 213 RSLPSPTIKAMRSLQGRVVCATNDKTVSVEVTRLAPHPXXXXXXXXXXXFQAHDPDNKFQ 392
           RSLP P IKAM++++G+VVCA+ +KTV+VEVTRLAPHP           +QAHDP+N F+
Sbjct: 28  RSLPFPAIKAMKTMEGKVVCASGNKTVAVEVTRLAPHPKYQKRIRLKKKYQAHDPENDFK 87

Query: 393 VGDYVQLEKCRPISKTKTFLAVPVPPRNAKKTGSVPKELGLPL 521
           VGD VQL K RPISK KTFLAVP P R +KK GS   ELG+PL
Sbjct: 88  VGDIVQLLKTRPISKKKTFLAVPAPSRKSKKAGS-SGELGIPL 129


>ref|XP_003597741.1| 30S ribosomal protein S17 [Medicago truncatula]
           gi|217075408|gb|ACJ86064.1| unknown [Medicago
           truncatula] gi|355486789|gb|AES67992.1| 30S ribosomal
           protein S17 [Medicago truncatula]
           gi|388491878|gb|AFK34005.1| unknown [Medicago
           truncatula]
          Length = 151

 Score =  127 bits (318), Expect = 3e-27
 Identities = 65/104 (62%), Positives = 78/104 (75%)
 Frame = +3

Query: 210 PRSLPSPTIKAMRSLQGRVVCATNDKTVSVEVTRLAPHPXXXXXXXXXXXFQAHDPDNKF 389
           P+SLPS  IKAM++++G+VVCATNDKTVSVEVTRLAPHP           +QAHDP+N F
Sbjct: 38  PQSLPS--IKAMKTMEGKVVCATNDKTVSVEVTRLAPHPKYKKRIRMKKKYQAHDPENVF 95

Query: 390 QVGDYVQLEKCRPISKTKTFLAVPVPPRNAKKTGSVPKELGLPL 521
           +VGD VQL K RPISK KTFLAVPVP RN+ K  +   +L +PL
Sbjct: 96  KVGDVVQLCKIRPISKNKTFLAVPVPARNSGKANNSSGDLDIPL 139


>emb|CBI36128.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score =  126 bits (317), Expect = 4e-27
 Identities = 65/106 (61%), Positives = 77/106 (72%), Gaps = 1/106 (0%)
 Frame = +3

Query: 207 PPRSLPSPTIKAMRSLQGRVVCATNDKTVSVEVTRLAPHPXXXXXXXXXXXFQAHDPDNK 386
           PP     P I+AM+S+QGRVVCAT+DKTV+VEV RLAPHP           +QAHDPDN+
Sbjct: 79  PPPPTFLPPIRAMKSMQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQ 138

Query: 387 FQVGDYVQLEKCRPISKTKTFLAVPVPPRN-AKKTGSVPKELGLPL 521
           F+VGD VQLEK RPISKTKTF+A+PVP RN AK   +   EL +PL
Sbjct: 139 FKVGDVVQLEKSRPISKTKTFVAIPVPNRNRAKSQEAAAGELEIPL 184


>ref|XP_002284468.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Vitis
           vinifera]
          Length = 145

 Score =  126 bits (317), Expect = 4e-27
 Identities = 65/106 (61%), Positives = 77/106 (72%), Gaps = 1/106 (0%)
 Frame = +3

Query: 207 PPRSLPSPTIKAMRSLQGRVVCATNDKTVSVEVTRLAPHPXXXXXXXXXXXFQAHDPDNK 386
           PP     P I+AM+S+QGRVVCAT+DKTV+VEV RLAPHP           +QAHDPDN+
Sbjct: 35  PPPPTFLPPIRAMKSMQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQ 94

Query: 387 FQVGDYVQLEKCRPISKTKTFLAVPVPPRN-AKKTGSVPKELGLPL 521
           F+VGD VQLEK RPISKTKTF+A+PVP RN AK   +   EL +PL
Sbjct: 95  FKVGDVVQLEKSRPISKTKTFVAIPVPNRNRAKSQEAAAGELEIPL 140


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