BLASTX nr result

ID: Angelica22_contig00002950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00002950
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519872.1| conserved hypothetical protein [Ricinus comm...   210   3e-52
ref|XP_002266174.1| PREDICTED: protein PAM68, chloroplastic [Vit...   206   4e-51
ref|NP_974571.1| uncharacterized protein [Arabidopsis thaliana] ...   206   5e-51
ref|XP_002870000.1| hypothetical protein ARALYDRAFT_492947 [Arab...   202   6e-50
ref|XP_004146119.1| PREDICTED: protein PAM68, chloroplastic-like...   197   3e-48

>ref|XP_002519872.1| conserved hypothetical protein [Ricinus communis]
           gi|223540918|gb|EEF42476.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 220

 Score =  210 bits (535), Expect = 3e-52
 Identities = 105/153 (68%), Positives = 116/153 (75%), Gaps = 4/153 (2%)
 Frame = +1

Query: 178 PFLATLNSPKGFGPSPRKTKSPKKDLK----KXXXXXXXXXXXXMRQADVIPEIVTNRMI 345
           P  ATLNSP+GFGPSP+KTK  KK LK                  + A +IPE+VTNRMI
Sbjct: 69  PLYATLNSPRGFGPSPKKTKRTKK-LKTVNPNDDDDDDNNDDDDEQDAGIIPEVVTNRMI 127

Query: 346 KRMGFSVGIPLFIGLMFFPLFYYVKVGLKVDVPSWVPVIVSFVFFGTALLGVSYGIVSSS 525
            RMGFSVG+PLFIGL+FFP FYY+KVGLK+DVP+WVP IVSF FFGTALLGVSYGIVSSS
Sbjct: 128 SRMGFSVGVPLFIGLLFFPFFYYLKVGLKIDVPTWVPYIVSFFFFGTALLGVSYGIVSSS 187

Query: 526 WDPMREGSALGWIEAQKNWPVFLQSLGGSDSRK 624
           WDPMREGS LGW EAQKNWPVF QS  G   +K
Sbjct: 188 WDPMREGSLLGWNEAQKNWPVFWQSFWGRSGKK 220


>ref|XP_002266174.1| PREDICTED: protein PAM68, chloroplastic [Vitis vinifera]
           gi|147866231|emb|CAN79943.1| hypothetical protein
           VITISV_021078 [Vitis vinifera]
          Length = 196

 Score =  206 bits (525), Expect = 4e-51
 Identities = 106/155 (68%), Positives = 117/155 (75%), Gaps = 4/155 (2%)
 Frame = +1

Query: 172 TTPFLATLNSPKGFGPSPRKTKSPKKDLKKXXXXXXXXXXXXMRQAD----VIPEIVTNR 339
           +TP  A+LN PKGFGPSPRKT+  KK LKK               A+    VIPEIVTNR
Sbjct: 43  STPPCASLNRPKGFGPSPRKTEKRKK-LKKNYSDDEDEEEEEEEGAEAEEGVIPEIVTNR 101

Query: 340 MIKRMGFSVGIPLFIGLMFFPLFYYVKVGLKVDVPSWVPVIVSFVFFGTALLGVSYGIVS 519
           MI RMGFSVGIPL IGL+FFP FYY+KVGLK+DVP+WVP IVSF FFG+ALLGVSYGIVS
Sbjct: 102 MISRMGFSVGIPLMIGLLFFPFFYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVSYGIVS 161

Query: 520 SSWDPMREGSALGWIEAQKNWPVFLQSLGGSDSRK 624
           SSWDP+REGS LGW EAQ NWPVF QSL G   +K
Sbjct: 162 SSWDPLREGSFLGWTEAQNNWPVFWQSLWGRSGKK 196


>ref|NP_974571.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75098840|sp|O49668.1|PAM68_ARATH RecName:
           Full=Protein PAM68, chloroplastic; AltName:
           Full=PHOTOSYNTHESIS AFFECTED MUTANT 68; Flags: Precursor
           gi|2828285|emb|CAA16699.1| putative protein [Arabidopsis
           thaliana] gi|7268705|emb|CAB78912.1| putative protein
           [Arabidopsis thaliana] gi|119360097|gb|ABL66777.1|
           At4g19100 [Arabidopsis thaliana]
           gi|332658740|gb|AEE84140.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 214

 Score =  206 bits (524), Expect = 5e-51
 Identities = 103/159 (64%), Positives = 115/159 (72%), Gaps = 7/159 (4%)
 Frame = +1

Query: 169 RTTPFLATLNSPKGFGPSPRKTKSPKK-------DLKKXXXXXXXXXXXXMRQADVIPEI 327
           R  P  AT+NSPKGFGP P+KTK  KK       D                R+  VIPEI
Sbjct: 56  RIAPLHATMNSPKGFGPPPKKTKKSKKPKPGNQSDEDDDDEDEDDDDEEDERERGVIPEI 115

Query: 328 VTNRMIKRMGFSVGIPLFIGLMFFPLFYYVKVGLKVDVPSWVPVIVSFVFFGTALLGVSY 507
           VTNRMI RMGF+VG+PLFIGL+FFP FYY+KVGLKVDVP+WVP IVSFVFFGTAL GVSY
Sbjct: 116 VTNRMISRMGFTVGLPLFIGLLFFPFFYYLKVGLKVDVPTWVPFIVSFVFFGTALAGVSY 175

Query: 508 GIVSSSWDPMREGSALGWIEAQKNWPVFLQSLGGSDSRK 624
           GIVSSSWDP+REGS LGW EA+KNWPVF QS   S  ++
Sbjct: 176 GIVSSSWDPLREGSLLGWNEAKKNWPVFWQSFWNSSDKR 214


>ref|XP_002870000.1| hypothetical protein ARALYDRAFT_492947 [Arabidopsis lyrata subsp.
           lyrata] gi|297315836|gb|EFH46259.1| hypothetical protein
           ARALYDRAFT_492947 [Arabidopsis lyrata subsp. lyrata]
          Length = 214

 Score =  202 bits (515), Expect = 6e-50
 Identities = 100/159 (62%), Positives = 116/159 (72%), Gaps = 7/159 (4%)
 Frame = +1

Query: 169 RTTPFLATLNSPKGFGPSPRKTKSPKK-------DLKKXXXXXXXXXXXXMRQADVIPEI 327
           R +P  AT+NSP+GFGP P+K K  KK       D +              R+  VIPEI
Sbjct: 56  RISPLHATMNSPRGFGPPPKKIKKSKKPKPGNQSDKEDDDEDEDDDDDEDERERGVIPEI 115

Query: 328 VTNRMIKRMGFSVGIPLFIGLMFFPLFYYVKVGLKVDVPSWVPVIVSFVFFGTALLGVSY 507
           VTNRMI RMGF+VG+PLFIGL+FFP FYY+KVGLKVDVP+WVP IVSFVFFGTAL GVSY
Sbjct: 116 VTNRMISRMGFTVGLPLFIGLLFFPFFYYLKVGLKVDVPTWVPFIVSFVFFGTALAGVSY 175

Query: 508 GIVSSSWDPMREGSALGWIEAQKNWPVFLQSLGGSDSRK 624
           GIVSSSWDP+R+GS LGW EA+KNWPVF QS   S  ++
Sbjct: 176 GIVSSSWDPLRKGSLLGWNEAKKNWPVFWQSFRNSSDKR 214


>ref|XP_004146119.1| PREDICTED: protein PAM68, chloroplastic-like [Cucumis sativus]
           gi|449509526|ref|XP_004163614.1| PREDICTED: protein
           PAM68, chloroplastic-like [Cucumis sativus]
          Length = 213

 Score =  197 bits (501), Expect = 3e-48
 Identities = 98/156 (62%), Positives = 115/156 (73%), Gaps = 4/156 (2%)
 Frame = +1

Query: 169 RTTPFLATLNSPKGFGPSPRKTKSPKKDLKKXXXXXXXXXXXXMRQAD----VIPEIVTN 336
           R T   ATL  PKGFGP+ RK K+ K   +               + +    VIPE+VTN
Sbjct: 58  RPTSLNATLRRPKGFGPASRKKKTKKTRREGSEDDDNEEEEEEDEEEEEEGGVIPEVVTN 117

Query: 337 RMIKRMGFSVGIPLFIGLMFFPLFYYVKVGLKVDVPSWVPVIVSFVFFGTALLGVSYGIV 516
           RM+ RMGF+VGIPLFIGL+FFP FYY+KVGLK+DVPSWVPVIVSF FFG+ALLGVSYGIV
Sbjct: 118 RMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGIV 177

Query: 517 SSSWDPMREGSALGWIEAQKNWPVFLQSLGGSDSRK 624
           SSSWDP+REGS LGW EAQKNWPVF +S+ G  ++K
Sbjct: 178 SSSWDPLREGSLLGWNEAQKNWPVFWKSIWGGSNKK 213


Top