BLASTX nr result

ID: Angelica22_contig00002681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00002681
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303373.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
gb|ABA81884.1| nuclear RNA binding protein-like [Solanum tuberosum]   122   3e-26
gb|AAF14242.1|AF110226_1 nuclear RNA binding protein [Nicotiana ...   122   3e-26
ref|XP_002326470.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
gb|ABK94426.1| unknown [Populus trichocarpa]                          119   3e-25

>ref|XP_002303373.1| predicted protein [Populus trichocarpa] gi|222840805|gb|EEE78352.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  123 bits (308), Expect = 2e-26
 Identities = 74/161 (45%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
 Frame = -3

Query: 481 YERHSGTARGNEFSKRDGAGRGNWGTPTDDIAPVTEEPVNDGEKNVDAEKEPEQEDAGDA 302
           YERHSGT RGNE  KR+G+GRGNWGTPTD+IAP TE+PV D EKNV  EK+  +EDA DA
Sbjct: 154 YERHSGTGRGNEI-KREGSGRGNWGTPTDEIAPETEDPVVDNEKNVITEKQQGEEDAADA 212

Query: 301 S-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKVDFDKDFESMQLLSSKK 125
           +                                       ERKV  DKD + MQ LSSKK
Sbjct: 213 NKDTAEKPEEKEPEEKEMTLEEYEKVLEEKRKALLDLKTEERKVGLDKDLQCMQQLSSKK 272

Query: 124 NEEEIFVKLGXXXXXXXXXXXXXXXXXXALSINDFLKPAEG 2
           + +EIF+KLG                  A+SIN+FLKPAEG
Sbjct: 273 SNDEIFIKLGSEKDKRKDAADKEDRAKKAVSINEFLKPAEG 313


>gb|ABA81884.1| nuclear RNA binding protein-like [Solanum tuberosum]
          Length = 363

 Score =  122 bits (306), Expect = 3e-26
 Identities = 73/162 (45%), Positives = 88/162 (54%), Gaps = 2/162 (1%)
 Frame = -3

Query: 481 YERHSGTARGNEFSKRDGAGRGNWGTPTDDIAPVTEEPVNDGEKNVDAEKEPEQEDAGDA 302
           ++R SGT RGNEF KR+G+GRGNWGT  DDIAP TE PV DGEK V+AEK+  QEDAGD 
Sbjct: 159 FDRRSGTGRGNEFIKREGSGRGNWGTTADDIAPETEVPVIDGEKIVEAEKQAGQEDAGDT 218

Query: 301 S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKVDFDKDFESMQLLSSK 128
           +                                        ERKV+ DK+ +SMQLLS+K
Sbjct: 219 NKESTAAEPEEKEPEEKEITLEEYEKVMEEKRKALVALKQEERKVNLDKELQSMQLLSNK 278

Query: 127 KNEEEIFVKLGXXXXXXXXXXXXXXXXXXALSINDFLKPAEG 2
           KN++EIF+KLG                    SIN+FLKPAEG
Sbjct: 279 KNDDEIFIKLGAEKDKKKEAVEKTKKTK---SINEFLKPAEG 317


>gb|AAF14242.1|AF110226_1 nuclear RNA binding protein [Nicotiana tabacum]
          Length = 299

 Score =  122 bits (306), Expect = 3e-26
 Identities = 73/162 (45%), Positives = 88/162 (54%), Gaps = 2/162 (1%)
 Frame = -3

Query: 481 YERHSGTARGNEFSKRDGAGRGNWGTPTDDIAPVTEEPVNDGEKNVDAEKEPEQEDAGDA 302
           ++R SGT RGNE+ KR+G+GRGNWGTP DDIA  TE PVNDGEK V+AEKE  QE+A D 
Sbjct: 94  FDRRSGTGRGNEYIKREGSGRGNWGTPADDIAQETEVPVNDGEKIVEAEKEAGQEEAEDT 153

Query: 301 S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKVDFDKDFESMQLLSSK 128
           +                                        ERKV+ DK+ ESMQLLS+K
Sbjct: 154 NKDSTAAEPEEKEPEEKEMTLEEYEKLMEEKRKALLALKPEERKVNLDKELESMQLLSNK 213

Query: 127 KNEEEIFVKLGXXXXXXXXXXXXXXXXXXALSINDFLKPAEG 2
           KN++EIF+KLG                    SIN+FLKPAEG
Sbjct: 214 KNDDEIFIKLGSEKEKRKEAVEKARKTQ---SINEFLKPAEG 252


>ref|XP_002326470.1| predicted protein [Populus trichocarpa] gi|222833792|gb|EEE72269.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  119 bits (298), Expect = 3e-25
 Identities = 74/169 (43%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
 Frame = -3

Query: 481 YERHSGTARGNEFSKRDGAGRGNWGTPTDDIAPVTEEPVNDGEKNVDAEKEPEQEDAGDA 302
           Y+RHSGT RGNE  KR+G+GRGNWGTP D+IAP TEEPV D EK+V  EK+PE+EDA  A
Sbjct: 164 YDRHSGTGRGNEL-KREGSGRGNWGTPADEIAPETEEPVVDNEKSVITEKQPEEEDAAAA 222

Query: 301 S---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKVDFDKDFES 149
           S                                               ERKV  DKD +S
Sbjct: 223 SKDAADASKDAAVNEPEEKEPEDKEMTLEEYEKVLEEKRKALLSLKAEERKVGLDKDLQS 282

Query: 148 MQLLSSKKNEEEIFVKLGXXXXXXXXXXXXXXXXXXALSINDFLKPAEG 2
           MQ LSSKK+ +EIF+KLG                  A+SIN+FLKPA G
Sbjct: 283 MQQLSSKKSNDEIFIKLGSEKDKRKDAADKEDRAKKAVSINEFLKPAGG 331


>gb|ABK94426.1| unknown [Populus trichocarpa]
          Length = 370

 Score =  119 bits (298), Expect = 3e-25
 Identities = 74/169 (43%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
 Frame = -3

Query: 481 YERHSGTARGNEFSKRDGAGRGNWGTPTDDIAPVTEEPVNDGEKNVDAEKEPEQEDAGDA 302
           Y+RHSGT RGNE  KR+G+GRGNWGTP D+IAP TEEPV D EK+V  EK+PE+EDA  A
Sbjct: 160 YDRHSGTGRGNEL-KREGSGRGNWGTPADEIAPETEEPVVDNEKSVITEKQPEEEDAAAA 218

Query: 301 S---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKVDFDKDFES 149
           S                                               ERKV  DKD +S
Sbjct: 219 SKDAADASKDAAVNEPEEKEPEDKEMTLEEYEKVLEEKRKALLSLKAEERKVGLDKDLQS 278

Query: 148 MQLLSSKKNEEEIFVKLGXXXXXXXXXXXXXXXXXXALSINDFLKPAEG 2
           MQ LSSKK+ +EIF+KLG                  A+SIN+FLKPA G
Sbjct: 279 MQQLSSKKSNDEIFIKLGSEKDKRKDAADKEDRAKKAVSINEFLKPAGG 327


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