BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00002529
         (1242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001190584.1| U5 small nuclear ribonucleoprotein helicase ...    57   2e-16
ref|NP_200922.2| U5 small nuclear ribonucleoprotein helicase [Ar...    57   2e-16
ref|XP_002864717.1| hypothetical protein ARALYDRAFT_919354 [Arab...    57   2e-16
ref|XP_003527109.1| PREDICTED: activating signal cointegrator 1 ...    57   2e-16
ref|XP_003598950.1| Activating signal cointegrator 1 complex sub...    57   2e-15

>ref|NP_001190584.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
           gi|9759460|dbj|BAB10376.1| RNA helicase [Arabidopsis
           thaliana] gi|332010043|gb|AED97426.1| U5 small nuclear
           ribonucleoprotein helicase [Arabidopsis thaliana]
          Length = 2157

 Score = 56.6 bits (135), Expect(2) = 2e-16
 Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 47/113 (41%)
 Frame = -1

Query: 303 LQHRKELVYAVHHGMFVPQ----------------------------------------- 247
           + HRKE+V A+HHG  + +                                         
Sbjct: 353 IMHRKEIVDAIHHGQMILKSDKAASNTQSRMPTYGTQVTVQTESAKQIEKLRRKEEKKNK 412

Query: 246 -----GNDNELSSMSFSSLIQASEKKSIFDNLIGTG-GESNATALPQGTVKKH 106
                G ++E+S  +FSSL++ASEKK+ F++LIG+G   S A ALPQGTV+KH
Sbjct: 413 RNADLGLESEISEANFSSLLEASEKKTAFEDLIGSGEANSLALALPQGTVRKH 465



 Score = 56.6 bits (135), Expect(2) = 2e-16
 Identities = 28/33 (84%), Positives = 28/33 (84%)
 Frame = -2

Query: 101 YEEVTIPPTQTVPMKPGEKLIEIKELYDFAQAA 3
           YEEV IPPT T  MKPGEKLIEIKEL DFAQAA
Sbjct: 469 YEEVFIPPTPTAQMKPGEKLIEIKELDDFAQAA 501


>ref|NP_200922.2| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
           gi|332010042|gb|AED97425.1| U5 small nuclear
           ribonucleoprotein helicase [Arabidopsis thaliana]
          Length = 2146

 Score = 56.6 bits (135), Expect(2) = 2e-16
 Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 47/113 (41%)
 Frame = -1

Query: 303 LQHRKELVYAVHHGMFVPQ----------------------------------------- 247
           + HRKE+V A+HHG  + +                                         
Sbjct: 353 IMHRKEIVDAIHHGQMILKSDKAASNTQSRMPTYGTQVTVQTESAKQIEKLRRKEEKKNK 412

Query: 246 -----GNDNELSSMSFSSLIQASEKKSIFDNLIGTG-GESNATALPQGTVKKH 106
                G ++E+S  +FSSL++ASEKK+ F++LIG+G   S A ALPQGTV+KH
Sbjct: 413 RNADLGLESEISEANFSSLLEASEKKTAFEDLIGSGEANSLALALPQGTVRKH 465



 Score = 56.6 bits (135), Expect(2) = 2e-16
 Identities = 28/33 (84%), Positives = 28/33 (84%)
 Frame = -2

Query: 101 YEEVTIPPTQTVPMKPGEKLIEIKELYDFAQAA 3
           YEEV IPPT T  MKPGEKLIEIKEL DFAQAA
Sbjct: 469 YEEVFIPPTPTAQMKPGEKLIEIKELDDFAQAA 501


>ref|XP_002864717.1| hypothetical protein ARALYDRAFT_919354 [Arabidopsis lyrata subsp.
           lyrata] gi|297310552|gb|EFH40976.1| hypothetical protein
           ARALYDRAFT_919354 [Arabidopsis lyrata subsp. lyrata]
          Length = 2112

 Score = 56.6 bits (135), Expect(2) = 2e-16
 Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 47/113 (41%)
 Frame = -1

Query: 303 LQHRKELVYAVHHGMFVPQ----------------------------------------- 247
           + HRKE+V A+HHG  + +                                         
Sbjct: 319 IMHRKEIVDAIHHGQMILKSDKTASNTQSRMPTYGTQVTVQTESAKQIEKLRRKEEKKNK 378

Query: 246 -----GNDNELSSMSFSSLIQASEKKSIFDNLIGTG-GESNATALPQGTVKKH 106
                G ++E+S  +FSSL++ASEKK+ F++LIG+G   S A ALPQGTV+KH
Sbjct: 379 RNADLGLESEISEANFSSLLEASEKKTAFEDLIGSGEANSLALALPQGTVRKH 431



 Score = 56.6 bits (135), Expect(2) = 2e-16
 Identities = 28/33 (84%), Positives = 28/33 (84%)
 Frame = -2

Query: 101 YEEVTIPPTQTVPMKPGEKLIEIKELYDFAQAA 3
           YEEV IPPT T  MKPGEKLIEIKEL DFAQAA
Sbjct: 435 YEEVFIPPTPTAQMKPGEKLIEIKELDDFAQAA 467


>ref|XP_003527109.1| PREDICTED: activating signal cointegrator 1 complex subunit 3
           [Glycine max]
          Length = 2088

 Score = 57.4 bits (137), Expect(2) = 2e-16
 Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 3/54 (5%)
 Frame = -1

Query: 255 VPQGNDNELSSMSFSSLIQASEKKSIFDNLIGTGGESNA---TALPQGTVKKHY 103
           V    D ELS++ FSSL QASE+K +FD +IG+G +  +   TALP+GTV+KH+
Sbjct: 345 VEHAGDGELSALDFSSLHQASERKKMFDEMIGSGDKFESIAVTALPEGTVRKHF 398



 Score = 55.8 bits (133), Expect(2) = 2e-16
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = -2

Query: 101 YEEVTIPPTQTVPMKPGEKLIEIKELYDFAQAA 3
           YEEV IPP  T P+KPGEKLIEI+EL DFAQAA
Sbjct: 401 YEEVNIPPKPTAPLKPGEKLIEIRELDDFAQAA 433


>ref|XP_003598950.1| Activating signal cointegrator 1 complex subunit [Medicago
           truncatula] gi|355487998|gb|AES69201.1| Activating
           signal cointegrator 1 complex subunit [Medicago
           truncatula]
          Length = 1465

 Score = 56.6 bits (135), Expect(2) = 2e-15
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = -2

Query: 101 YEEVTIPPTQTVPMKPGEKLIEIKELYDFAQAA 3
           YEEV IPP  T PMKPGEKLIEI+EL DFAQAA
Sbjct: 399 YEEVIIPPKPTAPMKPGEKLIEIRELDDFAQAA 431



 Score = 52.8 bits (125), Expect(2) = 2e-15
 Identities = 25/51 (49%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = -1

Query: 255 VPQGNDNELSSMSFSSLIQASEKKSIFDNLIGTGGESNA-TALPQGTVKKH 106
           +    D +LS+M FSSL+QASE+K++ D +IG+G  S A  ALP+GT++K+
Sbjct: 345 IEHAGDGDLSTMDFSSLLQASERKNLVDVMIGSGDRSIAVNALPEGTIRKY 395