BLASTX nr result

ID: Angelica22_contig00002493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00002493
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communi...    73   3e-11
ref|XP_002312940.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_003555854.1| PREDICTED: DDB1- and CUL4-associated factor ...    59   3e-07
ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor ...    58   9e-07
ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor ...    58   9e-07

>ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communis]
           gi|223539508|gb|EEF41096.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 482

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/70 (58%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = -3

Query: 455 LRPKARGWM-SMASPEDLMLQLFSLQRRRTGSEDNEQQSMIHHELLELMYDANSDGSSEI 279
           L+PKARGWM  +ASP+DLMLQLFSLQR RT  E  E+ S    ELLELM   N++  S+ 
Sbjct: 411 LKPKARGWMYRIASPQDLMLQLFSLQRWRTSPERIEESSAAGRELLELMLTFNANSDSDD 470

Query: 278 DGYTSSEDVF 249
            G TSS D F
Sbjct: 471 GGDTSSRDDF 480


>ref|XP_002312940.1| predicted protein [Populus trichocarpa] gi|222849348|gb|EEE86895.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/70 (57%), Positives = 52/70 (74%), Gaps = 3/70 (4%)
 Frame = -3

Query: 455 LRPKARGWM-SMASPEDLMLQLFSLQRRRTGSEDNEQQSMIHHELLELM--YDANSDGSS 285
           ++PKARGWM  +ASPEDLMLQLFSLQR+RT  E   Q S++  ELLEL+  ++ANSD SS
Sbjct: 423 VKPKARGWMYRLASPEDLMLQLFSLQRQRTSPESVVQNSVMDSELLELILSFNANSDVSS 482

Query: 284 EIDGYTSSED 255
           +  G  ++ D
Sbjct: 483 DDGGDAANHD 492


>ref|XP_003555854.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform 2
           [Glycine max]
          Length = 490

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
 Frame = -3

Query: 455 LRPKARGWM-SMASPEDLMLQLFSLQRRRTGSEDNEQQSMIHHELLELM--YDANSDGSS 285
           L+PKA+GWM  +A PEDLM QL SL RRR  +E N + S    +LL+L+  ++ANSD S+
Sbjct: 416 LKPKAKGWMYRIAYPEDLM-QLISLPRRRVRTESNGENSSTDRDLLQLILTFNANSDSSN 474

Query: 284 E--IDGYTSSED 255
           E   DG T+S+D
Sbjct: 475 EDDDDGDTTSQD 486


>ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform 1
           [Glycine max]
          Length = 489

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 5/71 (7%)
 Frame = -3

Query: 452 RPKARGWM-SMASPEDLMLQLFSLQRRRTGSEDNEQQSMIHHELLELM--YDANSDGSSE 282
           +PKA+GWM  +A PEDLM QL SL RRR  +E N + S    +LL+L+  ++ANSD S+E
Sbjct: 416 KPKAKGWMYRIAYPEDLM-QLISLPRRRVRTESNGENSSTDRDLLQLILTFNANSDSSNE 474

Query: 281 --IDGYTSSED 255
              DG T+S+D
Sbjct: 475 DDDDGDTTSQD 485


>ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Glycine max]
          Length = 497

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 5/71 (7%)
 Frame = -3

Query: 452 RPKARGWM-SMASPEDLMLQLFSLQRRRTGSEDNEQQSMIHHELLELM--YDANSDGSSE 282
           +PKA+GWM  +A PEDLM QL SL RRR  +E N + S    +LL+L+  ++ANSD S+E
Sbjct: 424 KPKAKGWMYRIAYPEDLM-QLISLPRRRVRTESNGENSSTDRDLLQLILTFNANSDSSNE 482

Query: 281 --IDGYTSSED 255
              DG T+S+D
Sbjct: 483 DDDDGDTTSQD 493


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