BLASTX nr result

ID: Angelica22_contig00002424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00002424
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O80363.1|RK17_TOBAC RecName: Full=50S ribosomal protein L17, ...   291   1e-76
gb|AFK44729.1| unknown [Lotus japonicus]                              286   5e-75
ref|XP_002275983.1| PREDICTED: 50S ribosomal protein L17, chloro...   276   5e-72
ref|NP_001236786.1| uncharacterized protein LOC100500099 [Glycin...   274   2e-71
gb|ACJ83880.1| unknown [Medicago truncatula] gi|388512937|gb|AFK...   272   7e-71

>sp|O80363.1|RK17_TOBAC RecName: Full=50S ribosomal protein L17, chloroplastic; AltName:
           Full=CL17; Flags: Precursor gi|189096138|pdb|3BBO|P
           Chain P, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|3298443|dbj|BAA31512.1| chloroplast
           ribosomal protein L17 [Nicotiana tabacum]
          Length = 205

 Score =  291 bits (745), Expect = 1e-76
 Identities = 152/206 (73%), Positives = 168/206 (81%), Gaps = 3/206 (1%)
 Frame = +1

Query: 127 ATTPTTWNMSCLKAALPPIYNNHPCSVRLXXXXXXXXXXXXKISFKANPISLRSFHGLAP 306
           A+  TTW+MSCLK+ALP I      S+R             K   K++   L SF GLAP
Sbjct: 2   ASASTTWSMSCLKSALPSIQPISSSSLRFSCGPSPSRLRICKP--KSSSRLLHSFVGLAP 59

Query: 307 LHPLLSL---DSNSFDHCFTIIDNGGRISMMRHGRRVPKLNRPPDQRKALLRGLTTQLLK 477
           LHPLLSL   DS SF+H FT+IDNGGR+  MRHGR+VPKLNRPPDQR+ALLRGLTTQLLK
Sbjct: 60  LHPLLSLSSQDSTSFEHSFTVIDNGGRVFAMRHGRKVPKLNRPPDQRRALLRGLTTQLLK 119

Query: 478 YGRIKTTKARASAMRKHVDKMITMAKDGSLHKRRQALGYIYEKQIVHALFAEVPERYGER 657
           +GRIKTTKARA A+RK+VDKMITMAKDGSLHKRRQALG+IYEKQIVHALFAEVP+RYGER
Sbjct: 120 HGRIKTTKARARAVRKYVDKMITMAKDGSLHKRRQALGFIYEKQIVHALFAEVPDRYGER 179

Query: 658 NGGYTRIIRTLPRRGDNAPMAYIELV 735
           NGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 180 NGGYTRIIRTLPRRGDNAPMAYIELV 205


>gb|AFK44729.1| unknown [Lotus japonicus]
          Length = 216

 Score =  286 bits (732), Expect = 5e-75
 Identities = 154/217 (70%), Positives = 171/217 (78%), Gaps = 5/217 (2%)
 Frame = +1

Query: 100 MASVSSLATATTPTTWNMSCLKAALP-PIYNNHPCSVRLXXXXXXXXXXXXKISFKANPI 276
           MASVS +AT +  T W+MS L++ALP P  +    S+R             +IS      
Sbjct: 1   MASVSVMATGSE-TRWSMSSLRSALPSPSPSPSSSSLRFPQFRRPSSPPSLRISKSKPQA 59

Query: 277 SLRSFHGLAPLHPLL----SLDSNSFDHCFTIIDNGGRISMMRHGRRVPKLNRPPDQRKA 444
            L SF GLAPLH L     S + NSF HCFTIIDNGGR+  MRHGRRVPKLNRPPDQR+A
Sbjct: 60  LLPSFTGLAPLHHLSLSSSSSEFNSFSHCFTIIDNGGRVYAMRHGRRVPKLNRPPDQRRA 119

Query: 445 LLRGLTTQLLKYGRIKTTKARASAMRKHVDKMITMAKDGSLHKRRQALGYIYEKQIVHAL 624
           L+RGLTTQLLKYGRIKTT+ARASA+RK+VDKMIT+AKDGSLHKRRQALG+IYEKQIVHAL
Sbjct: 120 LIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHAL 179

Query: 625 FAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 735
           FAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 180 FAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 216


>ref|XP_002275983.1| PREDICTED: 50S ribosomal protein L17, chloroplastic-like [Vitis
           vinifera]
          Length = 198

 Score =  276 bits (706), Expect = 5e-72
 Identities = 148/201 (73%), Positives = 164/201 (81%), Gaps = 3/201 (1%)
 Frame = +1

Query: 142 TWNMSCLKAALPPIYNNHPCSVRLXXXXXXXXXXXXKISFKANPISLRSFHGLAPLHPLL 321
           TW+M+ L++ALP + +      R+                K  PI L SF GLAPL PLL
Sbjct: 10  TWSMATLRSALPSLPSLLCAPSRITLTRP-----------KPMPI-LPSFTGLAPLSPLL 57

Query: 322 SL---DSNSFDHCFTIIDNGGRISMMRHGRRVPKLNRPPDQRKALLRGLTTQLLKYGRIK 492
           SL   +S SF+H FTIIDNGGRIS MRHGRRVPKLNRPPDQR+ALLRGLTTQLLKYGRIK
Sbjct: 58  SLSSPESTSFEHNFTIIDNGGRISAMRHGRRVPKLNRPPDQRRALLRGLTTQLLKYGRIK 117

Query: 493 TTKARASAMRKHVDKMITMAKDGSLHKRRQALGYIYEKQIVHALFAEVPERYGERNGGYT 672
           TT+ARASAMRK+VDKMIT+AKDGSLHKRRQALG+IYEKQIVHALFAEVP+RYG+RNGGYT
Sbjct: 118 TTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVPDRYGDRNGGYT 177

Query: 673 RIIRTLPRRGDNAPMAYIELV 735
           RIIRTLPRRGDNAPMAYIELV
Sbjct: 178 RIIRTLPRRGDNAPMAYIELV 198


>ref|NP_001236786.1| uncharacterized protein LOC100500099 [Glycine max]
           gi|255629133|gb|ACU14911.1| unknown [Glycine max]
          Length = 217

 Score =  274 bits (701), Expect = 2e-71
 Identities = 149/218 (68%), Positives = 174/218 (79%), Gaps = 6/218 (2%)
 Frame = +1

Query: 100 MASVSSLATATTPTTWNMSCLKAALPPIYNNHPCSVRLXXXXXXXXXXXXKISF-KANPI 276
           MASV+ +AT++  + W+M+ L++ALP        S+R             K+   +  P 
Sbjct: 1   MASVAVMATSSD-SRWSMASLRSALPSHSPPVSSSLRFPVLPSSPSSSSTKLRISRTKPK 59

Query: 277 SL-RSFHGLAPLHPL-LSLDSNSF---DHCFTIIDNGGRISMMRHGRRVPKLNRPPDQRK 441
           SL  SF GLAPL+P+ LS  S+ +   DH FTIIDNGGR++ MRHGRRVPKLNRPPDQR+
Sbjct: 60  SLLTSFTGLAPLNPIFLSAPSSEYTGCDHSFTIIDNGGRVTAMRHGRRVPKLNRPPDQRR 119

Query: 442 ALLRGLTTQLLKYGRIKTTKARASAMRKHVDKMITMAKDGSLHKRRQALGYIYEKQIVHA 621
           AL+RGLTTQLLKYGRIKTT+ARASA+RK+VDKMIT+AKDGSLHKRRQALG+IYEKQIVHA
Sbjct: 120 ALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHA 179

Query: 622 LFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 735
           LFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 180 LFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 217


>gb|ACJ83880.1| unknown [Medicago truncatula] gi|388512937|gb|AFK44530.1| unknown
           [Medicago truncatula]
          Length = 214

 Score =  272 bits (696), Expect = 7e-71
 Identities = 148/219 (67%), Positives = 170/219 (77%), Gaps = 7/219 (3%)
 Frame = +1

Query: 100 MASVSSLATA-----TTPTTWNMSCLKAALPPIYNNHPCSVRLXXXXXXXXXXXXKISFK 264
           MA+V+ +AT      TT + WNMS L+++LPPI      S+R             +IS  
Sbjct: 1   MANVAVMATTNNNHPTTTSRWNMSSLRSSLPPIPPTSASSLRFTRPSPTTL----RISRV 56

Query: 265 ANPISLRSFHGLAPLHPLLSLDS--NSFDHCFTIIDNGGRISMMRHGRRVPKLNRPPDQR 438
            +   L SF GL PL P+ +  S  + FDH FT+IDNGGR+  MRHGR+VPKLNRPPDQR
Sbjct: 57  KSQSLLPSFTGLRPL-PIFAPPSEFSGFDHGFTVIDNGGRVYAMRHGRKVPKLNRPPDQR 115

Query: 439 KALLRGLTTQLLKYGRIKTTKARASAMRKHVDKMITMAKDGSLHKRRQALGYIYEKQIVH 618
           KAL+RGLTTQLLKYGRIKTT+ARASA+RK+VDKMIT+AKDGSLHKRRQALG+IYEKQIVH
Sbjct: 116 KALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVH 175

Query: 619 ALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 735
           ALFAEV ERYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 176 ALFAEVQERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 214


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