BLASTX nr result

ID: Angelica22_contig00002302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00002302
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527784.1| Histone H1, putative [Ricinus communis] gi|2...   120   4e-25
emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera]   119   5e-25
ref|XP_002284720.1| PREDICTED: HMG-Y-related protein A [Vitis vi...   119   6e-25
ref|XP_002311516.1| high mobility group family [Populus trichoca...   114   3e-23
gb|ABK94398.1| unknown [Populus trichocarpa]                          112   6e-23

>ref|XP_002527784.1| Histone H1, putative [Ricinus communis] gi|223532819|gb|EEF34594.1|
           Histone H1, putative [Ricinus communis]
          Length = 199

 Score =  120 bits (300), Expect = 4e-25
 Identities = 59/107 (55%), Positives = 76/107 (71%)
 Frame = -2

Query: 732 TLPQYPELIIAAIEAVDDKNGANKTTISKHIESIYGQLPAAHSTLLSHHLNRMKQSGELL 553
           T+PQYPE+I+AAIE+++DKNG+NK+ ISK +E+ Y  LP AH+TLLSHHLN+MKQSG+L+
Sbjct: 27  TIPQYPEMILAAIESLNDKNGSNKSAISKQMETTYPDLPPAHTTLLSHHLNKMKQSGQLV 86

Query: 552 LSKNNYIKPDPNAXXXXXXXXXXXXXXXXXXXXXSDAVVSPARPRGR 412
           L KNNY+KPDPNA                       AV++P RPRGR
Sbjct: 87  LVKNNYMKPDPNA----PPKRGRGRPPKPKAPLPPGAVIAPPRPRGR 129


>emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera]
          Length = 182

 Score =  119 bits (299), Expect = 5e-25
 Identities = 59/107 (55%), Positives = 78/107 (72%)
 Frame = -2

Query: 732 TLPQYPELIIAAIEAVDDKNGANKTTISKHIESIYGQLPAAHSTLLSHHLNRMKQSGELL 553
           ++PQY E+I+AAIEA++DK+G+NK++ISK+IES YG LPAAHSTLL+HHLN+MKQSG+L+
Sbjct: 15  SIPQYSEMIMAAIEALNDKSGSNKSSISKYIESTYGDLPAAHSTLLAHHLNKMKQSGDLV 74

Query: 552 LSKNNYIKPDPNAXXXXXXXXXXXXXXXXXXXXXSDAVVSPARPRGR 412
           + KNNY+KPDPNA                        V++P RPRGR
Sbjct: 75  MVKNNYMKPDPNA----PPRRGRGRPPKPKVPLPPGTVLAPPRPRGR 117


>ref|XP_002284720.1| PREDICTED: HMG-Y-related protein A [Vitis vinifera]
           gi|297737664|emb|CBI26865.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score =  119 bits (298), Expect = 6e-25
 Identities = 59/107 (55%), Positives = 77/107 (71%)
 Frame = -2

Query: 732 TLPQYPELIIAAIEAVDDKNGANKTTISKHIESIYGQLPAAHSTLLSHHLNRMKQSGELL 553
           ++PQY E+I+AAIEA++DK G+NK++ISK+IES YG LPAAHSTLL+HHLN+MKQSG+L+
Sbjct: 15  SIPQYSEMIMAAIEALNDKGGSNKSSISKYIESTYGDLPAAHSTLLAHHLNKMKQSGDLV 74

Query: 552 LSKNNYIKPDPNAXXXXXXXXXXXXXXXXXXXXXSDAVVSPARPRGR 412
           + KNNY+KPDPNA                        V++P RPRGR
Sbjct: 75  MVKNNYMKPDPNA----PPRRGRGRPPKPKVPLPPGTVLAPPRPRGR 117


>ref|XP_002311516.1| high mobility group family [Populus trichocarpa]
           gi|222851336|gb|EEE88883.1| high mobility group family
           [Populus trichocarpa]
          Length = 207

 Score =  114 bits (284), Expect = 3e-23
 Identities = 59/105 (56%), Positives = 71/105 (67%)
 Frame = -2

Query: 726 PQYPELIIAAIEAVDDKNGANKTTISKHIESIYGQLPAAHSTLLSHHLNRMKQSGELLLS 547
           PQYPE+I+AAIEA+++K G+NKT+ISK IES +  LP AHSTLLSHHLN+MKQSG+L+L 
Sbjct: 37  PQYPEMIMAAIEALNEKEGSNKTSISKQIESTHPDLPPAHSTLLSHHLNKMKQSGQLVLV 96

Query: 546 KNNYIKPDPNAXXXXXXXXXXXXXXXXXXXXXSDAVVSPARPRGR 412
           KNNY+KPDPNA                        V  P RPRGR
Sbjct: 97  KNNYMKPDPNA----PPKRGRGRPPKPKLPTPPGTVSGPPRPRGR 137


>gb|ABK94398.1| unknown [Populus trichocarpa]
          Length = 215

 Score =  112 bits (281), Expect = 6e-23
 Identities = 56/107 (52%), Positives = 73/107 (68%)
 Frame = -2

Query: 732 TLPQYPELIIAAIEAVDDKNGANKTTISKHIESIYGQLPAAHSTLLSHHLNRMKQSGELL 553
           T+PQYPE+I+AA+EA+++K G++KT+ISK IES +  LP AH TLLSHHLN++KQSG+L+
Sbjct: 43  TIPQYPEMIMAAVEALNEKEGSSKTSISKQIESTHPDLPPAHGTLLSHHLNKLKQSGQLV 102

Query: 552 LSKNNYIKPDPNAXXXXXXXXXXXXXXXXXXXXXSDAVVSPARPRGR 412
           L KNNY+KPDPNA                       +V  P RPRGR
Sbjct: 103 LVKNNYMKPDPNA----PPKRGRGRPPKPKLPTPPGSVAGPPRPRGR 145


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