BLASTX nr result

ID: Angelica22_contig00002243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00002243
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide...   186   4e-45
emb|CAA27989.1| unnamed protein product [Solanum tuberosum]           185   1e-44
sp|P06183.1|PSBR_SOLTU RecName: Full=Photosystem II 10 kDa polyp...   185   1e-44
gb|ABW35320.1| chloroplast photosystem II PsbR [Prosopis juliflora]   184   3e-44
ref|XP_002332205.1| predicted protein [Populus trichocarpa] gi|2...   182   8e-44

>ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Vitis
           vinifera] gi|147789486|emb|CAN71762.1| hypothetical
           protein VITISV_021149 [Vitis vinifera]
           gi|296082806|emb|CBI21811.3| unnamed protein product
           [Vitis vinifera]
          Length = 139

 Score =  186 bits (473), Expect = 4e-45
 Identities = 98/140 (70%), Positives = 109/140 (77%), Gaps = 2/140 (1%)
 Frame = +2

Query: 152 MATSVMSSVPVSLKPS-FAVEKTAVRGLPSLARTCT-FKITASKARKIKTDSPYGINGGM 325
           MA SVMSS+  SLKPS F+VE+ AVRGLPSLAR+ + F++ AS  +KIKTD PYGI GGM
Sbjct: 1   MAASVMSSL--SLKPSPFSVERRAVRGLPSLARSSSSFRVEASGGKKIKTDKPYGIGGGM 58

Query: 326 SLKEGKDASGRKGKGKGVYQFTDKYGANVDGYSPIYNPDEWSPSGDRYAAGTTGLLIWAV 505
            L +G DASGRKGKGKGVYQF DKYGANVDGYSPIY+PDEWSP GD Y  GTTGLLIWAV
Sbjct: 59  KLSDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPGGDVYVGGTTGLLIWAV 118

Query: 506 TXXXXXXXXXXXVYSTSALA 565
           T           VY+TSALA
Sbjct: 119 TLAGLLLGGALLVYNTSALA 138


>emb|CAA27989.1| unnamed protein product [Solanum tuberosum]
          Length = 138

 Score =  185 bits (469), Expect = 1e-44
 Identities = 93/139 (66%), Positives = 110/139 (79%), Gaps = 1/139 (0%)
 Frame = +2

Query: 152 MATSVMSSVPVSLKPSFAVEKTAVRGLPSLARTCT-FKITASKARKIKTDSPYGINGGMS 328
           MA++VMSS+  SLKP+F +EKT+V+GLPSLAR+ + FK+ AS  +K+KTD PYGING M+
Sbjct: 1   MASTVMSSL--SLKPTFTLEKTSVKGLPSLARSSSPFKVVASGVKKLKTDKPYGINGSMA 58

Query: 329 LKEGKDASGRKGKGKGVYQFTDKYGANVDGYSPIYNPDEWSPSGDRYAAGTTGLLIWAVT 508
           L++G DASGRK KGKGVYQ+ DKYGANVDGYSPIYN DEWSPSGD Y  GTTGL IWAVT
Sbjct: 59  LRDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVT 118

Query: 509 XXXXXXXXXXXVYSTSALA 565
                      VY+TSALA
Sbjct: 119 LVGILAGGALLVYNTSALA 137


>sp|P06183.1|PSBR_SOLTU RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
           AltName: Full=Light-inducible tissue-specific ST-LS1
           protein; Flags: Precursor gi|21489|emb|CAA28450.1|
           ST-LS1 protein [Solanum tuberosum]
           gi|413968448|gb|AFW90561.1| light inducible
           tissue-specific ST-LS1 [Solanum tuberosum]
           gi|413968538|gb|AFW90606.1| light inducible
           tissue-specific ST-LS1 [Solanum tuberosum]
           gi|418730663|gb|AFX66996.1| photosystem II 10 kDa
           polypeptide [Solanum tuberosum]
          Length = 138

 Score =  185 bits (469), Expect = 1e-44
 Identities = 93/139 (66%), Positives = 110/139 (79%), Gaps = 1/139 (0%)
 Frame = +2

Query: 152 MATSVMSSVPVSLKPSFAVEKTAVRGLPSLARTCT-FKITASKARKIKTDSPYGINGGMS 328
           MA++VMSS+  SLKP+F +EKT+V+GLPSLAR+ + FK+ AS  +K+KTD PYGING M+
Sbjct: 1   MASTVMSSL--SLKPTFTLEKTSVKGLPSLARSSSSFKVVASGVKKLKTDKPYGINGSMA 58

Query: 329 LKEGKDASGRKGKGKGVYQFTDKYGANVDGYSPIYNPDEWSPSGDRYAAGTTGLLIWAVT 508
           L++G DASGRK KGKGVYQ+ DKYGANVDGYSPIYN DEWSPSGD Y  GTTGL IWAVT
Sbjct: 59  LRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVT 118

Query: 509 XXXXXXXXXXXVYSTSALA 565
                      VY+TSALA
Sbjct: 119 LVGILAGGALLVYNTSALA 137


>gb|ABW35320.1| chloroplast photosystem II PsbR [Prosopis juliflora]
          Length = 139

 Score =  184 bits (466), Expect = 3e-44
 Identities = 96/140 (68%), Positives = 110/140 (78%), Gaps = 2/140 (1%)
 Frame = +2

Query: 152 MATSVMSSVPVSLKPS-FAVEKTAVRGLPSLARTCT-FKITASKARKIKTDSPYGINGGM 325
           MA+SVM+SV  SLKP+ F VEK+AVRGLPSL+R+ + FK+ AS  +KIKTD PYGINGGM
Sbjct: 1   MASSVMASV--SLKPAPFTVEKSAVRGLPSLSRSSSSFKVVASGGKKIKTDKPYGINGGM 58

Query: 326 SLKEGKDASGRKGKGKGVYQFTDKYGANVDGYSPIYNPDEWSPSGDRYAAGTTGLLIWAV 505
           +L EG D+SGRKGKGKGVYQF DKYG NVDGYSPIYN ++WSPSGD Y  GTTGL IWAV
Sbjct: 59  NLVEGVDSSGRKGKGKGVYQFVDKYGTNVDGYSPIYNTEDWSPSGDVYVGGTTGLAIWAV 118

Query: 506 TXXXXXXXXXXXVYSTSALA 565
           T           VY+TSALA
Sbjct: 119 TLAGLLAGGALLVYNTSALA 138


>ref|XP_002332205.1| predicted protein [Populus trichocarpa] gi|222875312|gb|EEF12443.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  182 bits (462), Expect = 8e-44
 Identities = 93/140 (66%), Positives = 107/140 (76%), Gaps = 2/140 (1%)
 Frame = +2

Query: 152 MATSVMSSVPVSLKPS-FAVEK-TAVRGLPSLARTCTFKITASKARKIKTDSPYGINGGM 325
           MATS + +  +SLKP+ F V+K ++VRGLP+LAR  +FK+ AS+ RK  TD PYGINGGM
Sbjct: 1   MATSSVMAPSISLKPAPFTVKKPSSVRGLPTLARRSSFKVEASRTRKTNTDQPYGINGGM 60

Query: 326 SLKEGKDASGRKGKGKGVYQFTDKYGANVDGYSPIYNPDEWSPSGDRYAAGTTGLLIWAV 505
            L+EG DASGRKGKGKGVYQF DKYGANVDGYSPIYN ++WSPSGD Y  G TGLLIWAV
Sbjct: 61  DLREGVDASGRKGKGKGVYQFVDKYGANVDGYSPIYNTNDWSPSGDVYVGGKTGLLIWAV 120

Query: 506 TXXXXXXXXXXXVYSTSALA 565
           T           VYSTSALA
Sbjct: 121 TLAGLLAGGALLVYSTSALA 140


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