BLASTX nr result

ID: Angelica22_contig00002159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00002159
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein S...   194   2e-47
ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein S...   192   9e-47
ref|NP_001150683.1| LOC100284316 [Zea mays] gi|194696928|gb|ACF8...   191   2e-46
ref|XP_003573751.1| PREDICTED: small nuclear ribonucleoprotein S...   191   2e-46
gb|ACN32165.1| unknown [Zea mays] gi|413935154|gb|AFW69705.1| hy...   191   2e-46

>ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Vitis vinifera]
           gi|297744494|emb|CBI37756.3| unnamed protein product
           [Vitis vinifera]
          Length = 132

 Score =  194 bits (494), Expect = 2e-47
 Identities = 93/98 (94%), Positives = 98/98 (100%)
 Frame = -1

Query: 772 SLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKVSQLEHV 593
           SLGIPVKLLHEAAGH+VTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKVSQLEHV
Sbjct: 4   SLGIPVKLLHEAAGHVVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKVSQLEHV 63

Query: 592 FIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSIGV 479
           FIRGSKVRFMVIPDMLKNAPMFKRL+AR+KGKGS++GV
Sbjct: 64  FIRGSKVRFMVIPDMLKNAPMFKRLDARVKGKGSALGV 101


>ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
           sativus]
          Length = 132

 Score =  192 bits (488), Expect = 9e-47
 Identities = 92/98 (93%), Positives = 98/98 (100%)
 Frame = -1

Query: 772 SLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKVSQLEHV 593
           SLGIPVKLLHEAAGH+V+VELKSGELYRGSMIECEDNWNCQLENIT+TAKDGKVSQLEHV
Sbjct: 4   SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHV 63

Query: 592 FIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSIGV 479
           FIRGSKVRFMVIPDMLKNAPMFKRL+ARIKGKG+S+GV
Sbjct: 64  FIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGV 101


>ref|NP_001150683.1| LOC100284316 [Zea mays] gi|194696928|gb|ACF82548.1| unknown [Zea
           mays] gi|195619600|gb|ACG31630.1| small nuclear
           ribonucleoprotein Sm D3 [Zea mays]
           gi|195641042|gb|ACG39989.1| small nuclear
           ribonucleoprotein Sm D3 [Zea mays]
           gi|413956400|gb|AFW89049.1| Small nuclear
           ribonucleoprotein Sm D3 [Zea mays]
          Length = 132

 Score =  191 bits (486), Expect = 2e-46
 Identities = 90/98 (91%), Positives = 98/98 (100%)
 Frame = -1

Query: 772 SLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKVSQLEHV 593
           SLGIPVKLLHEAAGH+VTVELK+GE+YRGSM+ECEDNWNCQLENITFTAKDGKVSQLEHV
Sbjct: 4   SLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDGKVSQLEHV 63

Query: 592 FIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSIGV 479
           FIRGS+VRFM+IPDMLKNAPMFKRLEARI+GKGS+IGV
Sbjct: 64  FIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAIGV 101


>ref|XP_003573751.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Brachypodium
           distachyon]
          Length = 134

 Score =  191 bits (485), Expect = 2e-46
 Identities = 90/98 (91%), Positives = 98/98 (100%)
 Frame = -1

Query: 772 SLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKVSQLEHV 593
           SLGIPVKLLHEAAGH+VTVELK+GE+YRGSMIECEDNWNCQ+ENITFTAKDGKVSQLEHV
Sbjct: 4   SLGIPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHV 63

Query: 592 FIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSIGV 479
           FIRGS+VRFM+IPDMLKNAPMFKRLEARI+GKGS+IGV
Sbjct: 64  FIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAIGV 101


>gb|ACN32165.1| unknown [Zea mays] gi|413935154|gb|AFW69705.1| hypothetical protein
           ZEAMMB73_559735 [Zea mays]
          Length = 125

 Score =  191 bits (485), Expect = 2e-46
 Identities = 89/98 (90%), Positives = 98/98 (100%)
 Frame = -1

Query: 772 SLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKVSQLEHV 593
           SLGIPVKLLHEAAGH+VTVELK+GE+YRGSM+ECEDNWNCQLENITFTAKDGKVSQLEHV
Sbjct: 4   SLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDGKVSQLEHV 63

Query: 592 FIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSIGV 479
           FIRGS+VRFM+IPDMLKNAPMFKRLEARI+GKGS++GV
Sbjct: 64  FIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAVGV 101


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