BLASTX nr result

ID: Angelica22_contig00002099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00002099
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]       67   3e-09
gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]            65   1e-08
gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]        65   1e-08
sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding prot...    65   1e-08
ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP...    63   5e-08

>gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
          Length = 372

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 33/46 (71%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +2

Query: 488 QVAPQIQNTSE-NKTIWIGDLQPWMDERYLQSCFAPPGEAIAVKII 622
           Q   QIQN+SE NKTIWIGDLQ WMDE YL SCF+  GE I+VKII
Sbjct: 20  QPPTQIQNSSEDNKTIWIGDLQQWMDENYLHSCFSHAGEVISVKII 65


>gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
          Length = 428

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 32/46 (69%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +2

Query: 488 QVAPQIQNTSE-NKTIWIGDLQPWMDERYLQSCFAPPGEAIAVKII 622
           Q   QIQ++SE NKTIWIGDLQ WMDE YL SCF+  GE I+VKII
Sbjct: 71  QSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKII 116


>gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
          Length = 482

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 32/46 (69%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +2

Query: 488 QVAPQIQNTSE-NKTIWIGDLQPWMDERYLQSCFAPPGEAIAVKII 622
           Q   QIQ++SE NKTIWIGDLQ WMDE YL SCF+  GE I+VKII
Sbjct: 125 QSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKII 170


>sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
           Short=Poly(A)-binding protein RBP47; AltName:
           Full=RNA-binding protein 47; Short=NplRBP47
           gi|9663769|emb|CAC01238.1| RNA Binding Protein 47
           [Nicotiana plumbaginifolia]
          Length = 428

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 32/46 (69%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +2

Query: 488 QVAPQIQNTSE-NKTIWIGDLQPWMDERYLQSCFAPPGEAIAVKII 622
           Q   QIQ++SE NKTIWIGDLQ WMDE YL SCF+  GE I+VKII
Sbjct: 71  QSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKII 116


>ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
           sativus] gi|449496017|ref|XP_004160013.1| PREDICTED:
           polyadenylate-binding protein RBP47C-like [Cucumis
           sativus]
          Length = 429

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +2

Query: 497 PQIQNTSENKTIWIGDLQPWMDERYLQSCFAPPGEAIAVKII 622
           P   +TSENKTIW+GDLQ WMDE YL SCFA  GE  ++K+I
Sbjct: 83  PHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGEISSLKVI 124


Top