BLASTX nr result

ID: Angelica22_contig00001919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00001919
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42492.1| unknown [Lotus japonicus]                              263   4e-68
ref|XP_002284393.1| PREDICTED: 40S ribosomal protein S19-3 [Viti...   263   4e-68
ref|NP_200925.1| 40S ribosomal protein S19-3 [Arabidopsis thalia...   262   5e-68
ref|NP_186857.1| 40S ribosomal protein S19-1 [Arabidopsis thalia...   258   1e-66
ref|XP_002884301.1| 40S ribosomal protein S19 [Arabidopsis lyrat...   258   1e-66

>gb|AFK42492.1| unknown [Lotus japonicus]
          Length = 144

 Score =  263 bits (671), Expect = 4e-68
 Identities = 126/144 (87%), Positives = 134/144 (93%)
 Frame = -3

Query: 680 MEAGRTVKDVSPHEFVKAYAAHLKRSGKMELPHWTDIVKTGTFKELAPYDNDWYYIRAAS 501
           M   RTVKDVSPHEFVKAYAAHLKRSGKMELP WTDIVKT  FKELAPYD DWYYIRAAS
Sbjct: 1   MSTARTVKDVSPHEFVKAYAAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYIRAAS 60

Query: 500 MARKIYLRGGLGVGAFRRIYGGSKRNGSAPPHFCKSSGGIARHILQQLQTMNIVDFDSKG 321
           MARKIYLRGGLGVGAF+RIYGGS+RNGS PPHFCKSSG IARHILQQLQTM+I++ D+KG
Sbjct: 61  MARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQTMHIIELDNKG 120

Query: 320 GRKITSSGQRDLDQVAGRIVIVAP 249
           GRKITSSG+RDLDQVAGRIV+VAP
Sbjct: 121 GRKITSSGRRDLDQVAGRIVVVAP 144


>ref|XP_002284393.1| PREDICTED: 40S ribosomal protein S19-3 [Vitis vinifera]
           gi|147858266|emb|CAN83920.1| hypothetical protein
           VITISV_028810 [Vitis vinifera]
           gi|297733901|emb|CBI15148.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score =  263 bits (671), Expect = 4e-68
 Identities = 125/141 (88%), Positives = 131/141 (92%)
 Frame = -3

Query: 680 MEAGRTVKDVSPHEFVKAYAAHLKRSGKMELPHWTDIVKTGTFKELAPYDNDWYYIRAAS 501
           M   RTVKDVSPHEFV AYAAHLKRSGK+ELPHWTDIVKT TFKELAPYD DWYYIRAAS
Sbjct: 1   MATARTVKDVSPHEFVNAYAAHLKRSGKIELPHWTDIVKTATFKELAPYDPDWYYIRAAS 60

Query: 500 MARKIYLRGGLGVGAFRRIYGGSKRNGSAPPHFCKSSGGIARHILQQLQTMNIVDFDSKG 321
           MARKIYLRGG+GVGAFRRIYGGSKRNGS PPHFCKSSG IARHILQQLQTMNI++ DSKG
Sbjct: 61  MARKIYLRGGIGVGAFRRIYGGSKRNGSRPPHFCKSSGSIARHILQQLQTMNIIELDSKG 120

Query: 320 GRKITSSGQRDLDQVAGRIVI 258
           GR+ITSSGQRDLDQVAGRI +
Sbjct: 121 GRRITSSGQRDLDQVAGRIAV 141


>ref|NP_200925.1| 40S ribosomal protein S19-3 [Arabidopsis thaliana]
           gi|297793669|ref|XP_002864719.1| 40S ribosomal protein
           S19 [Arabidopsis lyrata subsp. lyrata]
           gi|27923837|sp|Q9FNP8.1|RS193_ARATH RecName: Full=40S
           ribosomal protein S19-3 gi|9759463|dbj|BAB10379.1| 40S
           ribosomal protein S19 [Arabidopsis thaliana]
           gi|34365671|gb|AAQ65147.1| At5g61170 [Arabidopsis
           thaliana] gi|51970120|dbj|BAD43752.1| 40S ribosomal
           protein S19 - like [Arabidopsis thaliana]
           gi|297310554|gb|EFH40978.1| 40S ribosomal protein S19
           [Arabidopsis lyrata subsp. lyrata]
           gi|332010047|gb|AED97430.1| 40S ribosomal protein S19-3
           [Arabidopsis thaliana]
          Length = 143

 Score =  262 bits (670), Expect = 5e-68
 Identities = 126/139 (90%), Positives = 131/139 (94%)
 Frame = -3

Query: 680 MEAGRTVKDVSPHEFVKAYAAHLKRSGKMELPHWTDIVKTGTFKELAPYDNDWYYIRAAS 501
           M  G+TVKDVSPHEFVKAYAAHLKRSGK+ELP WTDIVKTG  KELAPYD DWYYIRAAS
Sbjct: 1   MATGKTVKDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAAS 60

Query: 500 MARKIYLRGGLGVGAFRRIYGGSKRNGSAPPHFCKSSGGIARHILQQLQTMNIVDFDSKG 321
           MARK+YLRGGLGVGAFRRIYGGSKRNGS PPHFCKSSGG+ARHILQQLQTMNIVD D+KG
Sbjct: 61  MARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKG 120

Query: 320 GRKITSSGQRDLDQVAGRI 264
           GRKITSSGQRDLDQVAGRI
Sbjct: 121 GRKITSSGQRDLDQVAGRI 139


>ref|NP_186857.1| 40S ribosomal protein S19-1 [Arabidopsis thaliana]
           gi|27923843|sp|Q9SGA6.1|RS191_ARATH RecName: Full=40S
           ribosomal protein S19-1
           gi|6513924|gb|AAF14828.1|AC011664_10 putative 40S
           ribosomal protein S19 [Arabidopsis thaliana]
           gi|13878029|gb|AAK44092.1|AF370277_1 putative 40S
           ribosomal protein S19 [Arabidopsis thaliana]
           gi|17104595|gb|AAL34186.1| putative 40S ribosomal
           protein S19 [Arabidopsis thaliana]
           gi|21593712|gb|AAM65679.1| putative 40S ribosomal
           protein S19 [Arabidopsis thaliana]
           gi|332640239|gb|AEE73760.1| 40S ribosomal protein S19-1
           [Arabidopsis thaliana]
          Length = 143

 Score =  258 bits (659), Expect = 1e-66
 Identities = 122/141 (86%), Positives = 132/141 (93%)
 Frame = -3

Query: 680 MEAGRTVKDVSPHEFVKAYAAHLKRSGKMELPHWTDIVKTGTFKELAPYDNDWYYIRAAS 501
           M  G+TVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKTG  KELAPYD DWYYIRAAS
Sbjct: 1   MATGKTVKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAAS 60

Query: 500 MARKIYLRGGLGVGAFRRIYGGSKRNGSAPPHFCKSSGGIARHILQQLQTMNIVDFDSKG 321
           MARK+YLRGGLGVGAFRRIYGGSKRNGS PPHFCKSSGGIARHILQQL+TMNIV+ D+KG
Sbjct: 61  MARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKG 120

Query: 320 GRKITSSGQRDLDQVAGRIVI 258
           GR+ITSSGQRDLDQVAGRI +
Sbjct: 121 GRRITSSGQRDLDQVAGRIAV 141


>ref|XP_002884301.1| 40S ribosomal protein S19 [Arabidopsis lyrata subsp. lyrata]
           gi|297330141|gb|EFH60560.1| 40S ribosomal protein S19
           [Arabidopsis lyrata subsp. lyrata]
          Length = 142

 Score =  258 bits (659), Expect = 1e-66
 Identities = 122/139 (87%), Positives = 132/139 (94%)
 Frame = -3

Query: 674 AGRTVKDVSPHEFVKAYAAHLKRSGKMELPHWTDIVKTGTFKELAPYDNDWYYIRAASMA 495
           AG+TVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKTG  KELAPYD DWYYIRAASMA
Sbjct: 2   AGKTVKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMA 61

Query: 494 RKIYLRGGLGVGAFRRIYGGSKRNGSAPPHFCKSSGGIARHILQQLQTMNIVDFDSKGGR 315
           RK+YLRGGLGVGAFRRIYGGSKRNGS PPHFCKSSGGIARHILQQL+TMNIV+ D+KGGR
Sbjct: 62  RKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGR 121

Query: 314 KITSSGQRDLDQVAGRIVI 258
           +ITSSGQRDLDQVAGRI +
Sbjct: 122 RITSSGQRDLDQVAGRIAV 140


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