BLASTX nr result

ID: Angelica22_contig00001758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00001758
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139908.1| PREDICTED: 50S ribosomal protein L20-like is...   225   7e-57
ref|XP_002268463.1| PREDICTED: 50S ribosomal protein L20 [Vitis ...   224   1e-56
ref|NP_001151809.1| 50S ribosomal protein L20 [Zea mays] gi|2269...   223   3e-56
ref|XP_002301732.1| predicted protein [Populus trichocarpa] gi|2...   222   6e-56
ref|NP_001044164.1| Os01g0734100 [Oryza sativa Japonica Group] g...   221   1e-55

>ref|XP_004139908.1| PREDICTED: 50S ribosomal protein L20-like isoform 1 [Cucumis
           sativus] gi|449444292|ref|XP_004139909.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 2 [Cucumis sativus]
           gi|449444294|ref|XP_004139910.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 3 [Cucumis sativus]
           gi|449444296|ref|XP_004139911.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 4 [Cucumis sativus]
           gi|449475856|ref|XP_004154571.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 1 [Cucumis sativus]
           gi|449475859|ref|XP_004154572.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 2 [Cucumis sativus]
           gi|449475863|ref|XP_004154573.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 3 [Cucumis sativus]
          Length = 125

 Score =  225 bits (574), Expect = 7e-57
 Identities = 107/125 (85%), Positives = 117/125 (93%)
 Frame = +3

Query: 96  MNKKEVFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGSRL 275
           MNK ++FKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWI+RINAG+RL
Sbjct: 1   MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRL 60

Query: 276 HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRSAFPGNKKAVPTPKKEG 455
           HGVNYGNFMHGLMKEN+QLNRKVLSE+SMHEPYSFKALVD+SR+AFPGNK  V  PKK+ 
Sbjct: 61  HGVNYGNFMHGLMKENVQLNRKVLSEISMHEPYSFKALVDISRNAFPGNKNVVFPPKKDA 120

Query: 456 LQMLV 470
             M+V
Sbjct: 121 ASMIV 125


>ref|XP_002268463.1| PREDICTED: 50S ribosomal protein L20 [Vitis vinifera]
           gi|147832535|emb|CAN74888.1| hypothetical protein
           VITISV_041868 [Vitis vinifera]
           gi|296087520|emb|CBI34109.3| unnamed protein product
           [Vitis vinifera]
          Length = 125

 Score =  224 bits (571), Expect = 1e-56
 Identities = 107/125 (85%), Positives = 119/125 (95%)
 Frame = +3

Query: 96  MNKKEVFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGSRL 275
           MNK ++FKLAKGFRGRAKNCIRIARERVEKALQYSYRDRR KKRDMRSLWIERINAGSRL
Sbjct: 1   MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRTKKRDMRSLWIERINAGSRL 60

Query: 276 HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRSAFPGNKKAVPTPKKEG 455
           HGVNY NF+HGLMKENIQLNRKVLSELSMHEPY+FKALVD+S++AFPGNKKAV  P+KEG
Sbjct: 61  HGVNYNNFIHGLMKENIQLNRKVLSELSMHEPYTFKALVDISQNAFPGNKKAVLPPRKEG 120

Query: 456 LQMLV 470
           + +++
Sbjct: 121 ISVVL 125


>ref|NP_001151809.1| 50S ribosomal protein L20 [Zea mays]
           gi|226958655|ref|NP_001152923.1| LOC100280565 [Zea mays]
           gi|242091177|ref|XP_002441421.1| hypothetical protein
           SORBIDRAFT_09g026330 [Sorghum bicolor]
           gi|195605838|gb|ACG24749.1| 50S ribosomal protein L20
           [Zea mays] gi|195649829|gb|ACG44382.1| 50S ribosomal
           protein L20 [Zea mays] gi|241946706|gb|EES19851.1|
           hypothetical protein SORBIDRAFT_09g026330 [Sorghum
           bicolor] gi|413949894|gb|AFW82543.1| 50S ribosomal
           protein L20 isoform 1 [Zea mays]
           gi|413949895|gb|AFW82544.1| 50S ribosomal protein L20
           isoform 2 [Zea mays]
          Length = 122

 Score =  223 bits (569), Expect = 3e-56
 Identities = 110/125 (88%), Positives = 117/125 (93%)
 Frame = +3

Query: 96  MNKKEVFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGSRL 275
           MNK ++FKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAG+RL
Sbjct: 1   MNKGKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGTRL 60

Query: 276 HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRSAFPGNKKAVPTPKKEG 455
           HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSR+AFPGN+   P P KEG
Sbjct: 61  HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRNAFPGNR---PVPAKEG 117

Query: 456 LQMLV 470
           L  ++
Sbjct: 118 LASIL 122


>ref|XP_002301732.1| predicted protein [Populus trichocarpa] gi|222843458|gb|EEE81005.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score =  222 bits (566), Expect = 6e-56
 Identities = 106/118 (89%), Positives = 113/118 (95%)
 Frame = +3

Query: 96  MNKKEVFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGSRL 275
           MNKKE+FKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWI+RINAG+R 
Sbjct: 1   MNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQ 60

Query: 276 HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRSAFPGNKKAVPTPKK 449
           HGVNYGNFMHGLMKENIQLNRKVLSE+SMHEPYSFKALVD+SR+AFPGNK  V  P+K
Sbjct: 61  HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKALVDISRNAFPGNKNVVHPPRK 118


>ref|NP_001044164.1| Os01g0734100 [Oryza sativa Japonica Group]
           gi|15624022|dbj|BAB68076.1| putative 50S ribosomal
           protein L20 [Oryza sativa Japonica Group]
           gi|20161006|dbj|BAB89939.1| putative 50S ribosomal
           protein L20 [Oryza sativa Japonica Group]
           gi|113533695|dbj|BAF06078.1| Os01g0734100 [Oryza sativa
           Japonica Group] gi|215693931|dbj|BAG89130.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218189012|gb|EEC71439.1| hypothetical protein
           OsI_03640 [Oryza sativa Indica Group]
           gi|222619213|gb|EEE55345.1| hypothetical protein
           OsJ_03363 [Oryza sativa Japonica Group]
          Length = 122

 Score =  221 bits (563), Expect = 1e-55
 Identities = 110/125 (88%), Positives = 116/125 (92%)
 Frame = +3

Query: 96  MNKKEVFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGSRL 275
           MNK ++FKLAKGFRGRAKNCIRIARERVEKALQYSYRDR NKKRDMRSLWIERINAG+RL
Sbjct: 1   MNKGKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRHNKKRDMRSLWIERINAGTRL 60

Query: 276 HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRSAFPGNKKAVPTPKKEG 455
           HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRSAFPGN+   P  KKEG
Sbjct: 61  HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRSAFPGNR---PPVKKEG 117

Query: 456 LQMLV 470
           L  ++
Sbjct: 118 LAAIL 122


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