BLASTX nr result

ID: Angelica22_contig00001740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00001740
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, ...   279   7e-73
ref|NP_001241288.1| uncharacterized protein LOC100794560 [Glycin...   267   2e-69
ref|XP_003536534.1| PREDICTED: LOW QUALITY PROTEIN: ribosome-rec...   264   2e-68
ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloro...   262   9e-68
gb|AFK38022.1| unknown [Medicago truncatula]                          261   2e-67

>sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
           AltName: Full=Nuclear located protein D2; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor
          Length = 227

 Score =  279 bits (713), Expect = 7e-73
 Identities = 150/181 (82%), Positives = 159/181 (87%)
 Frame = +3

Query: 3   IEKNVKERMEKTIENVRANFSSIRTGRSNPAMLDKIEVEYYGASTSLKSIAQISTPDSSS 182
           IEK+VKERMEKTIENV+A+F+SIRT RSNP MLDKI+VEYYG  TSLKSIAQISTPDSSS
Sbjct: 47  IEKSVKERMEKTIENVKASFNSIRTXRSNPDMLDKIKVEYYGTPTSLKSIAQISTPDSSS 106

Query: 183 LLVNPYDKSSLKAIEKAIVNSNLGMTPSNDGDVIRLSIPQLTADRRKELSKMVAKQAEEG 362
           LLVNPYDKSSLK IEKAIVNS+LG+TP+NDGDVIRLSIPQLTADRRKELSK+VAKQAEEG
Sbjct: 107 LLVNPYDKSSLKDIEKAIVNSDLGITPNNDGDVIRLSIPQLTADRRKELSKIVAKQAEEG 166

Query: 363 KVALRNIRRDAIXXXXXXXXXXXXXXXIVKDLSSDLQKVTDEYIKKVDSIFKQKEKELMT 542
           KVALRNIRRDAI                VKDLSSDLQKV DEYIKKVDSIFKQKEKELMT
Sbjct: 167 KVALRNIRRDAIKSYDKLEKEKKLSEDNVKDLSSDLQKVIDEYIKKVDSIFKQKEKELMT 226

Query: 543 V 545
           V
Sbjct: 227 V 227


>ref|NP_001241288.1| uncharacterized protein LOC100794560 [Glycine max]
           gi|255638439|gb|ACU19529.1| unknown [Glycine max]
          Length = 261

 Score =  267 bits (683), Expect = 2e-69
 Identities = 138/181 (76%), Positives = 159/181 (87%)
 Frame = +3

Query: 3   IEKNVKERMEKTIENVRANFSSIRTGRSNPAMLDKIEVEYYGASTSLKSIAQISTPDSSS 182
           IEK+ K RM++TI+NVR NFSSIRTGR+NP+MLDKI+VEYYG+  SLKSIAQISTPD+SS
Sbjct: 81  IEKDAKTRMDRTIDNVRTNFSSIRTGRANPSMLDKIQVEYYGSPVSLKSIAQISTPDASS 140

Query: 183 LLVNPYDKSSLKAIEKAIVNSNLGMTPSNDGDVIRLSIPQLTADRRKELSKMVAKQAEEG 362
           LLV PYDKSSLKAIEKAIV+S+LGMTP+NDG++IRLSIPQLT+DRRKELSK+VAKQAEEG
Sbjct: 141 LLVQPYDKSSLKAIEKAIVSSDLGMTPNNDGELIRLSIPQLTSDRRKELSKIVAKQAEEG 200

Query: 363 KVALRNIRRDAIXXXXXXXXXXXXXXXIVKDLSSDLQKVTDEYIKKVDSIFKQKEKELMT 542
           KVALRNIRRDA+                VKDLSSDLQK+TDEY+KKVD+IFKQKEKEL+T
Sbjct: 201 KVALRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKVDTIFKQKEKELLT 260

Query: 543 V 545
           V
Sbjct: 261 V 261


>ref|XP_003536534.1| PREDICTED: LOW QUALITY PROTEIN: ribosome-recycling factor,
           chloroplastic-like [Glycine max]
          Length = 256

 Score =  264 bits (674), Expect = 2e-68
 Identities = 137/181 (75%), Positives = 156/181 (86%)
 Frame = +3

Query: 3   IEKNVKERMEKTIENVRANFSSIRTGRSNPAMLDKIEVEYYGASTSLKSIAQISTPDSSS 182
           IEK+ K RM++TI+NVR NFSSIRTGR+NPAMLDKIEVEYYG+  SLKSIAQISTPD+SS
Sbjct: 76  IEKDAKSRMDRTIDNVRTNFSSIRTGRANPAMLDKIEVEYYGSPVSLKSIAQISTPDASS 135

Query: 183 LLVNPYDKSSLKAIEKAIVNSNLGMTPSNDGDVIRLSIPQLTADRRKELSKMVAKQAEEG 362
           LLV PYDKSSLKAIEK IV+S+LGMTP+NDG+ I+L IPQLT+DRRKELSK+VAKQAEEG
Sbjct: 136 LLVQPYDKSSLKAIEKTIVSSDLGMTPNNDGESIQLRIPQLTSDRRKELSKIVAKQAEEG 195

Query: 363 KVALRNIRRDAIXXXXXXXXXXXXXXXIVKDLSSDLQKVTDEYIKKVDSIFKQKEKELMT 542
           KVALRNIRRDA+                VKDLSSDLQK+TDEY+KKVD+IFKQKEKEL+T
Sbjct: 196 KVALRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKVDTIFKQKEKELLT 255

Query: 543 V 545
           V
Sbjct: 256 V 256


>ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score =  262 bits (669), Expect = 9e-68
 Identities = 134/181 (74%), Positives = 158/181 (87%)
 Frame = +3

Query: 3   IEKNVKERMEKTIENVRANFSSIRTGRSNPAMLDKIEVEYYGASTSLKSIAQISTPDSSS 182
           IEK+VK RMEKTI+ VR+NF+SIRTGRSNPAMLDKIEVEYYG+  SLKSIAQISTPD+SS
Sbjct: 98  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASS 157

Query: 183 LLVNPYDKSSLKAIEKAIVNSNLGMTPSNDGDVIRLSIPQLTADRRKELSKMVAKQAEEG 362
           LLV PYDKSSLK+IEKAIVNS+LGMTP+NDG+VIRL++PQLT++RRKELSK+VAKQAEEG
Sbjct: 158 LLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 217

Query: 363 KVALRNIRRDAIXXXXXXXXXXXXXXXIVKDLSSDLQKVTDEYIKKVDSIFKQKEKELMT 542
           KVA+RNIRRDA+                VKDLSSDLQK+TD+Y+KK+D ++KQKEKEL+ 
Sbjct: 218 KVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLK 277

Query: 543 V 545
           V
Sbjct: 278 V 278


>gb|AFK38022.1| unknown [Medicago truncatula]
          Length = 262

 Score =  261 bits (666), Expect = 2e-67
 Identities = 132/181 (72%), Positives = 158/181 (87%)
 Frame = +3

Query: 3   IEKNVKERMEKTIENVRANFSSIRTGRSNPAMLDKIEVEYYGASTSLKSIAQISTPDSSS 182
           IE +VK RME+T++NV+ NFSSIRTGR+ P+MLDKIEVEYYG+  SLK+IAQISTPD+SS
Sbjct: 82  IENDVKSRMERTLDNVKTNFSSIRTGRATPSMLDKIEVEYYGSPVSLKTIAQISTPDASS 141

Query: 183 LLVNPYDKSSLKAIEKAIVNSNLGMTPSNDGDVIRLSIPQLTADRRKELSKMVAKQAEEG 362
           LLV+PYDKSSLKAIEKAIVNS++GMTP+NDG+VIRLSIPQLT+DRRKEL+K+V+KQ EEG
Sbjct: 142 LLVSPYDKSSLKAIEKAIVNSDVGMTPNNDGEVIRLSIPQLTSDRRKELTKIVSKQVEEG 201

Query: 363 KVALRNIRRDAIXXXXXXXXXXXXXXXIVKDLSSDLQKVTDEYIKKVDSIFKQKEKELMT 542
           KVALRNIRRDA+                VKDLSSDLQK+TD+YIKKVD+++KQKEKEL+T
Sbjct: 202 KVALRNIRRDALKAYEKLEKDKKLSEDNVKDLSSDLQKLTDDYIKKVDALYKQKEKELLT 261

Query: 543 V 545
           V
Sbjct: 262 V 262


Top