BLASTX nr result

ID: Angelica22_contig00001703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00001703
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40586.3| unnamed protein product [Vitis vinifera]              183   2e-44
ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III s...   182   4e-44
ref|XP_004141147.1| PREDICTED: DNA-directed RNA polymerase III s...   166   2e-39
ref|XP_004158339.1| PREDICTED: DNA-directed RNA polymerase III s...   162   6e-38
ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III s...   160   2e-37

>emb|CBI40586.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  183 bits (465), Expect = 2e-44
 Identities = 78/119 (65%), Positives = 90/119 (75%)
 Frame = -3

Query: 571 RSLRSQCKMEFCPTCGILVQFELPHMDRPGRLYCPACPYVCNIEPKVKIKRKHKLVTKRT 392
           RS     +MEFCPTCG  +Q+ELPHM RP R +CP CPYVC+IE KVKIKRK +LV K  
Sbjct: 57  RSFTRLQQMEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEI 116

Query: 391 DPVIENDDFKNAATTEAKCPQCGFGKAAFQQFQTRSADEPMTTFYWCMNENCRARWRED 215
           +P+   DD KN  TT+A CP C FGKA FQQ QTRSADEPM+TFYWC+NENC  +WRED
Sbjct: 117 EPIFSKDDMKNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWRED 175


>ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Vitis vinifera]
          Length = 111

 Score =  182 bits (462), Expect = 4e-44
 Identities = 76/111 (68%), Positives = 87/111 (78%)
 Frame = -3

Query: 547 MEFCPTCGILVQFELPHMDRPGRLYCPACPYVCNIEPKVKIKRKHKLVTKRTDPVIENDD 368
           MEFCPTCG  +Q+ELPHM RP R +CP CPYVC+IE KVKIKRK +LV K  +P+   DD
Sbjct: 1   MEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIFSKDD 60

Query: 367 FKNAATTEAKCPQCGFGKAAFQQFQTRSADEPMTTFYWCMNENCRARWRED 215
            KN  TT+A CP C FGKA FQQ QTRSADEPM+TFYWC+NENC  +WRED
Sbjct: 61  MKNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWRED 111


>ref|XP_004141147.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Cucumis sativus]
          Length = 111

 Score =  166 bits (421), Expect = 2e-39
 Identities = 74/111 (66%), Positives = 84/111 (75%)
 Frame = -3

Query: 547 MEFCPTCGILVQFELPHMDRPGRLYCPACPYVCNIEPKVKIKRKHKLVTKRTDPVIENDD 368
           MEFCPTCG ++QFELP+M +  R +CP CPYV  +E +VKIKRK  LV K  +P+I +DD
Sbjct: 1   MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 60

Query: 367 FKNAATTEAKCPQCGFGKAAFQQFQTRSADEPMTTFYWCMNENCRARWRED 215
            KNAA TEA CP C FGKAAF Q Q RSADEP TTFY CMNENCR  WRED
Sbjct: 61  MKNAAQTEATCPNCAFGKAAFIQIQLRSADEPATTFYKCMNENCRQNWRED 111


>ref|XP_004158339.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Cucumis sativus]
          Length = 112

 Score =  162 bits (409), Expect = 6e-38
 Identities = 74/112 (66%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
 Frame = -3

Query: 547 MEFCPTCGILVQFELPHMDRPGRLYCPACPYVCNIEPKV-KIKRKHKLVTKRTDPVIEND 371
           MEFCPTCG ++QFELP+M +  R +CP CPYV  +E +V KIKRK  LV K  +P+I +D
Sbjct: 1   MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVCKIKRKQHLVKKELEPIISDD 60

Query: 370 DFKNAATTEAKCPQCGFGKAAFQQFQTRSADEPMTTFYWCMNENCRARWRED 215
           D KNAA TEA CP C FGKAAF Q Q RSADEP TTFY CMNENCR  WRED
Sbjct: 61  DMKNAAQTEATCPNCAFGKAAFIQIQLRSADEPATTFYKCMNENCRQNWRED 112


>ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Glycine max]
          Length = 111

 Score =  160 bits (404), Expect = 2e-37
 Identities = 67/110 (60%), Positives = 86/110 (78%)
 Frame = -3

Query: 547 MEFCPTCGILVQFELPHMDRPGRLYCPACPYVCNIEPKVKIKRKHKLVTKRTDPVIENDD 368
           MEFCP+CG ++Q+ELP+M RP R +C ACPYVC+IE +V+IKRK +LV K  +P+   DD
Sbjct: 1   MEFCPSCGNMLQYELPYMGRPSRFFCSACPYVCHIENRVEIKRKQRLVRKEIEPIFSEDD 60

Query: 367 FKNAATTEAKCPQCGFGKAAFQQFQTRSADEPMTTFYWCMNENCRARWRE 218
             NA +TEA CP CG GKAAF++FQTRSADEP T FY C+N +C+ +WRE
Sbjct: 61  MTNAPSTEATCPFCGHGKAAFKEFQTRSADEPATLFYKCLNNDCKKQWRE 110


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