BLASTX nr result

ID: Angelica22_contig00001597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00001597
         (1297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308775.1| predicted protein [Populus trichocarpa] gi|2...   218   2e-54
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   216   8e-54
ref|XP_002322538.1| predicted protein [Populus trichocarpa] gi|2...   209   1e-51
ref|XP_003546179.1| PREDICTED: transcription initiation factor I...   207   5e-51
ref|XP_002262798.2| PREDICTED: transcription initiation factor I...   206   1e-50

>ref|XP_002308775.1| predicted protein [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
            predicted protein [Populus trichocarpa]
          Length = 541

 Score =  218 bits (556), Expect = 2e-54
 Identities = 132/258 (51%), Positives = 149/258 (57%), Gaps = 3/258 (1%)
 Frame = +1

Query: 214  WEHEEIFTDDDERVENDPEEREDLGPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXLKKL 393
            WEHEEIFTDDDE V  DPEEREDL PE+PAPPEIKQ                    LKKL
Sbjct: 289  WEHEEIFTDDDEAVAIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKL 348

Query: 394  LGRTNGLNESXXXXXXXXXXXXXXXXISASPVLAPKQKDA-PKEEPVDNSPLKPISSAPX 570
            LG+ NGLNES                   SPVLAPKQKDA PKEEP DNSP KP      
Sbjct: 349  LGKANGLNESDAEDDDDDDDMDD----DISPVLAPKQKDAVPKEEPADNSPAKPTPPGSA 404

Query: 571  XXXXXXXXXXXXXXXVSSDDAKAATVVPSKKAKTENDVKPVKEEPVXXXXXXXXXXXXXX 750
                           +++DDAK +   P KK KTEN+VKP  +E                
Sbjct: 405  KGTPSTSKSAKGKRKLNADDAKTSNGAPVKKVKTENEVKPTVKEESSPATKGTATPKIMP 464

Query: 751  VPTESG--SAVAGPVTEDEIRAVLTQEKPVTTQDLVAKFKSRLRCKEDKDAFALILRRIS 924
              +++G  S   GPVTE+EIRAVL Q  PVTTQDLVA+FKSRLR  EDK AFA ILRRIS
Sbjct: 465  SSSKTGPTSGPTGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRIS 524

Query: 925  KIQKTTNGKSFVVLREMK 978
            KIQK T+G +FVVLR+ +
Sbjct: 525  KIQK-TSGSNFVVLRDKR 541


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|223541454|gb|EEF43004.1|
            tfiif-alpha, putative [Ricinus communis]
          Length = 533

 Score =  216 bits (551), Expect = 8e-54
 Identities = 131/254 (51%), Positives = 149/254 (58%), Gaps = 1/254 (0%)
 Frame = +1

Query: 214  WEHEEIFTDDDERVENDPEEREDLGPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXLKKL 393
            WEHEEIFTDDDE V ND EEREDL PE+PAPPEIKQ                    LKKL
Sbjct: 287  WEHEEIFTDDDEAVGNDREEREDLAPEVPAPPEIKQDEDDEDEENEEGGLSKSGKELKKL 346

Query: 394  LGRTNGLNESXXXXXXXXXXXXXXXXISASPVLAPKQKDAPKEEPVDNSPLKPISSAPXX 573
            LGR  GLN+S                +S SPVLAPKQ   PKEEP DNSP KP++SA   
Sbjct: 347  LGRAGGLNDSDAEDDDDDDDMDED--VSISPVLAPKQ--TPKEEPADNSPAKPMTSASSK 402

Query: 574  XXXXXXXXXXXXXXVSSDDAKAATVVPSKKAKTENDVKP-VKEEPVXXXXXXXXXXXXXX 750
                          ++SD+AK   V P KK KTEN++KP VKEE                
Sbjct: 403  GTPSTSKSAKGKRKLNSDEAKQTNVAPQKKVKTENELKPTVKEESAPTSKSSATPKA--- 459

Query: 751  VPTESGSAVAGPVTEDEIRAVLTQEKPVTTQDLVAKFKSRLRCKEDKDAFALILRRISKI 930
             P  + +    PVTE+EIRAVL Q  PVTTQDLVA+FKSRL+  EDK AFA ILRRISKI
Sbjct: 460  APPSAKTGSTSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKI 519

Query: 931  QKTTNGKSFVVLRE 972
            QK T+G S+VVLR+
Sbjct: 520  QK-TSGSSYVVLRD 532


>ref|XP_002322538.1| predicted protein [Populus trichocarpa] gi|222867168|gb|EEF04299.1|
            predicted protein [Populus trichocarpa]
          Length = 540

 Score =  209 bits (532), Expect = 1e-51
 Identities = 128/256 (50%), Positives = 146/256 (57%), Gaps = 3/256 (1%)
 Frame = +1

Query: 214  WEHEEIFTDDDERVENDPEEREDLGPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXLKKL 393
            WEHEEIFTDDDE V  DPEEREDL PE+PAPPEIKQ                    LKKL
Sbjct: 289  WEHEEIFTDDDEAVAIDPEEREDLAPEVPAPPEIKQDEDDEDEENEEGGLSKSGKELKKL 348

Query: 394  LGRTNGLNESXXXXXXXXXXXXXXXXISASPVLAPKQKDA-PKEEPVDNSPLKPISSAPX 570
            LG+ NGLNES                   SPVLAPKQKD  PKEE  D SP KP  S   
Sbjct: 349  LGKANGLNESDVEDDDDDEDMDD----DISPVLAPKQKDVVPKEEAADISPAKPTPSGSA 404

Query: 571  XXXXXXXXXXXXXXXVSSDDAKAATVVPSKKAKTENDVKPVKEEPVXXXXXXXXXXXXXX 750
                           ++ +DAK++   P KK KTEN+VKP  +E                
Sbjct: 405  KGTPSTSKSAKGKRKLNGEDAKSSNGAPVKKVKTENEVKPAVKEESSPATKGTATPKVTP 464

Query: 751  VPTESGSAVA--GPVTEDEIRAVLTQEKPVTTQDLVAKFKSRLRCKEDKDAFALILRRIS 924
              +++GS     GPVTE+EIRAVL Q  PVTTQDLVA+FKSRLR  EDK AFA ILRRIS
Sbjct: 465  PSSKTGSTSGSTGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRIS 524

Query: 925  KIQKTTNGKSFVVLRE 972
            KIQK T+G ++VVLR+
Sbjct: 525  KIQK-TSGSNYVVLRD 539


>ref|XP_003546179.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Glycine max]
          Length = 539

 Score =  207 bits (527), Expect = 5e-51
 Identities = 123/257 (47%), Positives = 151/257 (58%), Gaps = 4/257 (1%)
 Frame = +1

Query: 214  WEHEEIFTDDDERVENDPEEREDLGPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXX-LKK 390
            WEHEEIFTDDDE V NDPEEREDL PE+PAPPEIKQ                     LKK
Sbjct: 285  WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGGGLSKSGKELKK 344

Query: 391  LLGRTNGLNESXXXXXXXXXXXXXXXXISASPVLAPKQKDAPKEEPVDNSPLKPISSAPX 570
            LLG+ +GLNES                +   P +A KQKDA KEEPVDNSP KP ++ P 
Sbjct: 345  LLGKASGLNESDAEDDDDDDDDVEDD-VGVPPAIATKQKDALKEEPVDNSPSKPTATGPA 403

Query: 571  XXXXXXXXXXXXXXXVSSDDAKAATVVPSKKAKTENDVK-PVKEEPVXXXXXXXXXXXXX 747
                             +++AK +   P KK K EN+ K   K+                
Sbjct: 404  RGTPSSKSSKGKRKL--NEEAKPSNTAPPKKVKVENEPKVSTKDGNGSASKNSAPPKGTP 461

Query: 748  XVPTESGSAV--AGPVTEDEIRAVLTQEKPVTTQDLVAKFKSRLRCKEDKDAFALILRRI 921
             + +++GS+   +GPV+E+EIRAVL Q+ PVTTQDLVAKFK+RLRC EDK AFA IL+RI
Sbjct: 462  PLSSKAGSSTTTSGPVSEEEIRAVLRQKTPVTTQDLVAKFKARLRCSEDKQAFAEILKRI 521

Query: 922  SKIQKTTNGKSFVVLRE 972
            SKIQKTT+G S+V+LR+
Sbjct: 522  SKIQKTTSGASYVILRD 538


>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Vitis vinifera]
          Length = 534

 Score =  206 bits (523), Expect = 1e-50
 Identities = 129/256 (50%), Positives = 149/256 (58%), Gaps = 3/256 (1%)
 Frame = +1

Query: 214  WEHEEIFTDDDERVENDPEEREDLGPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXX-LKK 390
            WEHEEIFTDDDE V NDPEEREDL PE+PAPPEIKQ                     LKK
Sbjct: 283  WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKK 342

Query: 391  LLGRTNGLNESXXXXXXXXXXXXXXXXISASPVLAPKQKDAPKEEPVDNSPLKPISSAPX 570
            LLG+  G+N+S                I  SPVLAPKQKD PKEEP DNSP+K  ++A  
Sbjct: 343  LLGKAAGMNDSDAEDDDDDEEEDE---IGLSPVLAPKQKDVPKEEPADNSPMKS-ATASA 398

Query: 571  XXXXXXXXXXXXXXXVSSDDAKAATVVPSKKAKTENDVKP-VKEEPVXXXXXXXXXXXXX 747
                            + DD K     P KK KTEN+ K   K+E               
Sbjct: 399  RSTPPTSKSSKGKRKSNGDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVTATPKGTP 458

Query: 748  XVPTESGS-AVAGPVTEDEIRAVLTQEKPVTTQDLVAKFKSRLRCKEDKDAFALILRRIS 924
                ++GS + AGPVTEDEIRAVL Q+ PVTTQDLVAKFK+RL+ +EDK AFA ILRRIS
Sbjct: 459  SSSVKTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRIS 518

Query: 925  KIQKTTNGKSFVVLRE 972
            KIQK TNG ++VVLR+
Sbjct: 519  KIQK-TNGPNYVVLRD 533


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