BLASTX nr result

ID: Angelica22_contig00001363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00001363
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, ...   135   1e-47
emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera]   135   3e-46
ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloro...   134   5e-46
gb|ABR17726.1| unknown [Picea sitchensis]                             127   5e-45
ref|XP_002870663.1| hypothetical protein ARALYDRAFT_493880 [Arab...   135   3e-44

>sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, chloroplastic; AltName:
           Full=CL27; Flags: Precursor gi|170306|gb|AAA34104.1|
           ribosomal protein L27 [Nicotiana tabacum]
           gi|170326|gb|AAA34115.1| ribosomal protein L27
           [Nicotiana tabacum]
          Length = 179

 Score =  135 bits (340), Expect(2) = 1e-47
 Identities = 63/69 (91%), Positives = 66/69 (95%)
 Frame = +3

Query: 198 KIYGDQVAKPGSIIIRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 377
           KI+GDQVAKPGSII+RQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRK+ISVYP
Sbjct: 74  KIFGDQVAKPGSIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKKISVYP 133

Query: 378 RVAVPENPN 404
           R   PENPN
Sbjct: 134 REVQPENPN 142



 Score = 79.7 bits (195), Expect(2) = 1e-47
 Identities = 36/48 (75%), Positives = 43/48 (89%)
 Frame = +1

Query: 1   VAQKLTISFPMNPPMTIEAAHKKGAGSTKNGRDSAGRRLGVKIYGDQV 144
           VA K ++SFP+  P+TIE+AHKKGAGSTKNGRDS G+RLGVKI+GDQV
Sbjct: 33  VAPKFSVSFPLKSPLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQV 80


>emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera]
          Length = 186

 Score =  135 bits (340), Expect(2) = 3e-46
 Identities = 63/69 (91%), Positives = 66/69 (95%)
 Frame = +3

Query: 198 KIYGDQVAKPGSIIIRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 377
           KIYGDQVAKPG+II+RQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRK+ISVYP
Sbjct: 73  KIYGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKKISVYP 132

Query: 378 RVAVPENPN 404
            V  PENPN
Sbjct: 133 XVLQPENPN 141



 Score = 75.1 bits (183), Expect(2) = 3e-46
 Identities = 36/48 (75%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
 Frame = +1

Query: 4   AQKLTISFPMNP-PMTIEAAHKKGAGSTKNGRDSAGRRLGVKIYGDQV 144
           + KL +SFP+   P+TIE+AHKKGAGSTKNGRDS G+RLGVKIYGDQV
Sbjct: 32  SSKLCVSFPLKSLPLTIESAHKKGAGSTKNGRDSRGQRLGVKIYGDQV 79


>ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloroplastic [Vitis
           vinifera] gi|296082339|emb|CBI21344.3| unnamed protein
           product [Vitis vinifera]
          Length = 186

 Score =  134 bits (338), Expect(2) = 5e-46
 Identities = 63/69 (91%), Positives = 66/69 (95%)
 Frame = +3

Query: 198 KIYGDQVAKPGSIIIRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 377
           KIYGDQVAKPG+II+RQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRK+ISVYP
Sbjct: 73  KIYGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKKISVYP 132

Query: 378 RVAVPENPN 404
            V  PENPN
Sbjct: 133 CVLQPENPN 141



 Score = 75.1 bits (183), Expect(2) = 5e-46
 Identities = 36/48 (75%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
 Frame = +1

Query: 4   AQKLTISFPMNP-PMTIEAAHKKGAGSTKNGRDSAGRRLGVKIYGDQV 144
           + KL +SFP+   P+TIE+AHKKGAGSTKNGRDS G+RLGVKIYGDQV
Sbjct: 32  SSKLCVSFPLKSLPLTIESAHKKGAGSTKNGRDSRGQRLGVKIYGDQV 79


>gb|ABR17726.1| unknown [Picea sitchensis]
          Length = 194

 Score =  127 bits (318), Expect(2) = 5e-45
 Identities = 58/69 (84%), Positives = 65/69 (94%)
 Frame = +3

Query: 198 KIYGDQVAKPGSIIIRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 377
           KIYGDQVAKPGSII+RQRGTKFH GKNVGLG+D+TIFSLIDGLVKFEK+GPD+K++SVYP
Sbjct: 80  KIYGDQVAKPGSIIVRQRGTKFHAGKNVGLGRDYTIFSLIDGLVKFEKYGPDKKKVSVYP 139

Query: 378 RVAVPENPN 404
            V  PENPN
Sbjct: 140 YVPQPENPN 148



 Score = 79.3 bits (194), Expect(2) = 5e-45
 Identities = 36/48 (75%), Positives = 42/48 (87%)
 Frame = +1

Query: 1   VAQKLTISFPMNPPMTIEAAHKKGAGSTKNGRDSAGRRLGVKIYGDQV 144
           V Q+ T+SFP+  P+ IEAAHKKG+GSTKNGRDS G+RLGVKIYGDQV
Sbjct: 39  VGQRSTVSFPLKVPLIIEAAHKKGSGSTKNGRDSIGKRLGVKIYGDQV 86


>ref|XP_002870663.1| hypothetical protein ARALYDRAFT_493880 [Arabidopsis lyrata subsp.
           lyrata] gi|297316499|gb|EFH46922.1| hypothetical protein
           ARALYDRAFT_493880 [Arabidopsis lyrata subsp. lyrata]
          Length = 198

 Score =  135 bits (340), Expect(2) = 3e-44
 Identities = 63/69 (91%), Positives = 66/69 (95%)
 Frame = +3

Query: 198 KIYGDQVAKPGSIIIRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 377
           KIYGDQVAKPG+II+RQRGTKFH GKNVG+GKDHTIFSLIDGLVKFEKFGPDRKQISVYP
Sbjct: 81  KIYGDQVAKPGAIIVRQRGTKFHAGKNVGIGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 140

Query: 378 RVAVPENPN 404
           R  VPENPN
Sbjct: 141 REIVPENPN 149



 Score = 68.2 bits (165), Expect(2) = 3e-44
 Identities = 31/35 (88%), Positives = 34/35 (97%)
 Frame = +1

Query: 40  PMTIEAAHKKGAGSTKNGRDSAGRRLGVKIYGDQV 144
           P+TIE+AHKKGAGSTKNGRDS G+RLGVKIYGDQV
Sbjct: 53  PLTIESAHKKGAGSTKNGRDSPGQRLGVKIYGDQV 87


Top