BLASTX nr result

ID: Angelica22_contig00001073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00001073
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    59   4e-07

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/100 (29%), Positives = 57/100 (57%)
 Frame = -3

Query: 300 MGPPTTAQRINLIEEKMPNLEMVVKEMVSTAVETVVNVMRHSLTEVLMEGQGVAAKQLGV 121
           M PPTT QR++L+E +M NL+  +   +S +V   +   + ++ + + +    A K+   
Sbjct: 1   MAPPTTNQRLDLLEAQMANLQNSIAAQISDSVGLAMEAAKITIADQISQRMEEAMKKSKE 60

Query: 120 EFEAMAGQLEGRLNRSRDYHESLINSMRSEQLKFQAKMKS 1
           + +    +LEGR+ R+R+  E ++   R++Q KFQ ++ S
Sbjct: 61  DLDVANFRLEGRIERTRENLEGMLTVARADQNKFQTEVSS 100


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