BLASTX nr result

ID: Angelica22_contig00000920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00000920
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA48410.1| light harvesting chlorophyll a /b binding protei...   221   5e-56
gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]      220   1e-55
pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting ...   220   1e-55
gb|AFK40061.1| unknown [Medicago truncatula]                          220   1e-55
pdb|2BHW|A Chain A, Pea Light-Harvesting Complex Ii At 2.5 Angst...   220   1e-55

>emb|CAA48410.1| light harvesting chlorophyll a /b binding protein [Hedera helix]
          Length = 193

 Score =  221 bits (563), Expect = 5e-56
 Identities = 107/109 (98%), Positives = 109/109 (100%)
 Frame = -1

Query: 328 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLA 149
           GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGE+VDPLYPGGSFDPLGLA
Sbjct: 69  GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 128

Query: 148 EDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 2
           EDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP
Sbjct: 129 EDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 177


>gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]
          Length = 266

 Score =  220 bits (560), Expect = 1e-55
 Identities = 106/109 (97%), Positives = 109/109 (100%)
 Frame = -1

Query: 328 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLA 149
           GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGE+VDPLYPGGSFDPLGLA
Sbjct: 142 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 201

Query: 148 EDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 2
           +DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP
Sbjct: 202 DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 250


>pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting Chlorophyll AB
           Protein Complex From Pea Thylakoid Membranes
          Length = 232

 Score =  220 bits (560), Expect = 1e-55
 Identities = 106/109 (97%), Positives = 109/109 (100%)
 Frame = -1

Query: 328 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLA 149
           GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGE+VDPLYPGGSFDPLGLA
Sbjct: 108 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 167

Query: 148 EDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 2
           +DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP
Sbjct: 168 DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 216


>gb|AFK40061.1| unknown [Medicago truncatula]
          Length = 266

 Score =  220 bits (560), Expect = 1e-55
 Identities = 106/109 (97%), Positives = 109/109 (100%)
 Frame = -1

Query: 328 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLA 149
           GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGE+VDPLYPGGSFDPLGLA
Sbjct: 142 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 201

Query: 148 EDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 2
           +DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP
Sbjct: 202 DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 250


>pdb|2BHW|A Chain A, Pea Light-Harvesting Complex Ii At 2.5 Angstrom Resolution
           gi|109157230|pdb|2BHW|B Chain B, Pea Light-Harvesting
           Complex Ii At 2.5 Angstrom Resolution
           gi|109157231|pdb|2BHW|C Chain C, Pea Light-Harvesting
           Complex Ii At 2.5 Angstrom Resolution
          Length = 232

 Score =  220 bits (560), Expect = 1e-55
 Identities = 106/109 (97%), Positives = 109/109 (100%)
 Frame = -1

Query: 328 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLA 149
           GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGE+VDPLYPGGSFDPLGLA
Sbjct: 108 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 167

Query: 148 EDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 2
           +DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP
Sbjct: 168 DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 216


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