BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00000875
         (4940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...  1717   0.0  
emb|CBI29879.3| unnamed protein product [Vitis vinifera]             1714   0.0  
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...  1655   0.0  
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1590   0.0  
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...  1588   0.0  

>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score = 1717 bits (4447), Expect = 0.0
 Identities = 915/1648 (55%), Positives = 1144/1648 (69%), Gaps = 62/1648 (3%)
 Frame = -1

Query: 4934 DSNKICKTCGQRSNDCPGHCGHIELVNLVYNPILFDKLYNIIGHTCFYCLRFRMDEEVVK 4755
            D N  C++CGQRS  CPGHCGHI+LV+ VYNP+LF+ L+N++  TCF+C  F+    +V+
Sbjct: 108  DENTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQ 167

Query: 4754 LCISQLKMIAKGDIIGARRLDEGYILDTSTSPEDGETSDFQ-----------------DD 4626
              +SQL++I+KGD++GA+ LD       S+ PED + S                      
Sbjct: 168  KYVSQLELISKGDVVGAKNLDS-ISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQ 226

Query: 4625 QSWSSLQFTEASSVLXXXXXXXXXXXXXXXXKNPKISKPAFGWFHMSGLSAVDTRANIIR 4446
            Q W+SLQ  EA SV+                K+P+++KP FGWFHM+GLS   TRAN+IR
Sbjct: 227  QEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIR 286

Query: 4445 AVG-ELSIEKVSHSEYTQEAE-----------IDMAESDSCMTTSVETKDSRTKRHVQK- 4305
                E  + +V+  + + E E           +D  E+ S +  +   +D+ TKR  +K 
Sbjct: 287  GSKLERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKRLERKG 346

Query: 4304 VKGASHSSKQNDTFSRTLLPSEVHDIIKALWANESGILSYICGVQHESLKITNGQTLSHS 4125
             +      KQ   FS  LLPSEV DI++ LW NE+ + S+I  +  E L   +G    +S
Sbjct: 347  AQAPIEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLG-ASGNKAGYS 405

Query: 4124 MFFIEALLVPPAKFRPPAITVDTVSEHTQTAHLSKVXXXXXXXXXXXXNRSEQSNIVRRW 3945
            MFF+E +LVPP KFRPP+    +V EH QT  L KV            N SE+S I+ RW
Sbjct: 406  MFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRW 465

Query: 3944 LELQQSINLMFDSKTALN---RNAMPGICQLLEKKEGIFRQKMMGKRVNHSCRSVISPDP 3774
            ++LQQSIN++FD KTA     R+   GICQLLEKKEG+FRQKMMGKRVN +CRSVISPDP
Sbjct: 466  MDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDP 525

Query: 3773 YLAVNEIGIPPYFALRLTYPVRVTPWNAHKLREAIINGSEIHPGATNFADEVSNCKLPLG 3594
            YLAVNEIGIPPYFALRLTYP +VTPWN  KLR+AIING EIHPGAT++ D++S  KL + 
Sbjct: 526  YLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVN 585

Query: 3593 KKARVSISRKLPSSRGEAS----AKSLEMEGKIVYCHMKDGDVVLVNRQPTLHKPSIMAH 3426
            KK R+SISRKLPSSRG  +    +   E EGKIVY H++DGD+VLVNRQPTLHKPSIMAH
Sbjct: 586  KKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAH 645

Query: 3425 IVRVLPGEKTIRMHYANCSTYNADFDGDEMNVHLPQDEVSRAEAYNIVNANNQYIVPTRG 3246
            +VRVL GEKT+RMHYANCSTYNADFDGDEMNVH PQDE+SRAEAYNIVNANNQYIVP+RG
Sbjct: 646  VVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRG 705

Query: 3245 DTVRGLIQDHIGAAVLLTMKDTFLTRDQYDQLLYSSGVFTAGPXXXXXXXXXXXXKVESF 3066
            D +RGLIQDHI +AVLLT KDTFLTR+QY+QLLYSSG+ +                    
Sbjct: 706  DPIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSGSGSFIGKPGKKVSVLDSED 765

Query: 3065 GLQPVLPAVWKPKPLWTGKQVITSLLNHLTRGCKPFTLENEGKIPYQYFSRDSSNNRPSK 2886
             +QP+LPA+WKP+PLW+GKQVIT++LNH+TRG KPFT E +GKIP +YF  +    +  K
Sbjct: 766  EMQPLLPAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKSGK 825

Query: 2885 DEEAGA-------------ENKLLIRRNELVRGVIDKAQFGKYGLVHTVQELYGSDTAGV 2745
             ++ G+             E KLLI +NELVRGVIDKAQF KYGLVH VQELYGS+TAG+
Sbjct: 826  GKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGI 885

Query: 2744 LLSALSRLFTCFLQMHGFTCGVDDLILLPHYDIQRKXXXXXXXXXXXV-HCDFVNFKRGK 2568
            LLS LSRLFT FLQMHGFTCGVDDL++ P+YDI RK           + HC F+    GK
Sbjct: 886  LLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGK 945

Query: 2567 IGPKELQYEIEKVMRNNGESAVARLDGKMKNELREKGSKINKELLLNGLYKPFPKNCISL 2388
            I P +LQ E+EK++ +NGE+A+ RLD  MKNEL E  SK+NK+LLL GL KPFPKNC+SL
Sbjct: 946  IDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSL 1005

Query: 2387 MTISGAKGSSVNFQQISSSLGQQELEGKRVPRMTSGKTLPSFSPWDFSSRAGGYITDRFL 2208
            MT +GAKGS+VNF QISS LGQQ+LEGKRVPRM SGKTLP F PWD ++RAGG+I+DRFL
Sbjct: 1006 MTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFL 1065

Query: 2207 TGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLECLKVCYDYTVRDADGSIVQ 2028
            TGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLECLKVCYDYTVRD+DGSIVQ
Sbjct: 1066 TGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQ 1125

Query: 2027 FFYGEDGVDVHQTSFLNKFDALAKNREIIGQKIHHKLEYNAYIKKLPNKLKERVDELTNI 1848
            F YG+DGVDVHQTSF+ +F+ALA N E++ +K     ++N YI+KLP +L+++  +    
Sbjct: 1126 FNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQDGKFNGYIQKLPKELRKKTKKFIEG 1185

Query: 1847 SLKGQSSSDEL-KERDLLMLMKQKYLSSLAQPGEPVGVIAAQSVGEPSTQMTLNTFHLAG 1671
             ++ +   D + K++D + L+KQKY+SSLAQPGEPVGV+AAQSVGEPSTQMTLNTFHLAG
Sbjct: 1186 FMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAG 1245

Query: 1670 RGEMNVTLGIPRLQEILMTATSVIKTPIVTCRLLEGKSXXXXXXXXXXXXXXXXXDIIES 1491
            RGE+NVTLGIPRLQEILMTA + IKTPI+TC L  G+S                 DI ES
Sbjct: 1246 RGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITES 1305

Query: 1490 VEICVVPLYIYKDQICRLYKIKIKIKK------HELVSKEDIQETLEIMFLRELEDAIEN 1329
            +E+ +VP  +   Q C +YK+K+K+ +      H  +S ED +ETLE +F+RELEDAI+N
Sbjct: 1306 MEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQN 1365

Query: 1328 HVNLLSRISGIKDFTENIETMSASETGDAVSGNKL---QXXXXXXXXXXXXXXXXXXDAQ 1158
            H+ LLS+ISGIK+F  +  +M++ ET +  SG+ L                      DAQ
Sbjct: 1366 HLLLLSKISGIKNFLPDSRSMASKETDEDASGDGLAGGNGDEDDDGEDDGGAEDLGLDAQ 1425

Query: 1157 KRKRQASDEIDYEDGIDGKSNEGELTE-LESEIDQTDDQADDEIESSIGHVEDVDVEDEP 981
            KRK+QASDE+DY D  +G+ +EGE +  L  EID  +D+ +      I + E+V + D  
Sbjct: 1426 KRKQQASDEMDYGDS-EGEPDEGEPSAGLTEEIDLVEDEVE------ISNNEEVGISDPK 1478

Query: 980  SNNSLEKGLITESTSTDXXXXXXXXXXXRGPLVRKDSDRSCFVKTKGQHYEVHFRFINEP 801
              +S  K      +S +           R   ++KD DR+  VK KG ++EVHFRF NEP
Sbjct: 1479 DEDS--KVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEP 1536

Query: 800  HILLSQIVQKVAKKVPLRGSGKIEHCQQLSYDVLEKQVLWXXXXXXXXXXXXKVQKDLSN 621
            HILL+QI QK A KV +R SGKI+ CQ +  D  + QV++              +K    
Sbjct: 1537 HILLAQIAQKAANKVYIRSSGKIDLCQVI--DCNKDQVIYYGRDPKKRENIPGEEK--KK 1592

Query: 620  LSALKAAGVDITALWEMQDVLDVNHIYSNNIHLMLKTYGVEVARKTIIKEVQDVFKIYGV 441
            L AL+ AGVD TA W+MQD LDV ++YSNN+H ML T+GVE AR TIIKEV +VF  YGV
Sbjct: 1593 LPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGV 1652

Query: 440  EIDYRHLSLIADYMTHSGEYRPMSRHGMISESLSPLMKMSFETPSKFIVEAASHGLTDNL 261
            +++ RHLSLIAD+MTHSG YRPM+RHG I+ES+SP  KM+FET SKFIVEAASHG+TDNL
Sbjct: 1653 KVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNL 1712

Query: 260  ETPSARICLGLPVKLGTGSFDLMQNLQI 177
            E+ SARICLGLPVK+GTG FDLMQ ++I
Sbjct: 1713 ESASARICLGLPVKMGTGCFDLMQKIEI 1740


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 1714 bits (4440), Expect = 0.0
 Identities = 913/1636 (55%), Positives = 1138/1636 (69%), Gaps = 50/1636 (3%)
 Frame = -1

Query: 4934 DSNKICKTCGQRSNDCPGHCGHIELVNLVYNPILFDKLYNIIGHTCFYCLRFRMDEEVVK 4755
            D N  C++CGQRS  CPGHCGHI+LV+ VYNP+LF+ L+N++  TCF+C  F+    +V+
Sbjct: 59   DENTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQ 118

Query: 4754 LCISQLKMIAKGDIIGARRLDEGYILDTSTSPEDGETSDFQ-----------------DD 4626
              +SQL++I+KGD++GA+ LD       S+ PED + S                      
Sbjct: 119  KYVSQLELISKGDVVGAKNLDS-ISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQ 177

Query: 4625 QSWSSLQFTEASSVLXXXXXXXXXXXXXXXXKNPKISKPAFGWFHMSGLSAVDTRANIIR 4446
            Q W+SLQ  EA SV+                K+P+++KP FGWFHM+GLS   TRAN+IR
Sbjct: 178  QEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIR 237

Query: 4445 AVGELSIEKVSHSEYTQEAEIDMAESDSCMTTSVETKDSRTKRHVQK-VKGASHSSKQND 4269
                  +E+  +   T E    +A +D         +D+ TKR  +K  +      KQ  
Sbjct: 238  GS---KLERPLNGVDTDETHSSIAPTDGI-------QDTVTKRLERKGAQAPIEFIKQKS 287

Query: 4268 TFSRTLLPSEVHDIIKALWANESGILSYICGVQHESLKITNGQTLSHSMFFIEALLVPPA 4089
             FS  LLPSEV DI++ LW NE+ + S+I  +  E L   +G    +SMFF+E +LVPP 
Sbjct: 288  FFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLG-ASGNKAGYSMFFLETILVPPI 346

Query: 4088 KFRPPAITVDTVSEHTQTAHLSKVXXXXXXXXXXXXNRSEQSNIVRRWLELQQSINLMFD 3909
            KFRPP+    +V EH QT  L KV            N SE+S I+ RW++LQQSIN++FD
Sbjct: 347  KFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFD 406

Query: 3908 SKTALN---RNAMPGICQLLEKKEGIFRQKMMGKRVNHSCRSVISPDPYLAVNEIGIPPY 3738
             KTA     R+   GICQLLEKKEG+FRQKMMGKRVN +CRSVISPDPYLAVNEIGIPPY
Sbjct: 407  GKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPY 466

Query: 3737 FALRLTYPVRVTPWNAHKLREAIINGSEIHPGATNFADEVSNCKLPLGKKARVSISRKLP 3558
            FALRLTYP +VTPWN  KLR+AIING EIHPGAT++ D++S  KL + KK R+SISRKLP
Sbjct: 467  FALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLP 526

Query: 3557 SSRGEAS----AKSLEMEGKIVYCHMKDGDVVLVNRQPTLHKPSIMAHIVRVLPGEKTIR 3390
            SSRG  +    +   E EGKIVY H++DGD+VLVNRQPTLHKPSIMAH+VRVL GEKT+R
Sbjct: 527  SSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLR 586

Query: 3389 MHYANCSTYNADFDGDEMNVHLPQDEVSRAEAYNIVNANNQYIVPTRGDTVRGLIQDHIG 3210
            MHYANCSTYNADFDGDEMNVH PQDE+SRAEAYNIVNANNQYIVP+RGD +RGLIQDHI 
Sbjct: 587  MHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIV 646

Query: 3209 AAVLLTMKDTFLTRDQYDQLLYSSGVFTAGPXXXXXXXXXXXXKVESFGLQPVLPAVWKP 3030
            +AVLLT KDTFLTR+QY+QLLYSSG+ +                     +QP+LPA+WKP
Sbjct: 647  SAVLLTKKDTFLTREQYNQLLYSSGLSSGSGSFIGKPGKKVSVLDSEDEMQPLLPAIWKP 706

Query: 3029 KPLWTGKQVITSLLNHLTRGCKPFTLENEGKIPYQYFSRDSSNNRPSKDEEAGA------ 2868
            +PLW+GKQVIT++LNH+TRG KPFT E +GKIP +YF  +    +  K ++ G+      
Sbjct: 707  EPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEK 766

Query: 2867 -------ENKLLIRRNELVRGVIDKAQFGKYGLVHTVQELYGSDTAGVLLSALSRLFTCF 2709
                   E KLLI +NELVRGVIDKAQF KYGLVH VQELYGS+TAG+LLS LSRLFT F
Sbjct: 767  RIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVF 826

Query: 2708 LQMHGFTCGVDDLILLPHYDIQRKXXXXXXXXXXXV-HCDFVNFKRGKIGPKELQYEIEK 2532
            LQMHGFTCGVDDL++ P+YDI RK           + HC F+    GKI P +LQ E+EK
Sbjct: 827  LQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEK 886

Query: 2531 VMRNNGESAVARLDGKMKNELREKGSKINKELLLNGLYKPFPKNCISLMTISGAKGSSVN 2352
            ++ +NGE+A+ RLD  MKNEL E  SK+NK+LLL GL KPFPKNC+SLMT +GAKGS+VN
Sbjct: 887  IILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVN 946

Query: 2351 FQQISSSLGQQELEGKRVPRMTSGKTLPSFSPWDFSSRAGGYITDRFLTGLRPQEYYFHC 2172
            F QISS LGQQ+LEGKRVPRM SGKTLP F PWD ++RAGG+I+DRFLTGL PQEYYFHC
Sbjct: 947  FSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHC 1006

Query: 2171 MAGREGLVDTAVKTSRSGYLQRCLVKNLECLKVCYDYTVRDADGSIVQFFYGEDGVDVHQ 1992
            MAGREGLVDTAVKTSRSGYLQRCL+KNLECLKVCYDYTVRD+DGSIVQF YG+DGVDVHQ
Sbjct: 1007 MAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQ 1066

Query: 1991 TSFLNKFDALAKNREIIGQKIHHKLEYNAYIKKLPNKLKERVDELTNISLKGQSSSDEL- 1815
            TSF+ +F+ALA N E++ +K     ++N YI+KLP +L+++  +     ++ +   D + 
Sbjct: 1067 TSFITEFEALAVNEEVVCEKFGQDGKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDNMK 1126

Query: 1814 KERDLLMLMKQKYLSSLAQPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1635
            K++D + L+KQKY+SSLAQPGEPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPR
Sbjct: 1127 KQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPR 1186

Query: 1634 LQEILMTATSVIKTPIVTCRLLEGKSXXXXXXXXXXXXXXXXXDIIESVEICVVPLYIYK 1455
            LQEILMTA + IKTPI+TC L  G+S                 DI ES+E+ +VP  +  
Sbjct: 1187 LQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQD 1246

Query: 1454 DQICRLYKIKIKIKK------HELVSKEDIQETLEIMFLRELEDAIENHVNLLSRISGIK 1293
             Q C +YK+K+K+ +      H  +S ED +ETLE +F+RELEDAI+NH+ LLS+ISGIK
Sbjct: 1247 HQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIK 1306

Query: 1292 DFTENIETMSASETGDAVSGNKL---QXXXXXXXXXXXXXXXXXXDAQKRKRQASDEIDY 1122
            +F  +  +M++ ET +  SG+ L                      DAQKRK+QASDE+DY
Sbjct: 1307 NFLPDSRSMASKETDEDASGDGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDY 1366

Query: 1121 EDGIDGKSNEGELTE-LESEIDQTDDQADDEIESSIGHVEDVDVEDEPSNNSLEKGLITE 945
             D  +G+ +EGE +  L  EID  +D+ +      I + E+V + D    +S  K     
Sbjct: 1367 GDS-EGEPDEGEPSAGLTEEIDLVEDEVE------ISNNEEVGISDPKDEDS--KVPSKS 1417

Query: 944  STSTDXXXXXXXXXXXRGPLVRKDSDRSCFVKTKGQHYEVHFRFINEPHILLSQIVQKVA 765
             +S +           R   ++KD DR+  VK KG ++EVHFRF NEPHILL+QI QK A
Sbjct: 1418 KSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAA 1477

Query: 764  KKVPLRGSGKIEHCQQLSYDVLEKQVLWXXXXXXXXXXXXKVQKDLSNLSALKAAGVDIT 585
             KV +R SGKI+ CQ +  D  + QV++              +K    L AL+ AGVD T
Sbjct: 1478 NKVYIRSSGKIDLCQVI--DCNKDQVIYYGRDPKKRENIPGEEK--KKLPALQTAGVDFT 1533

Query: 584  ALWEMQDVLDVNHIYSNNIHLMLKTYGVEVARKTIIKEVQDVFKIYGVEIDYRHLSLIAD 405
            A W+MQD LDV ++YSNN+H ML T+GVE AR TIIKEV +VF  YGV+++ RHLSLIAD
Sbjct: 1534 AFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIAD 1593

Query: 404  YMTHSGEYRPMSRHGMISESLSPLMKMSFETPSKFIVEAASHGLTDNLETPSARICLGLP 225
            +MTHSG YRPM+RHG I+ES+SP  KM+FET SKFIVEAASHG+TDNLE+ SARICLGLP
Sbjct: 1594 FMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLP 1653

Query: 224  VKLGTGSFDLMQNLQI 177
            VK+GTG FDLMQ ++I
Sbjct: 1654 VKMGTGCFDLMQKIEI 1669


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score = 1655 bits (4285), Expect = 0.0
 Identities = 913/1650 (55%), Positives = 1121/1650 (67%), Gaps = 62/1650 (3%)
 Frame = -1

Query: 4940 PYDSNKICKTCGQRSNDCPGHCGHIELVNLVYNPILFDKLYNIIGHTCFYCLRFRMDEEV 4761
            P     ICKTCGQRS +CPGHCGHI+LV+ VYNP+LF+ L+ ++  TCF C  FRM    
Sbjct: 60   PLSERTICKTCGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQ 119

Query: 4760 VKLCISQLKMIAKGDIIGARRLDEGYILDTSTSPEDGETS----------------DFQD 4629
            V+ CI QL++I KGDI+GA+RL E      +  PE+ + S                +   
Sbjct: 120  VEKCIKQLELIVKGDIVGAKRL-ESVSPSEALYPEESDLSHESCPTIHSGVQCNDGEHTR 178

Query: 4628 DQSWSSLQFTEASSVLXXXXXXXXXXXXXXXXKNPKISKPAFGWFHMSGLSAVDTRANII 4449
             Q W+SLQFTEA SVL                 NP I+KP FGWFH SG+S    RAN+I
Sbjct: 179  QQGWTSLQFTEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVI 238

Query: 4448 RAVGELSIEKVSHSEYTQEAEIDMAESDSCMTTSVETKDSRTKRHVQKV-KGASHSSKQN 4272
                +L     S  E T + E D AE           + S TK+H +K  K     ++Q 
Sbjct: 239  TG-HQLGGLLGSEIEGTTDVE-DAAEPGD--------QHSGTKKHKKKERKEVLEFTRQK 288

Query: 4271 DTFSRTLLPSEVHDIIKALWANESGILSYICGVQHESLKITNGQTLSHSMFFIEALLVPP 4092
             TFS+ LLPSEV + ++ LW NE+ I S+I  +Q +       +    +MFF+E +LVPP
Sbjct: 289  STFSKQLLPSEVKEKLELLWKNEARICSFISDLQQQEF---GKRKAGPAMFFLETILVPP 345

Query: 4091 AKFRPPAITVDTVSEHTQTAHLSKVXXXXXXXXXXXXNRSEQSNIVRRWLELQQSINLMF 3912
             KFRPP    D+V EH QT  LSKV            N+ E S IVRRWL+LQQSIN +F
Sbjct: 346  IKFRPPTKGGDSVMEHPQTVLLSKVLQSNISLGDAHINK-EHSKIVRRWLDLQQSINTLF 404

Query: 3911 DSKTALN---RNAMPGICQLLEKKEGIFRQKMMGKRVNHSCRSVISPDPYLAVNEIGIPP 3741
            DSKTA     R   PGICQLLEKKEG+FRQKMMGKRVN++CRSVISPDPY+ VNEIGIPP
Sbjct: 405  DSKTAKGPGQREGAPGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYIGVNEIGIPP 464

Query: 3740 YFALRLTYPVRVTPWNAHKLREAIINGSEIHPGATNFADEVSNCKLPLGKKARVSISRKL 3561
             FA++LTYP RVTPWN  KLR A+INGSE HPGAT++ D++S  KLP  +KAR+SISRKL
Sbjct: 465  CFAVKLTYPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPARKARISISRKL 524

Query: 3560 PSSRGEAS----AKSLEMEGKIVYCHMKDGDVVLVNRQPTLHKPSIMAHIVRVLPGEKTI 3393
            PSSRG  +        E EGKIVY H++DGDVVLVNRQPTLHKPSIMAH+VRVL GEKT+
Sbjct: 525  PSSRGAVTQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTL 584

Query: 3392 RMHYANCS-TYNADFDGDEMNVHLPQDEVSRAEAYNIVNANNQYIVPTRGDTVRGLIQDH 3216
            RMHYANCS TYNADFDGDEMNVH PQDEVSRAEAYNIVNANNQ++ P+ G+ +RGLIQDH
Sbjct: 585  RMHYANCSITYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGEPLRGLIQDH 644

Query: 3215 IGAAVLLTMKDTFLTRDQYDQLLYSSGVFTAGPXXXXXXXXXXXXKVESFG-LQPVLPAV 3039
            I +AVLLT KDTFL++D+++QLLYSSGV T GP               S   +Q + PA+
Sbjct: 645  IVSAVLLTKKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQKVLWSRSEDEIQTLPPAI 704

Query: 3038 WKPKPLWTGKQVITSLLNHLTRGCKPFTLENEGKIPYQYFSRDSSNNRPSKDEEAGA--- 2868
            WKPKPLWTGKQVIT++LNH+T    PFT+E + KIP  +F   ++ ++P ++E++     
Sbjct: 705  WKPKPLWTGKQVITAILNHITSDHPPFTVEKDAKIPSNFFKSRANEDKPCQEEKSDKDAP 764

Query: 2867 ------ENKLLIRRNELVRGVIDKAQFGKYGLVHTVQELYGSDTAGVLLSALSRLFTCFL 2706
                  E K+L+ +NELVRGVIDK QFG+YGLVHTV EL GS TAG+LLS LSRLFT +L
Sbjct: 765  AEKEPDEEKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLSVLSRLFTAYL 824

Query: 2705 QMHGFTCGVDDLILLPHYDIQRKXXXXXXXXXXXV-HCDFVNFK--RGKIGPKELQYEIE 2535
            QMHGFTCGVDDL++L + D +RK             H +F+  K  + KI P  +Q  IE
Sbjct: 825  QMHGFTCGVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIKIDPVAMQLNIE 884

Query: 2534 KVMRNNGESAVARLDGKMKNELREKGSK-INKELLLNGLYKPFPKNCISLMTISGAKGSS 2358
            K +R++G+SA+A LD +M NEL  K S  +   LL +GL KP  KNCISLMT SGAKGS 
Sbjct: 885  KTIRSDGDSALAYLDRQMSNELNTKTSSGVISNLLSDGLLKPSGKNCISLMTTSGAKGSK 944

Query: 2357 VNFQQISSSLGQQELEGKRVPRMTSGKTLPSFSPWDFSSRAGGYITDRFLTGLRPQEYYF 2178
            VNFQQISS LGQQELEGKRVPRM SGKTLP F PWD+++R+GGYITDRFLTGLRPQEYYF
Sbjct: 945  VNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARSGGYITDRFLTGLRPQEYYF 1004

Query: 2177 HCMAGREGLVDTAVKTSRSGYLQRCLVKNLECLKVCYDYTVRDADGSIVQFFYGEDGVDV 1998
            HCMAGREGLVDTAVKTSRSGYLQRCL+KNLECLK+ YD+TVRDADGS+VQF+YGEDGVDV
Sbjct: 1005 HCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKIGYDHTVRDADGSVVQFYYGEDGVDV 1064

Query: 1997 HQTSFLNKFDALAKNREIIGQKIHHKL-EYNAYIKKLPNKLKERVDE-LTNISLKGQSSS 1824
            HQTSF+ KF  LA N+++I ++   +L  +N+YI +LP  LKE+ D  L + S+ G+ +S
Sbjct: 1065 HQTSFIAKFKELALNQDMIYKRSGGQLGAFNSYISELPEALKEKADRFLDDFSIMGRIAS 1124

Query: 1823 DELKERDLLMLMKQKYLSSLAQPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLG 1644
            + +K  DL  LMKQK+L SLAQPGEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLG
Sbjct: 1125 NLVKREDLYNLMKQKFLLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLG 1184

Query: 1643 IPRLQEILMTATSVIKTPIVTCRLLEGKSXXXXXXXXXXXXXXXXXDIIESVEICVVPLY 1464
            IPRLQEILMTA+  IKTPI+TC L EG++                 DI+ES+E+ VVP  
Sbjct: 1185 IPRLQEILMTASIDIKTPIMTCPLQEGRTNEDADHLADKLRKVTVADIVESMEVSVVPFA 1244

Query: 1463 IYKDQICRLYKIKIKI------KKHELVSKEDIQETLEIMFLRELEDAIENHVNLLSRIS 1302
            I    +CR+YK+K+K+       ++  +S ED +ETLE++FLRELEDAI+NH+ LLSRIS
Sbjct: 1245 IQDGGVCRIYKLKMKLYRPAHYPQYANISVEDWEETLEVVFLRELEDAIQNHMFLLSRIS 1304

Query: 1301 GIKDFTENIETMSASETGDAVSG---NKLQXXXXXXXXXXXXXXXXXXDAQKRKRQASDE 1131
            GIKDF     + ++ E  + V+G   ++ +                  DAQKRK QA+DE
Sbjct: 1305 GIKDFLPESRSRASGEADEDVAGDMSHREERDDDNDDDDGERADDLGLDAQKRKLQATDE 1364

Query: 1130 IDYEDGIDGKSNEGELT--ELESEIDQTDDQADDEIESSIGHVEDVDVEDEPSN------ 975
            +DY+DG + + NEGE T  E ES  +   DQ D+E E S     DV +++E S       
Sbjct: 1365 MDYDDGFEEELNEGESTASEEESGFESEIDQGDNETEIS----NDVMLDNEASETLPLRK 1420

Query: 974  ----NSLEKGLITESTSTDXXXXXXXXXXXRGPLVRKDSDRSCFVKTKGQHYEVHFRFIN 807
                 S +K   + S               R   + KD DR+ FV+ +  H+EVHF+F N
Sbjct: 1421 PSKPKSKKKAAESPSHGEKSKDKKKKPKAKRKSRISKDFDRAIFVEARKMHFEVHFKFTN 1480

Query: 806  EPHILLSQIVQKVAKKVPLRGSGKIEHCQQLSYDVLEKQVLWXXXXXXXXXXXXKVQKDL 627
            EPHILL++I QK AKKV ++  GKIE C+    D  E QV++               K+ 
Sbjct: 1481 EPHILLAEIAQKTAKKVYIQNPGKIEQCRVT--DCKESQVIYYGKDPKERVDLKPDVKE- 1537

Query: 626  SNLSALKAAGVDITALWEMQDVLDVNHIYSNNIHLMLKTYGVEVARKTIIKEVQDVFKIY 447
              + AL A GVD    W+MQD LDV +IYSNNIH MLKTYGVE AR+TII+E+  VFK Y
Sbjct: 1538 -KVPALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKTYGVEAARETIIREINHVFKSY 1596

Query: 446  GVEIDYRHLSLIADYMTHSGEYRPMSRHGMISESLSPLMKMSFETPSKFIVEAASHGLTD 267
            G+ +  RHLSLIAD+MTH+G YRPMSR G I+ES+SP  KMSFET SKFIVEAA HG  D
Sbjct: 1597 GIAVSNRHLSLIADFMTHTGGYRPMSRMGGIAESISPFSKMSFETASKFIVEAALHGEID 1656

Query: 266  NLETPSARICLGLPVKLGTGSFDLMQNLQI 177
            NLETPSARICLGLPVK+GTGSFDLMQ L+I
Sbjct: 1657 NLETPSARICLGLPVKMGTGSFDLMQKLEI 1686


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score = 1590 bits (4116), Expect = 0.0
 Identities = 868/1619 (53%), Positives = 1095/1619 (67%), Gaps = 33/1619 (2%)
 Frame = -1

Query: 4934 DSNKICKTCGQRSNDCPGHCGHIELVNLVYNPILFDKLYNIIGHTCFYCLRFRMDEEVVK 4755
            D   +CK+CGQR   CPGHCGHI+LV+ VYNP+LF  L+N +  TCF C  FR  E +V+
Sbjct: 65   DETTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVE 124

Query: 4754 LCISQLKMIAKGDIIGARRLDEGYILDTSTSPEDGETSDFQ----DDQSWSSLQFTEASS 4587
             C + L++I  G+I  A+ L+E ++   S +        ++      ++W+SLQF+EA S
Sbjct: 125  NCKTLLELILDGEIAKAKELEEEWMNSKSRTKSSHSMYTYERKNGQPETWTSLQFSEAIS 184

Query: 4586 VLXXXXXXXXXXXXXXXXKNPKISKPAFGWFHMSGLSAVDTRANIIRAVGELSIEKVSHS 4407
            V+                K+PKI+KP FGWFHM GL+ V  RAN IR    +S+   +  
Sbjct: 185  VVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKPVSVSSGA-- 242

Query: 4406 EYTQEAEIDMAESDSCMTTSVETKDSRTKRHVQKVKGASHSSKQNDTFSRTLLPSEVHDI 4227
                E    + E  +   T  + +D   +  +QK   + H           LLPSEV DI
Sbjct: 243  ----EGVSSLEEETTTEATVEDFEDVSPEVFMQKNFSSGH-----------LLPSEVKDI 287

Query: 4226 IKALWANESGILSYICGVQHESLKITNGQTLSHSMFFIEALLVPPAKFRPPAITVDTVSE 4047
            +K LW NE+ + S+I  +  +     +G    HSMFF+E++LVPP KFRPPA   D+V E
Sbjct: 288  LKRLWKNEALLCSFISDISQQG----HGNKAGHSMFFLESVLVPPIKFRPPAKGGDSVME 343

Query: 4046 HTQTAHLSKVXXXXXXXXXXXXNRSEQSNIVRRWLELQQSINLMFDSKTALN---RNAMP 3876
            H QT  L+KV            N+SE S IVR W++LQQSIN++FDSK+A      +A  
Sbjct: 344  HPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILFDSKSAAGPGKNDASL 403

Query: 3875 GICQLLEKKEGIFRQKMMGKRVNHSCRSVISPDPYLAVNEIGIPPYFALRLTYPVRVTPW 3696
            GICQLLEKKEG+FRQKMMGKRVN +CRSVISPDPYLAVNEIGIPPYFALRLTYP RVT W
Sbjct: 404  GICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTAW 463

Query: 3695 NAHKLREAIINGSEIHPGATNFADEVSNCKLPL--GKKARVSISRKLPSSRG---EASAK 3531
            N  KLR AIING E HPGAT++ D+++  KL L   +K+R+SISRKLPSSRG   +    
Sbjct: 464  NVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGCD 523

Query: 3530 SLEMEGKIVYCHMKDGDVVLVNRQPTLHKPSIMAHIVRVLPGEKTIRMHYANCS-TYNAD 3354
              E EGKIV  H++DGD+VLVNRQPTLHKPSIMAH+VRVL GEKTIRMHYANCS TYNAD
Sbjct: 524  DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSITYNAD 583

Query: 3353 FDGDEMNVHLPQDEVSRAEAYNIVNANNQYIVPTRGDTVRGLIQDHIGAAVLLTMKDTFL 3174
            FDGDEMNVH PQDE+SRAEAYNIVNANNQY+ PT G+ +R LIQDHI +AVLLT KDTFL
Sbjct: 584  FDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFL 643

Query: 3173 TRDQYDQLLYSSGVFTAGPXXXXXXXXXXXXKVE-SFGLQPVLPAVWKPKPLWTGKQVIT 2997
              D++ QLLYSSG+ T+               ++    + PVLPAVWKP+PLWTGKQV+T
Sbjct: 644  NFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDAEMLPVLPAVWKPEPLWTGKQVVT 703

Query: 2996 SLLNHLTRGCKPFTLENEGKIPYQYFSRDSSNNRPSKDEEAGA-------ENKLLIRRNE 2838
            +LL+H+T+G  PF +E + KIP  +   D  N++  +  +          ++ LLI +NE
Sbjct: 704  ALLDHITQGSPPFFVEKDVKIPRGFLILDEGNSKKKEHTKVDKLKAARLDDDSLLIFKNE 763

Query: 2837 LVRGVIDKAQFGKYGLVHTVQELYGSDTAGVLLSALSRLFTCFLQMHGFTCGVDDLILLP 2658
            LVRGVIDKAQFG YGLVHTVQELYGS+TAG+LLS +SRLFT FLQ HGFTCGVDDL+L+ 
Sbjct: 764  LVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMSRLFTVFLQTHGFTCGVDDLLLIE 823

Query: 2657 HYDIQR-KXXXXXXXXXXXVHCDFVNFKRG-KIGPKELQYEIEKVMRNNGESAVARLDGK 2484
              D +R K           VH  F+  K G K+ P  LQ  IEK +  NGE+A+  LD K
Sbjct: 824  CMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLNIEKTISYNGEAALTSLDRK 883

Query: 2483 MKNELREK--GSKINKELLLNGLYKPFPKNCISLMTISGAKGSSVNFQQISSSLGQQELE 2310
            M ++L E+   SK+ K+LL  GL KP  KNCISLMT SGAKG + NFQQISS LGQQ+LE
Sbjct: 884  MTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTANFQQISSHLGQQQLE 943

Query: 2309 GKRVPRMTSGKTLPSFSPWDFSSRAGGYITDRFLTGLRPQEYYFHCMAGREGLVDTAVKT 2130
            GKRVPRM SGKTLP F PWD++SRAGG+I DRFLTGLRPQEYYFHCMAGREGLVDTAVKT
Sbjct: 944  GKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKT 1003

Query: 2129 SRSGYLQRCLVKNLECLKVCYDYTVRDADGSIVQFFYGEDGVDVHQTSFLNKFDALAKNR 1950
            SRSGYLQRCL+KNLE LK+CYD+TVRDADGS++QF YGEDGVDVH+T+F+ KF+ALA N+
Sbjct: 1004 SRSGYLQRCLIKNLESLKICYDHTVRDADGSVIQFQYGEDGVDVHKTAFITKFEALAANQ 1063

Query: 1949 EIIGQKIHHKL-EYNAYIKKLPNKLKERVDELTNISLKGQSSSDELKERDLLMLMKQKYL 1773
            +++ +  HH+L +YN +I +LP+ L+E+ + + N   K +     LKE D + L++ KYL
Sbjct: 1064 DMLYENSHHQLGKYNVFINELPSALREKGEFIYNSLSKDKVPGLVLKE-DFIRLLENKYL 1122

Query: 1772 SSLAQPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTATSVIKT 1593
            SSLAQPGEPVGV+AAQS+GEPSTQMTLNTFH AGRGEMNVTLGIPRLQEILMTA+  IKT
Sbjct: 1123 SSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASQDIKT 1182

Query: 1592 PIVTCRLLEGKSXXXXXXXXXXXXXXXXXDIIESVEICVVPLYIYKDQICRLYKIKIKI- 1416
            PI+TC L EG S                 DIIES+ + VVP    K +IC +YK++I   
Sbjct: 1183 PIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQRKREICSIYKLRIDFY 1242

Query: 1415 -----KKHELVSKEDIQETLEIMFLRELEDAIENHVNLLSRISGIKDFTENIETMSASET 1251
                  +H  +S ED++ TLE +FL ELE  IE  + LLS+I+GIK F  + ++  +SE 
Sbjct: 1243 PLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKINGIKXFVPDSQSKGSSEG 1302

Query: 1250 GDAVSGNKLQXXXXXXXXXXXXXXXXXXDAQKRKRQASDEIDYEDGIDGKSNEGE-LTEL 1074
             +  S  + +                  D +K+K QA+DE+DYED  +   N  E  T  
Sbjct: 1303 DEVSSSRQEEMDDDDEGNDLDVAEDLGSDXEKQKLQANDEMDYEDDSEDDLNAKESSTGF 1362

Query: 1073 ESEIDQTDDQADDEIESSIGHVEDVDVEDEPSNNSLEKGLITESTSTDXXXXXXXXXXXR 894
            ESE+DQ  D+A+      I  V+D   E++P    + K +  E T+             +
Sbjct: 1363 ESEVDQ-GDEAEITNNDMIEIVKDSASENQPEIVDVSKSMSKEKTT----ETSKEKKKVK 1417

Query: 893  GPLVRKDSDRSCFVKTKGQHYEVHFRFINEPHILLSQIVQKVAKKVPLRGSGKIEHCQQL 714
              LVRK++DRS FV+ K  H+EVHF+F NEPH LLSQIVQ+ A+KV ++ SGKI  CQQ+
Sbjct: 1418 SELVRKETDRSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQQI 1477

Query: 713  SYDVLEKQVLWXXXXXXXXXXXXKVQKDLSNLSALKAAGVDITALWEMQDVLDVNHIYSN 534
            +    E QV++              +K+   + AL+ +GVD   LWEMQD LDV +IYSN
Sbjct: 1478 T--CKEGQVIYHGNNLKERKNLKPEEKE--KIPALQTSGVDFKTLWEMQDELDVRYIYSN 1533

Query: 533  NIHLMLKTYGVEVARKTIIKEVQDVFKIYGVEIDYRHLSLIADYMTHSGEYRPMSRHGMI 354
            +IH ML+TYGVE AR TII+E+Q++F  YG+ ++ RHLSL+ADYMTHSG YRPMSR G I
Sbjct: 1534 DIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGGI 1593

Query: 353  SESLSPLMKMSFETPSKFIVEAASHGLTDNLETPSARICLGLPVKLGTGSFDLMQNLQI 177
            S+S+SP  +M+FET  KFIV+AA HG  DNLETPS+RICLGLPVK+GTGSFDLMQ +++
Sbjct: 1594 SDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQKIEV 1652


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score = 1588 bits (4111), Expect = 0.0
 Identities = 873/1624 (53%), Positives = 1098/1624 (67%), Gaps = 38/1624 (2%)
 Frame = -1

Query: 4934 DSNKICKTCGQRSNDCPGHCGHIELVNLVYNPILFDKLYNIIGHTCFYCLRFRMDEEVVK 4755
            D   +CK+CGQR   CPGHCGHI+LV+ VYNP+LF  L+N +  TCF C  FR  E +V+
Sbjct: 59   DETTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVE 118

Query: 4754 LCISQLKMIAKGDIIGARRLDEGYILDTSTSPEDGETSDFQ----DDQSWSSLQFTEASS 4587
             C + L++I  G+I  A+ L+E ++   S +        ++      ++W+SLQF+EA S
Sbjct: 119  NCKTLLELILDGEIAKAKELEEEWMNSKSRTKSSHSMYTYERKNGQPETWTSLQFSEAIS 178

Query: 4586 VLXXXXXXXXXXXXXXXXKNPKISKPAFGWFHMSGLSAVDTRANIIRAVGELSIEKVSHS 4407
            V+                K+PKI+KP FGWFHM GL+ V  RAN IR    +S+   +  
Sbjct: 179  VVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKPVSVSSGA-- 236

Query: 4406 EYTQEAEIDMAESDSCMTTSVETKDSRTKRHVQKVKGASHSSKQNDTFSRTLLPSEVHDI 4227
                E    + E  +   T  + +D   +  +QK   + H           LLPSEV DI
Sbjct: 237  ----EGVSSLEEETTTEATVEDFEDVSPEVFMQKNFSSGH-----------LLPSEVKDI 281

Query: 4226 IKALWANESGILSYICGVQHESLKITNGQTLSHSMFFIEALLVPPAKFRPPAITVDTVSE 4047
            +K LW NE+ + S+I  +  +     +G    HSMFF+E++LVPP KFRPPA   D+V E
Sbjct: 282  LKRLWKNEALLCSFISDISQQG----HGNKAGHSMFFLESVLVPPIKFRPPAKGGDSVME 337

Query: 4046 HTQTAHLSKVXXXXXXXXXXXXNRSEQSNIVRRWLELQQSINLMFDSKTALN---RNAMP 3876
            H QT  L+KV            N+SE S IVR W++LQQSIN++FDSK+A      +A  
Sbjct: 338  HPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILFDSKSAAGPGKNDASL 397

Query: 3875 GICQLLEKKEGIFRQKMMGKRVNHSCRSVISPDPYLAVNEIGIPPYFALRLTYPVRVTPW 3696
            GICQLLEKKEG+FRQKMMGKRVN +CRSVISPDPYLAVNEIGIPPYFALRLTYP RVT W
Sbjct: 398  GICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTAW 457

Query: 3695 NAHKLREAIINGSEIHPGATNFADEVSNCKLPL--GKKARVSISRKLPSSRG---EASAK 3531
            N  KLR AIING E HPGAT++ D+++  KL L   +K+R+SISRKLPSSRG   +    
Sbjct: 458  NVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGCD 517

Query: 3530 SLEMEGKIVYCHMKDGDVVLVNRQPTLHKPSIMAHIVRVLPGEKTIRMHYANCS-TYNAD 3354
              E EGKIV  H++DGD+VLVNRQPTLHKPSIMAH+VRVL GEKTIRMHYANCS TYNAD
Sbjct: 518  DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSITYNAD 577

Query: 3353 FDGDEMNVHLPQDEVSRAEAYNIVNANNQYIVPTRGDTVRGLIQDHIGAAVLLTMKDTFL 3174
            FDGDEMNVH PQDE+SRAEAYNIVNANNQY+ PT G+ +R LIQDHI +AVLLT KDTFL
Sbjct: 578  FDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFL 637

Query: 3173 TRDQYDQLLYSSGVFTAGPXXXXXXXXXXXXKVE-SFGLQPVLPAVWKPKPLWTGKQVIT 2997
              D++ QLLYSSG+ T+               ++    + PVLPAVWKP+PLWTGKQV+T
Sbjct: 638  NFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDAEMLPVLPAVWKPEPLWTGKQVVT 697

Query: 2996 SLLNHLTRGCKPFTLENEGKIPYQYFS-RDSSNNRPSKDEEAGAE---------NKLLIR 2847
            +LL+H+T+G  PF +E + KIP  +F  RD  NN   K E    +         + LLI 
Sbjct: 698  ALLDHITQGSPPFFVEKDVKIPRGFFKCRDMGNNSSKKKEHTKVDKLKAARLDDDSLLIF 757

Query: 2846 RNELVRGVIDKAQFGKYGLVHTVQELYGSDTAGVLLSALSRLFTCFLQMHGFTCGVDDLI 2667
            +NELVRGVIDKAQFG YGLVHTVQELYGS+TAG+LLS +SRLFT FLQ HGFTCGVDDL+
Sbjct: 758  KNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMSRLFTVFLQTHGFTCGVDDLL 817

Query: 2666 LLPHYDIQR-KXXXXXXXXXXXVHCDFVNFKRG-KIGPKELQYEIEKVMRNNGESAVARL 2493
            L+   D +R K           VH  F+  K G K+ P  LQ  IEK +  NGE+A+  L
Sbjct: 818  LIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLNIEKTISYNGEAALTSL 877

Query: 2492 DGKMKNELREK--GSKINKELLLNGLYKPFPKNCISLMTISGAKGSSVNFQQISSSLGQQ 2319
            D KM ++L E+   SK+ K+LL  GL KP  KNCISLMT SGAKG + NFQQISS LGQQ
Sbjct: 878  DRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTANFQQISSHLGQQ 937

Query: 2318 ELEGKRVPRMTSGKTLPSFSPWDFSSRAGGYITDRFLTGLRPQEYYFHCMAGREGLVDTA 2139
            +LEGKRVPRM SGKTLP F PWD++SRAGG+I DRFLTGLRPQEYYFHCMAGREGLVDTA
Sbjct: 938  QLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRPQEYYFHCMAGREGLVDTA 997

Query: 2138 VKTSRSGYLQRCLVKNLECLKVCYDYTVRDADGSIVQFFYGEDGVDVHQTSFLNKFDALA 1959
            VKTSRSGYLQRCL+KNLE LK+CYD+TVRDADGS++QF YGEDGVDVH+T+F+ KF+ALA
Sbjct: 998  VKTSRSGYLQRCLIKNLESLKICYDHTVRDADGSVIQFQYGEDGVDVHKTAFITKFEALA 1057

Query: 1958 KNREIIGQKIHHKL-EYNAYIKKLPNKLKERVDELTNISLKGQSSSDELKERDLLMLMKQ 1782
             N++++ +  HH+L +YN +I +LP+ L+E+ + + N   K +     LKE D + L++ 
Sbjct: 1058 ANQDMLYENSHHQLGKYNVFINELPSALREKGEFIYNSLSKDKVPGLVLKE-DFIRLLEN 1116

Query: 1781 KYLSSLAQPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTATSV 1602
            KYLSSLAQPGEPVGV+AAQS+GEPSTQMTLNTFH  GRGEMNVTLGI RLQEILMTA+  
Sbjct: 1117 KYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHVGRGEMNVTLGILRLQEILMTASQD 1176

Query: 1601 IKTPIVTCRLLEGKSXXXXXXXXXXXXXXXXXDIIESVEICVVPLYIYKDQICRLYKIKI 1422
            IKTPI+TC L EG S                 DIIES+ + VVP    K +IC +YK++I
Sbjct: 1177 IKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQRKREICSIYKLRI 1236

Query: 1421 KI------KKHELVSKEDIQETLEIMFLRELEDAIENHVNLLSRISGIKDFTENIETMSA 1260
                     +H  +S ED++ TLE +FL ELE  IE  + LLS+I+GIK+F  + ++  +
Sbjct: 1237 DFYPLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKINGIKNFVPDSQSKGS 1296

Query: 1259 SETGDAVSGNKLQXXXXXXXXXXXXXXXXXXDA--QKRKRQASDEIDYEDGIDGKSNEGE 1086
            SE GD VS ++ +                   +  +K+K QA+DE+DYED  +   N  E
Sbjct: 1297 SE-GDEVSSSRQKENDDDDDEGNDLDVAEDLGSDMKKQKLQANDEMDYEDDSEDDLNAKE 1355

Query: 1085 -LTELESEIDQTDDQADDEIESSIGHVEDVDVEDEPSNNSLEKGLITESTSTDXXXXXXX 909
              T  ESE+DQ  D+A+      I  V+D   E++P    + K +  E T+         
Sbjct: 1356 SSTGFESEVDQ-GDEAEITNNDMIEIVKDSASENQPEIVDVSKSMSKEKTT----ETSKE 1410

Query: 908  XXXXRGPLVRKDSDRSCFVKTKGQHYEVHFRFINEPHILLSQIVQKVAKKVPLRGSGKIE 729
                +  LVRK++DRS FV+ K  H+EVHF+F NEPH LLSQIVQ+ A+KV ++ SGKI 
Sbjct: 1411 KKKVKSELVRKETDRSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKII 1470

Query: 728  HCQQLSYDVLEKQVLWXXXXXXXXXXXXKVQKDLSNLSALKAAGVDITALWEMQDVLDVN 549
             CQQ++    E QV++              +K+   + AL+ +GVD   LWEMQD LDV 
Sbjct: 1471 QCQQIT--CKEGQVIYHGNNLKERKNLKPEEKE--KIPALQTSGVDFKTLWEMQDELDVR 1526

Query: 548  HIYSNNIHLMLKTYGVEVARKTIIKEVQDVFKIYGVEIDYRHLSLIADYMTHSGEYRPMS 369
            +IYSN+IH ML+TYGVE AR TII+E+Q++F  YG+ ++ RHLSL+ADYMTHSG YRPMS
Sbjct: 1527 YIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMS 1586

Query: 368  RHGMISESLSPLMKMSFETPSKFIVEAASHGLTDNLETPSARICLGLPVKLGTGSFDLMQ 189
            R G IS+S+SP  +M+FET  KFIV+AA HG  DNLETPS+RICLGLPVK+GTGSFDLMQ
Sbjct: 1587 RLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQ 1646

Query: 188  NLQI 177
             +++
Sbjct: 1647 KIEV 1650