BLASTX nr result
ID: Angelica22_contig00000738
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00000738
(4103 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 2227 0.0
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 2211 0.0
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta... 2209 0.0
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su... 2202 0.0
ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su... 2196 0.0
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 2227 bits (5770), Expect = 0.0
Identities = 1105/1175 (94%), Positives = 1129/1175 (96%)
Frame = -2
Query: 3970 EEEYDPAYNEDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDESADI 3791
EEEYDP EDE E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 6 EEEYDPTM-EDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 64
Query: 3790 EIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLTYSAP 3611
EIRPESQHNPGHQ+DFAETIYKISFGQI+LSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 65 EIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 124
Query: 3610 LYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELGECPY 3431
LY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTELGECPY
Sbjct: 125 LYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 184
Query: 3430 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVR 3251
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPSTMFVR
Sbjct: 185 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVR 244
Query: 3250 MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 3071
MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL
Sbjct: 245 MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 304
Query: 3070 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETK 2891
LRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETK
Sbjct: 305 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETK 364
Query: 2890 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVRGYVQ 2711
KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVRGYVQ
Sbjct: 365 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 424
Query: 2710 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 2531
KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH
Sbjct: 425 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 484
Query: 2530 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSAAYPI 2351
LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSAAYPI
Sbjct: 485 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 544
Query: 2350 LEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVG 2171
LEFLEEWGTENFEEISPAVI QATKIFVNGCWVGIHRDPDM VNTEVG
Sbjct: 545 LEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVG 604
Query: 2170 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLVAKGF 1991
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI+RKDI+ALQQ+E+PEDGGWHDLVAKGF
Sbjct: 605 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGF 664
Query: 1990 XXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 1811
INDL SAR NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665 IEYIDTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN 724
Query: 1810 QSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 1631
QSPRNTYQSAMGKQAMGIYVTN+QFRMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784
Query: 1630 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1451
AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 785 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 844
Query: 1450 MGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDHSTSLR 1271
MGMRHGSYDKLDDDGLAPPGTR SGEDV+IGKTTPIAQD+A QG A+RYTRRDHSTSLR
Sbjct: 845 MGMRHGSYDKLDDDGLAPPGTRVSGEDVVIGKTTPIAQDEA-QGP-AARYTRRDHSTSLR 902
Query: 1270 HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT 1091
HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT
Sbjct: 903 HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT 962
Query: 1090 VEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKC 911
+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKC
Sbjct: 963 MEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKC 1022
Query: 910 GYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR 731
GYQMRGFETMYNGHTGRRLT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR
Sbjct: 1023 GYQMRGFETMYNGHTGRRLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR 1082
Query: 730 SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNSFECR 551
SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCE+CGL+AIANLKKNSFECR
Sbjct: 1083 SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECR 1142
Query: 550 SCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 446
CKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT
Sbjct: 1143 GCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 1177
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
Full=DNA-directed RNA polymerase II subunit RPB2;
Short=RNA polymerase II subunit 2; Short=RNA polymerase
II subunit B2; AltName: Full=DNA-directed RNA polymerase
II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 2211 bits (5729), Expect = 0.0
Identities = 1095/1179 (92%), Positives = 1129/1179 (95%), Gaps = 1/1179 (0%)
Frame = -2
Query: 3979 MDMEEEYDPAYN-EDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDE 3803
MDME+EY+P YN +D+ E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDMEDEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3802 SADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLT 3623
SADIEIRPESQHNPGHQ+DFAETIYKI+FGQI+LSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3622 YSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELG 3443
YSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTELG
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 3442 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPST 3263
ECP DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMA++QNRPPST
Sbjct: 181 ECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMADTQNRPPST 240
Query: 3262 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQ 3083
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQ
Sbjct: 241 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQ 300
Query: 3082 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 2903
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 360
Query: 2902 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVR 2723
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVR
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 2722 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2543
GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 2542 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSA 2363
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 2362 AYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 2183
AYPILEFLEEWGTENFEEISPAVI QATKIFVNG WVGIHRDPDM VN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVN 600
Query: 2182 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLV 2003
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRL+I++KDI+ LQQ+ESP++GGWHDLV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLV 660
Query: 2002 AKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPF 1823
AKG+ INDL AR NP +AYSDTYTHCEIHPSLILGVCASIIPF
Sbjct: 661 AKGYIEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPF 720
Query: 1822 PDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1643
PDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780
Query: 1642 AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 1463
AGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 781 AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 840
Query: 1462 RANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDHS 1283
RA+TMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+QDDA QGQ ASRYTR+DHS
Sbjct: 841 RASTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDA-QGQ-ASRYTRKDHS 898
Query: 1282 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 1103
TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 899 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 958
Query: 1102 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 923
MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 959 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1018
Query: 922 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 743
LHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1019 LHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1078
Query: 742 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNS 563
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLKKNS
Sbjct: 1079 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1138
Query: 562 FECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 446
FECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 1194
Score = 2209 bits (5724), Expect = 0.0
Identities = 1098/1182 (92%), Positives = 1127/1182 (95%), Gaps = 4/1182 (0%)
Frame = -2
Query: 3979 MDMEEEYDPAYNED----EGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEI 3812
M+ ++EYD NED + ++ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MEDDQEYDQNLNEDYEDEDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3811 VDESADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLR 3632
VDESADIEIRPESQHNPGHQ+DFAETIYKISFGQI+LSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3631 NLTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLT 3452
NLTYSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLT
Sbjct: 121 NLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3451 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 3272
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 3271 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFA 3092
PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+
Sbjct: 241 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 3091 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGV 2912
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGV
Sbjct: 301 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360
Query: 2911 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTR 2732
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2731 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2552
DVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2551 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTV 2372
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 2371 GSAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 2192
GSAAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCWVGIHRDPDM
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRV 600
Query: 2191 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWH 2012
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI++KDI ALQQ+ES E+GGWH
Sbjct: 601 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWH 660
Query: 2011 DLVAKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASI 1832
DLVAKGF I+DL AR NPEEAYSDTYTHCEIHPSLILGVCASI
Sbjct: 661 DLVAKGFIEYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASI 720
Query: 1831 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1652
IPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1651 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1472
QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1471 RPDRANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRR 1292
RPDRANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPIAQ++A QGQ ++RYTRR
Sbjct: 841 RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEA-QGQ-SARYTRR 898
Query: 1291 DHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 1112
DHS SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT
Sbjct: 899 DHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 958
Query: 1111 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 932
QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI
Sbjct: 959 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 1018
Query: 931 SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 752
SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT
Sbjct: 1019 SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 1078
Query: 751 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLK 572
RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLK
Sbjct: 1079 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLK 1138
Query: 571 KNSFECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 446
KNSFECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 KNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max]
Length = 1192
Score = 2202 bits (5707), Expect = 0.0
Identities = 1096/1182 (92%), Positives = 1126/1182 (95%), Gaps = 4/1182 (0%)
Frame = -2
Query: 3979 MDMEEE--YDPAY--NEDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEI 3812
MD+EEE YD ED+ E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLEEEQEYDEQMMEEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3811 VDESADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLR 3632
VDESADIEIRPESQHNPGHQ+DFAETIYKISFGQI+LSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3631 NLTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLT 3452
NLTYSAPLY DVSKRVIKKGHDGEEVTE QDF KVFIGKVPIMLRSSYCTLYQN+EKDLT
Sbjct: 121 NLTYSAPLYVDVSKRVIKKGHDGEEVTEAQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3451 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 3272
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 3271 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFA 3092
PSTMFVRMLSRTS+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+
Sbjct: 241 PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 3091 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGV 2912
TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGV
Sbjct: 301 YTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360
Query: 2911 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTR 2732
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2731 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2552
DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2551 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTV 2372
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 2371 GSAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 2192
GSAAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCW+GIHRDPDM
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRV 600
Query: 2191 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWH 2012
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLI++KDI ALQQ+ESPEDGGWH
Sbjct: 601 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWH 660
Query: 2011 DLVAKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASI 1832
DLV+KGF INDL AR NPE+AYSDTYTHCEIHPSLILGVCASI
Sbjct: 661 DLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYSDTYTHCEIHPSLILGVCASI 720
Query: 1831 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1652
IPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1651 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1472
QLPAGINAIV+IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVSIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1471 RPDRANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRR 1292
RPDRANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+Q++A QGQ A RYTRR
Sbjct: 841 RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEA-QGQ-ALRYTRR 898
Query: 1291 DHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 1112
DHS SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT
Sbjct: 899 DHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 958
Query: 1111 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 932
QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI
Sbjct: 959 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 1018
Query: 931 SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 752
SKALHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT
Sbjct: 1019 SKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 1078
Query: 751 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLK 572
RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLK
Sbjct: 1079 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLK 1138
Query: 571 KNSFECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 446
KNSFECR CKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 KNSFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max]
Length = 1193
Score = 2196 bits (5690), Expect = 0.0
Identities = 1093/1182 (92%), Positives = 1124/1182 (95%), Gaps = 4/1182 (0%)
Frame = -2
Query: 3979 MDMEEE--YDPAYNE--DEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEI 3812
MD+EEE YD E D+ E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLEEEQEYDEQMMEEDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3811 VDESADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLR 3632
VDESADIEIRPESQHNPGHQ+DFAETIYKISFGQI+LSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3631 NLTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLT 3452
NLTYSAPLY DVSKRV+KKGHDGEEVTETQD KVFIGKVPIMLRSSYCTLYQN+EKDLT
Sbjct: 121 NLTYSAPLYVDVSKRVVKKGHDGEEVTETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3451 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 3272
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 3271 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFA 3092
PSTMFVRMLSRTS+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+
Sbjct: 241 PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 3091 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGV 2912
DT MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGV
Sbjct: 301 DTLMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360
Query: 2911 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTR 2732
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2731 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2552
DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2551 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTV 2372
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 2371 GSAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 2192
GSAAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCW+GIHRDPDM
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRV 600
Query: 2191 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWH 2012
VNTEVGVVRDI LKELRIYTDYGRCSRPLFIV+KQRLLI++KDI ALQQ+ESPEDGGWH
Sbjct: 601 DVNTEVGVVRDIILKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWH 660
Query: 2011 DLVAKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASI 1832
DLV+KGF INDL AR NPE+AY+ TYTHCEIHPSLILGVCASI
Sbjct: 661 DLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYAGTYTHCEIHPSLILGVCASI 720
Query: 1831 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1652
IPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1651 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1472
QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1471 RPDRANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRR 1292
RPDRANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+Q++A QGQ A RYTRR
Sbjct: 841 RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEA-QGQ-ALRYTRR 898
Query: 1291 DHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 1112
DHS SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT
Sbjct: 899 DHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 958
Query: 1111 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 932
QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI
Sbjct: 959 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 1018
Query: 931 SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 752
SKALHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT
Sbjct: 1019 SKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 1078
Query: 751 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLK 572
RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLK
Sbjct: 1079 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLK 1138
Query: 571 KNSFECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 446
KNSFECR CKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 KNSFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1180