BLASTX nr result

ID: Angelica22_contig00000649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00000649
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284393.1| PREDICTED: 40S ribosomal protein S19-3 [Viti...   235   3e-60
ref|NP_200925.1| 40S ribosomal protein S19-3 [Arabidopsis thalia...   231   4e-59
ref|XP_002323893.1| predicted protein [Populus trichocarpa] gi|1...   230   1e-58
ref|NP_186857.1| 40S ribosomal protein S19-1 [Arabidopsis thalia...   229   1e-58
ref|XP_002884301.1| 40S ribosomal protein S19 [Arabidopsis lyrat...   229   1e-58

>ref|XP_002284393.1| PREDICTED: 40S ribosomal protein S19-3 [Vitis vinifera]
           gi|147858266|emb|CAN83920.1| hypothetical protein
           VITISV_028810 [Vitis vinifera]
           gi|297733901|emb|CBI15148.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score =  235 bits (600), Expect = 3e-60
 Identities = 112/124 (90%), Positives = 117/124 (94%)
 Frame = -1

Query: 533 YAAHLKRSGKMELPHWTDIVKTGTFKELAPYDEDWYYIRAASMARKIYLRGGLGVGAFRR 354
           YAAHLKRSGK+ELPHWTDIVKT TFKELAPYD DWYYIRAASMARKIYLRGG+GVGAFRR
Sbjct: 19  YAAHLKRSGKIELPHWTDIVKTATFKELAPYDPDWYYIRAASMARKIYLRGGIGVGAFRR 78

Query: 353 IYGGSKRNGSAPPHFCKSSGGIARHILQQLQTMNIVDFDSKGGRKITSSGQRDLDQVAGT 174
           IYGGSKRNGS PPHFCKSSG IARHILQQLQTMNI++ DSKGGR+ITSSGQRDLDQVAG 
Sbjct: 79  IYGGSKRNGSRPPHFCKSSGSIARHILQQLQTMNIIELDSKGGRRITSSGQRDLDQVAGR 138

Query: 173 IVVA 162
           I VA
Sbjct: 139 IAVA 142


>ref|NP_200925.1| 40S ribosomal protein S19-3 [Arabidopsis thaliana]
           gi|297793669|ref|XP_002864719.1| 40S ribosomal protein
           S19 [Arabidopsis lyrata subsp. lyrata]
           gi|27923837|sp|Q9FNP8.1|RS193_ARATH RecName: Full=40S
           ribosomal protein S19-3 gi|9759463|dbj|BAB10379.1| 40S
           ribosomal protein S19 [Arabidopsis thaliana]
           gi|34365671|gb|AAQ65147.1| At5g61170 [Arabidopsis
           thaliana] gi|51970120|dbj|BAD43752.1| 40S ribosomal
           protein S19 - like [Arabidopsis thaliana]
           gi|297310554|gb|EFH40978.1| 40S ribosomal protein S19
           [Arabidopsis lyrata subsp. lyrata]
           gi|332010047|gb|AED97430.1| 40S ribosomal protein S19-3
           [Arabidopsis thaliana]
          Length = 143

 Score =  231 bits (590), Expect = 4e-59
 Identities = 111/124 (89%), Positives = 115/124 (92%)
 Frame = -1

Query: 533 YAAHLKRSGKMELPHWTDIVKTGTFKELAPYDEDWYYIRAASMARKIYLRGGLGVGAFRR 354
           YAAHLKRSGK+ELP WTDIVKTG  KELAPYD DWYYIRAASMARK+YLRGGLGVGAFRR
Sbjct: 19  YAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRR 78

Query: 353 IYGGSKRNGSAPPHFCKSSGGIARHILQQLQTMNIVDFDSKGGRKITSSGQRDLDQVAGT 174
           IYGGSKRNGS PPHFCKSSGG+ARHILQQLQTMNIVD D+KGGRKITSSGQRDLDQVAG 
Sbjct: 79  IYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSGQRDLDQVAGR 138

Query: 173 IVVA 162
           I  A
Sbjct: 139 IAAA 142


>ref|XP_002323893.1| predicted protein [Populus trichocarpa] gi|118487378|gb|ABK95517.1|
           unknown [Populus trichocarpa]
           gi|222866895|gb|EEF04026.1| predicted protein [Populus
           trichocarpa]
          Length = 143

 Score =  230 bits (586), Expect = 1e-58
 Identities = 109/125 (87%), Positives = 116/125 (92%)
 Frame = -1

Query: 533 YAAHLKRSGKMELPHWTDIVKTGTFKELAPYDEDWYYIRAASMARKIYLRGGLGVGAFRR 354
           Y+AHLKRSGK+ELP WTDIVKTG FKELAPYD DWYY+RAASMARKIY+RGGLGVGAFRR
Sbjct: 19  YSAHLKRSGKIELPLWTDIVKTGKFKELAPYDPDWYYVRAASMARKIYIRGGLGVGAFRR 78

Query: 353 IYGGSKRNGSAPPHFCKSSGGIARHILQQLQTMNIVDFDSKGGRKITSSGQRDLDQVAGT 174
           IYGGSKRNGS PPHFCKSSG IARHILQQLQ +NI+D D KGGR+ITSSGQRDLDQVAG 
Sbjct: 79  IYGGSKRNGSRPPHFCKSSGSIARHILQQLQNVNIIDIDPKGGRRITSSGQRDLDQVAGR 138

Query: 173 IVVAP 159
           IVVAP
Sbjct: 139 IVVAP 143


>ref|NP_186857.1| 40S ribosomal protein S19-1 [Arabidopsis thaliana]
           gi|27923843|sp|Q9SGA6.1|RS191_ARATH RecName: Full=40S
           ribosomal protein S19-1
           gi|6513924|gb|AAF14828.1|AC011664_10 putative 40S
           ribosomal protein S19 [Arabidopsis thaliana]
           gi|13878029|gb|AAK44092.1|AF370277_1 putative 40S
           ribosomal protein S19 [Arabidopsis thaliana]
           gi|17104595|gb|AAL34186.1| putative 40S ribosomal
           protein S19 [Arabidopsis thaliana]
           gi|21593712|gb|AAM65679.1| putative 40S ribosomal
           protein S19 [Arabidopsis thaliana]
           gi|332640239|gb|AEE73760.1| 40S ribosomal protein S19-1
           [Arabidopsis thaliana]
          Length = 143

 Score =  229 bits (585), Expect = 1e-58
 Identities = 109/125 (87%), Positives = 116/125 (92%)
 Frame = -1

Query: 533 YAAHLKRSGKMELPHWTDIVKTGTFKELAPYDEDWYYIRAASMARKIYLRGGLGVGAFRR 354
           YA+HLKRSGK+ELP WTDIVKTG  KELAPYD DWYYIRAASMARK+YLRGGLGVGAFRR
Sbjct: 19  YASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRR 78

Query: 353 IYGGSKRNGSAPPHFCKSSGGIARHILQQLQTMNIVDFDSKGGRKITSSGQRDLDQVAGT 174
           IYGGSKRNGS PPHFCKSSGGIARHILQQL+TMNIV+ D+KGGR+ITSSGQRDLDQVAG 
Sbjct: 79  IYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSSGQRDLDQVAGR 138

Query: 173 IVVAP 159
           I V P
Sbjct: 139 IAVEP 143


>ref|XP_002884301.1| 40S ribosomal protein S19 [Arabidopsis lyrata subsp. lyrata]
           gi|297330141|gb|EFH60560.1| 40S ribosomal protein S19
           [Arabidopsis lyrata subsp. lyrata]
          Length = 142

 Score =  229 bits (585), Expect = 1e-58
 Identities = 109/125 (87%), Positives = 116/125 (92%)
 Frame = -1

Query: 533 YAAHLKRSGKMELPHWTDIVKTGTFKELAPYDEDWYYIRAASMARKIYLRGGLGVGAFRR 354
           YA+HLKRSGK+ELP WTDIVKTG  KELAPYD DWYYIRAASMARK+YLRGGLGVGAFRR
Sbjct: 18  YASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRR 77

Query: 353 IYGGSKRNGSAPPHFCKSSGGIARHILQQLQTMNIVDFDSKGGRKITSSGQRDLDQVAGT 174
           IYGGSKRNGS PPHFCKSSGGIARHILQQL+TMNIV+ D+KGGR+ITSSGQRDLDQVAG 
Sbjct: 78  IYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSSGQRDLDQVAGR 137

Query: 173 IVVAP 159
           I V P
Sbjct: 138 IAVEP 142


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