BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00000387
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326357.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-28
ref|XP_002323470.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-27
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c...    75   4e-27
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...    75   4e-27
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    79   1e-26

>ref|XP_002326357.1| predicted protein [Populus trichocarpa] gi|222833550|gb|EEE72027.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score = 79.0 bits (193), Expect(2) = 5e-28
 Identities = 37/42 (88%), Positives = 39/42 (92%)
 Frame = +3

Query: 3   EVIYDKITGRSRGFAFVTMSTVEEVEAAVQQFNGYELDGRPL 128
           EV YDK+TGRSRGF FVTMST+EEVEAA QQFNGYELDGRPL
Sbjct: 121 EVKYDKVTGRSRGFGFVTMSTIEEVEAASQQFNGYELDGRPL 162



 Score = 70.5 bits (171), Expect(2) = 5e-28
 Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 2/52 (3%)
 Frame = +1

Query: 235 ENSFRAPRG--GGRSFDNNNRLYVGNLSWDVDNVALESLFSEQGKVLDAKVV 384
           ENSF    G  GG +FD++NR+YVGNLSW+VD+ ALESLF E+GKV+DAKVV
Sbjct: 183 ENSFSRGPGARGGETFDSSNRVYVGNLSWNVDDSALESLFREKGKVMDAKVV 234



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/42 (59%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   EVIYDKITGRSRGFAFVTMSTVEEVEAAVQQFNGYELDGRPL 128
           +V+YD+ +GRS+GF FVT S+ EEVE AV   NG ELDGR +
Sbjct: 232 KVVYDRDSGRSKGFGFVTYSSAEEVEDAVDSLNGAELDGRAI 273


>ref|XP_002323470.1| predicted protein [Populus trichocarpa] gi|222868100|gb|EEF05231.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score = 75.9 bits (185), Expect(2) = 2e-27
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = +3

Query: 3   EVIYDKITGRSRGFAFVTMSTVEEVEAAVQQFNGYELDGRPL 128
           EVIYDK+TGRSRGF FVTM+T+EEVEAA +QFNGYELDGR L
Sbjct: 120 EVIYDKVTGRSRGFGFVTMTTIEEVEAASKQFNGYELDGRTL 161



 Score = 71.2 bits (173), Expect(2) = 2e-27
 Identities = 35/51 (68%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
 Frame = +1

Query: 235 ENSF-RAPRGGGRSFDNNNRLYVGNLSWDVDNVALESLFSEQGKVLDAKVV 384
           E+SF R PRGG  +FD+ NR+YVGNLSW+VDN+ALE+LF E+G+V+DAKVV
Sbjct: 172 ESSFSRGPRGG-ETFDSGNRVYVGNLSWNVDNLALETLFREKGRVMDAKVV 221



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   EVIYDKITGRSRGFAFVTMSTVEEVEAAVQQFNGYELDGRPL 128
           +V+YD+ +GRSRGF FVT S+ EEV+ A+   NG ELDGR +
Sbjct: 219 KVVYDRDSGRSRGFGFVTYSSAEEVDNAIDSLNGAELDGRAI 260


>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
           RNA binding protein 30 [Nicotiana plumbaginifolia]
          Length = 279

 Score = 75.1 bits (183), Expect(2) = 4e-27
 Identities = 36/42 (85%), Positives = 38/42 (90%)
 Frame = +3

Query: 3   EVIYDKITGRSRGFAFVTMSTVEEVEAAVQQFNGYELDGRPL 128
           EVIYDK+TGRSRGF FVTMS+ EEVEAA QQFNGYELDGR L
Sbjct: 117 EVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRAL 158



 Score = 71.2 bits (173), Expect(2) = 4e-27
 Identities = 34/49 (69%), Positives = 41/49 (83%)
 Frame = +1

Query: 238 NSFRAPRGGGRSFDNNNRLYVGNLSWDVDNVALESLFSEQGKVLDAKVV 384
           +SFR    GG SFD++NR+YVGNL+W VD  ALE+LFSEQGKV+DAKVV
Sbjct: 178 SSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVV 226


>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
           Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
           29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score = 75.1 bits (183), Expect(2) = 4e-27
 Identities = 36/42 (85%), Positives = 38/42 (90%)
 Frame = +3

Query: 3   EVIYDKITGRSRGFAFVTMSTVEEVEAAVQQFNGYELDGRPL 128
           EVIYDK+TGRSRGF FVTMS+ EEVEAA QQFNGYELDGR L
Sbjct: 117 EVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRAL 158



 Score = 71.2 bits (173), Expect(2) = 4e-27
 Identities = 34/49 (69%), Positives = 41/49 (83%)
 Frame = +1

Query: 238 NSFRAPRGGGRSFDNNNRLYVGNLSWDVDNVALESLFSEQGKVLDAKVV 384
           +SFR    GG SFD++NR+YVGNL+W VD  ALE+LFSEQGKV+DAKVV
Sbjct: 172 SSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVV 220


>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score = 78.6 bits (192), Expect(2) = 1e-26
 Identities = 38/42 (90%), Positives = 39/42 (92%)
 Frame = +3

Query: 3   EVIYDKITGRSRGFAFVTMSTVEEVEAAVQQFNGYELDGRPL 128
           EVIYDKITGRSRGF FVTMSTVEEVEAA QQFNGYEL+GR L
Sbjct: 120 EVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQL 161



 Score = 66.2 bits (160), Expect(2) = 1e-26
 Identities = 30/48 (62%), Positives = 41/48 (85%)
 Frame = +1

Query: 241 SFRAPRGGGRSFDNNNRLYVGNLSWDVDNVALESLFSEQGKVLDAKVV 384
           +FR PRGG  + ++ NR+YVGNLSW VD++ALE+LFSEQGKV +A+V+
Sbjct: 190 NFRGPRGGA-NLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVI 236