BLASTX nr result
ID: Angelica22_contig00000209
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00000209
(1217 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, p... 143 8e-32
gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora] 142 2e-31
dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense] 140 6e-31
ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [M... 140 6e-31
ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotei... 140 8e-31
>ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis] gi|223539286|gb|EEF40879.1| U1 small nuclear
ribonucleoprotein 70 kDa, putative [Ricinus communis]
Length = 506
Score = 143 bits (361), Expect = 8e-32
Identities = 72/97 (74%), Positives = 75/97 (77%)
Frame = -1
Query: 1217 VRLVADKEKNKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRX 1038
VRL+ DK NKPRGYAFIEYMHTRDMKAAYKQADGRKLD RRVLVDVERGRTVPNWRPR
Sbjct: 167 VRLITDKAANKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRR 226
Query: 1037 XXXXXXXXXXXXXXVNQRHSGREQNQSGGSRRSEEPK 927
VNQR+SGRE QSGGS RSEEP+
Sbjct: 227 LGGGLGTTRVGGEEVNQRNSGRELQQSGGSSRSEEPR 263
Score = 99.4 bits (246), Expect = 2e-18
Identities = 60/146 (41%), Positives = 83/146 (56%), Gaps = 17/146 (11%)
Frame = -1
Query: 683 RSRGRDHEVXXXXXXXXXXXXXXXXYERLDSKHERDRHGDREKSYGHLEPEDEPGWY-KP 507
R R RD+EV +R++SKHERDR +R+ Y H EPED+ GWY +P
Sbjct: 365 RDRERDYEVGDHDRGRSHDRESDY--DRVESKHERDRRAERD--YEHAEPEDDSGWYEQP 420
Query: 506 EQEHRRSEAENEILPYDYYEDRNGLGKYNNPSNEDIHDRY-QHSERDHDRYDQMDED--- 339
EQ HRR +AE++ YD+YE R+ G+++N HDRY Q+ + D DRYD++DED
Sbjct: 421 EQGHRRQDAEHD-QRYDHYEHRS-RGQFDNMDGHGDHDRYDQYPDHDRDRYDRIDEDDYH 478
Query: 338 ------------REYHRSDRSLSRDY 297
EY S+RS+SR+Y
Sbjct: 479 YDGGTSESREREHEYRHSERSVSREY 504
>gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
Length = 532
Score = 142 bits (358), Expect = 2e-31
Identities = 69/98 (70%), Positives = 77/98 (78%)
Frame = -1
Query: 1217 VRLVADKEKNKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRX 1038
VRLV DK NKPRGYAFIEY+HTRDMKAAYKQADG+K+DNRRVLVDVERGRTVPNWRPR
Sbjct: 184 VRLVTDKSTNKPRGYAFIEYVHTRDMKAAYKQADGKKIDNRRVLVDVERGRTVPNWRPRR 243
Query: 1037 XXXXXXXXXXXXXXVNQRHSGREQNQSGGSRRSEEPKV 924
+NQR+SGREQ Q GG+ RSEEP++
Sbjct: 244 LGGGLGTTRVGGEELNQRYSGREQVQPGGASRSEEPRM 281
Score = 115 bits (288), Expect = 2e-23
Identities = 61/143 (42%), Positives = 82/143 (57%), Gaps = 16/143 (11%)
Frame = -1
Query: 686 ERSRGRDHEVXXXXXXXXXXXXXXXXYERLDSKHERDRHGDREKSYGHLEPEDEPGWYKP 507
ER R RD+EV Y+++++KH+R+RHG+RE++Y H E ED+ GWY+
Sbjct: 383 ERDRDRDYEVGDADNDRGGSHDREYDYDKVEAKHDRERHGERERNYDHAEQEDDRGWYEQ 442
Query: 506 EQEHR-RSEAENEILPYDYYEDRNGLGKYNNPSNEDIHDRYQHSERDHDRYDQMDE---- 342
R R E E++ YDYY+ G G+Y+N + DRYQ S+R HDRYDQMDE
Sbjct: 443 SDRGRKRPEGEHDHGHYDYYDHYQGQGQYDNQGAQGDDDRYQDSDRYHDRYDQMDEDNYG 502
Query: 341 -----------DREYHRSDRSLS 306
DR+Y RSDRSLS
Sbjct: 503 YERTTSEPQEKDRDYQRSDRSLS 525
>dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
Length = 506
Score = 140 bits (353), Expect = 6e-31
Identities = 72/98 (73%), Positives = 76/98 (77%)
Frame = -1
Query: 1217 VRLVADKEKNKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRX 1038
VRLV D E NKPRGYAFIEY+HTRDMKAAYKQADGRK++ RRVLVDVERGRTVPNWRPR
Sbjct: 168 VRLVTDTESNKPRGYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRR 227
Query: 1037 XXXXXXXXXXXXXXVNQRHSGREQNQSGGSRRSEEPKV 924
VNQRHSGREQ QSG S RSEEP+V
Sbjct: 228 LGGGLGTTRVGGEEVNQRHSGREQQQSGPS-RSEEPRV 264
Score = 73.6 bits (179), Expect = 1e-10
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 14/117 (11%)
Frame = -1
Query: 605 ERLDSKHERDRHGDREKSYGHLEPEDEPGWY-KPEQEHRRSEAENEILPYDYYEDRNGLG 429
+ ++SKHE++ HG++E+ Y EP+D G Y +P R ++ E++ YD+YE + G G
Sbjct: 391 DHVESKHEKEPHGEKERDY---EPDDHRGRYNQPGHGKRHADTEHDPDRYDHYEHQRGRG 447
Query: 428 KYNNPSNEDIHDRY---------QHSER----DHDRYDQMDEDREYHRSDRSLSRDY 297
+Y+ + +++Y H+ER DR D+D +YHRS+RS SR+Y
Sbjct: 448 QYDEGDDHGDYNQYPDHDKMEDDHHTERPKSKSRDRDRNRDKDHDYHRSERSHSREY 504
>ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523491|gb|AET03945.1| U1 small nuclear
ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 502
Score = 140 bits (353), Expect = 6e-31
Identities = 72/98 (73%), Positives = 76/98 (77%)
Frame = -1
Query: 1217 VRLVADKEKNKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRX 1038
VRLV D E NKPRGYAFIEY+HTRDMKAAYKQADGRK++ RRVLVDVERGRTVPNWRPR
Sbjct: 164 VRLVTDAESNKPRGYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRR 223
Query: 1037 XXXXXXXXXXXXXXVNQRHSGREQNQSGGSRRSEEPKV 924
VNQRHSGREQ QSG S RSEEP+V
Sbjct: 224 LGGGLGTTRVGGDEVNQRHSGREQQQSGPS-RSEEPRV 260
Score = 74.7 bits (182), Expect = 4e-11
Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 14/144 (9%)
Frame = -1
Query: 686 ERSRGRDHEVXXXXXXXXXXXXXXXXYERLDSKHERDRHGDREKSYGHLEPEDEPGWYK- 510
E RGR H+ Y+ ++SKHE++ HG+ E+ Y EP+D G YK
Sbjct: 373 ETDRGRSHD-------------RGADYDHVESKHEKEPHGEIERDY---EPDDHHGRYKE 416
Query: 509 PEQEHRRSEAENEILPYDYYEDRNGLGKYNNPSNEDIHDRY---------QHSER----D 369
P HR ++ E++ Y++YE + G G+Y+ + +++Y H+ER
Sbjct: 417 PGHGHRHADPEHDPDHYNHYEHQRGRGQYDEGDDRGDYNQYPDHAKMEDDHHTERAKSKS 476
Query: 368 HDRYDQMDEDREYHRSDRSLSRDY 297
DR D+D +YHRS+RS SR+Y
Sbjct: 477 RDRDRNRDKDHDYHRSERSHSREY 500
>ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 140 bits (352), Expect = 8e-31
Identities = 72/98 (73%), Positives = 76/98 (77%)
Frame = -1
Query: 1217 VRLVADKEKNKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRX 1038
VRLVADK+ NKPRGYAFIEY+HTRDMKAAYKQADGRK+D RRVLVDVERGRTVPNWRPR
Sbjct: 170 VRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRR 229
Query: 1037 XXXXXXXXXXXXXXVNQRHSGREQNQSGGSRRSEEPKV 924
VNQRHSGREQ QS RSEEP+V
Sbjct: 230 LGGGLGTTRVGGEEVNQRHSGREQQQS----RSEEPRV 263