BLASTX nr result

ID: Angelica22_contig00000139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00000139
         (1002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   233   2e-78
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox...   229   1e-77
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun...   225   8e-76
dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   224   3e-74
dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   221   4e-74

>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Panax ginseng]
          Length = 183

 Score =  233 bits (593), Expect(2) = 2e-78
 Identities = 104/120 (86%), Positives = 112/120 (93%)
 Frame = +2

Query: 341 MKVWPPINMKKFETLSYLPPLTTEQLAKEVDYLLRSGWVPCLEFELEHGFVYREHNSSPG 520
           MKVWPP+ +KKFETLSYLP LT EQL+KEVDYLLRSGWVPCLEFELEHGFVYREH+ SPG
Sbjct: 59  MKVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPG 118

Query: 521 YYDGRYWVMWKLPMFGCTDSSQVLKELDECVKEYPQAYVRIIGFDNVRQVQCISFIAHQP 700
           YYDGRYW MWKLPMFGCTDSSQVLKE++EC KEYP AY+RIIGFDNVRQVQCISFIA +P
Sbjct: 119 YYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKP 178



 Score = 87.0 bits (214), Expect(2) = 2e-78
 Identities = 47/59 (79%), Positives = 51/59 (86%), Gaps = 2/59 (3%)
 Frame = +3

Query: 114 MASSMISS--VAPVTRASPAQASMVAPFTGLKSIASFPVTRKSEDITSITSNGGRVQCM 284
           MASS+ISS  VA V+RA PAQASMVAPFTGLKS A+FPVTRK  DITS+ SNGGRVQCM
Sbjct: 1   MASSVISSATVAAVSRAVPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCM 59


>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Aralia elata]
          Length = 183

 Score =  229 bits (584), Expect(2) = 1e-77
 Identities = 103/124 (83%), Positives = 114/124 (91%)
 Frame = +2

Query: 341 MKVWPPINMKKFETLSYLPPLTTEQLAKEVDYLLRSGWVPCLEFELEHGFVYREHNSSPG 520
           MKVWPP+ +KKFETLSYLPPLT E+LAKEVDYLLRSGWVPCLEFELEHG+VYRE++ SPG
Sbjct: 59  MKVWPPLGLKKFETLSYLPPLTNEELAKEVDYLLRSGWVPCLEFELEHGWVYRENHRSPG 118

Query: 521 YYDGRYWVMWKLPMFGCTDSSQVLKELDECVKEYPQAYVRIIGFDNVRQVQCISFIAHQP 700
           YYDGRYW MWKLPMFGCTDSSQVL E++EC KEYP A++RIIGFDNVRQVQCISFIA +P
Sbjct: 119 YYDGRYWTMWKLPMFGCTDSSQVLNEVEECKKEYPNAFIRIIGFDNVRQVQCISFIAFKP 178

Query: 701 E*IS 712
             IS
Sbjct: 179 PQIS 182



 Score = 88.2 bits (217), Expect(2) = 1e-77
 Identities = 47/59 (79%), Positives = 52/59 (88%), Gaps = 2/59 (3%)
 Frame = +3

Query: 114 MASSMISS--VAPVTRASPAQASMVAPFTGLKSIASFPVTRKSEDITSITSNGGRVQCM 284
           MASS+ISS  VA V+RA+PAQASMVAPFTGLKS A+FPVTRK  DITS+ SNGGRVQCM
Sbjct: 1   MASSVISSASVAAVSRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCM 59


>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus x
           domestica x Pyrus communis]
          Length = 179

 Score =  225 bits (574), Expect(2) = 8e-76
 Identities = 100/120 (83%), Positives = 111/120 (92%)
 Frame = +2

Query: 341 MKVWPPINMKKFETLSYLPPLTTEQLAKEVDYLLRSGWVPCLEFELEHGFVYREHNSSPG 520
           M+VWPP+ +KKFETLSYLPPL+TE LAKEVDYLLR  WVPCLEFELEHGFVYRE+N SPG
Sbjct: 57  MQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENNRSPG 116

Query: 521 YYDGRYWVMWKLPMFGCTDSSQVLKELDECVKEYPQAYVRIIGFDNVRQVQCISFIAHQP 700
           YYDGRYW MWKLPMFGCTDSSQVLKEL+E  K YPQ+++RIIGFDNVRQVQCISFIA++P
Sbjct: 117 YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKP 176



 Score = 85.9 bits (211), Expect(2) = 8e-76
 Identities = 44/57 (77%), Positives = 48/57 (84%)
 Frame = +3

Query: 114 MASSMISSVAPVTRASPAQASMVAPFTGLKSIASFPVTRKSEDITSITSNGGRVQCM 284
           MASSMISS    T ++PAQA MVAPFTGLKS ++FPVTRKS DITSI SNGGRVQCM
Sbjct: 1   MASSMISSGTVATVSAPAQARMVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQCM 57


>dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 179

 Score =  224 bits (572), Expect(2) = 3e-74
 Identities = 101/120 (84%), Positives = 110/120 (91%)
 Frame = +2

Query: 341 MKVWPPINMKKFETLSYLPPLTTEQLAKEVDYLLRSGWVPCLEFELEHGFVYREHNSSPG 520
           M+VWPPI  KKFETLSYLPPL+ E LAKEVDYLLRSGWVPCLEFELEHGFVYREH+SSPG
Sbjct: 57  MQVWPPIGKKKFETLSYLPPLSPESLAKEVDYLLRSGWVPCLEFELEHGFVYREHHSSPG 116

Query: 521 YYDGRYWVMWKLPMFGCTDSSQVLKELDECVKEYPQAYVRIIGFDNVRQVQCISFIAHQP 700
           YYDGRYW MWKLPMFGCTDS+QVLKEL+E  K YP A++RIIGFDN RQVQCISFIA++P
Sbjct: 117 YYDGRYWTMWKLPMFGCTDSAQVLKELEEAKKAYPTAFIRIIGFDNKRQVQCISFIAYKP 176



 Score = 81.3 bits (199), Expect(2) = 3e-74
 Identities = 42/59 (71%), Positives = 52/59 (88%), Gaps = 1/59 (1%)
 Frame = +3

Query: 111 LMASSMISSVAPVTRASPAQASMVAPFTGLKSIASFPVTRK-SEDITSITSNGGRVQCM 284
           + ++SM+SS  P  RA+PAQA+MVAPFTGLKS ++FPVTRK SEDITS++SNGGRVQCM
Sbjct: 1   MASASMLSS--PAVRATPAQATMVAPFTGLKSASAFPVTRKSSEDITSLSSNGGRVQCM 57


>dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 181

 Score =  221 bits (564), Expect(2) = 4e-74
 Identities = 99/120 (82%), Positives = 108/120 (90%)
 Frame = +2

Query: 341 MKVWPPINMKKFETLSYLPPLTTEQLAKEVDYLLRSGWVPCLEFELEHGFVYREHNSSPG 520
           M+VWPP+ +KKFETLSYLPPLT  QLAKE+DYLLRSGWVPCLEFE E GFVYREH+ SPG
Sbjct: 59  MQVWPPVGLKKFETLSYLPPLTPTQLAKEIDYLLRSGWVPCLEFETEKGFVYREHHHSPG 118

Query: 521 YYDGRYWVMWKLPMFGCTDSSQVLKELDECVKEYPQAYVRIIGFDNVRQVQCISFIAHQP 700
           YYDGRYW MWKLPMFGCTDS+QVLKEL+EC K YP A+VRIIGFDN RQVQCISFIA +P
Sbjct: 119 YYDGRYWTMWKLPMFGCTDSAQVLKELEECKKAYPTAFVRIIGFDNKRQVQCISFIAFKP 178



 Score = 84.0 bits (206), Expect(2) = 4e-74
 Identities = 44/59 (74%), Positives = 49/59 (83%), Gaps = 2/59 (3%)
 Frame = +3

Query: 114 MASSMISS--VAPVTRASPAQASMVAPFTGLKSIASFPVTRKSEDITSITSNGGRVQCM 284
           MASSM+SS  VA V   SP QA+MVAPFTGLKS ++FPVTRKS DITS+ SNGGRVQCM
Sbjct: 1   MASSMLSSAAVAAVKSTSPVQAAMVAPFTGLKSASAFPVTRKSNDITSLPSNGGRVQCM 59


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