BLASTX nr result
ID: Angelica22_contig00000126
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00000126
(1464 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI40014.3| unnamed protein product [Vitis vinifera] 241 3e-61
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-... 241 3e-61
emb|CAD20831.2| sigma factor [Spinacia oleracea] 233 1e-58
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ... 230 6e-58
ref|XP_002319746.1| predicted protein [Populus trichocarpa] gi|2... 229 1e-57
>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 241 bits (616), Expect = 3e-61
Identities = 168/420 (40%), Positives = 209/420 (49%), Gaps = 22/420 (5%)
Frame = -3
Query: 1195 CLLPQFKCLPHSFYINLSTHHHSSSQFYRFRHFSCFRRQRLATVKTVIEKASLGDYSQSV 1016
CLLPQFKC P +F + H S ++ + C ++
Sbjct: 3 CLLPQFKCPPDTFSTHPKLHILSKNREAIYFRVQC-----------------------AL 39
Query: 1015 SANRPWSVSASTSSPVLDLE------LESRSSSTVKNTPWTYSGAVGPPTEANFGATSTT 854
S P +S ST++ VLD+E LES S+S + PWTY G VGPPTEANF AT
Sbjct: 40 STTSP-PLSTSTTA-VLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLAR 97
Query: 853 EIRVSNEETIIXXXXXXXXXXXXXXXXXXXXXATMVNLHKLSKPFTDAESSLL--DRTQM 680
E +++EE +I A +V + +K T S L D +Q
Sbjct: 98 ETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQF 157
Query: 679 PQLR--ETDLLGALGELEKPEFDIXXXXXXXXXXXXXXXXXXXXQ-----------SIAV 539
+++ ET+ +G LG+ E + + SI V
Sbjct: 158 RRIQFTETERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVV 217
Query: 538 RSSRQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQEIDYSDPLRHLRGSTS-SKL 362
RS+RQ QE+DYSDPLR+LRG+TS S+L
Sbjct: 218 RSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRL 277
Query: 361 LTAREERELSRGIQVXXXXXXXXXXXXXXYGSEPSDMQWAAAAGIDQFTLRKNITDGKLC 182
LTA EE ELS GIQ +G +P+ QWAAAAG+DQ TLR+ G C
Sbjct: 278 LTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRC 337
Query: 181 KDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWI 2
KDKMIKSN+RLVISIAKNYQG GMN+QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWI
Sbjct: 338 KDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWI 397
>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
Length = 578
Score = 241 bits (615), Expect = 3e-61
Identities = 171/420 (40%), Positives = 211/420 (50%), Gaps = 22/420 (5%)
Frame = -3
Query: 1195 CLLPQFKCLPHSFYINLSTHHHSSSQFYRFRHFSCFRRQRLATVKTVIEKASLGDYSQSV 1016
CLLPQFKC P +F STH H C + + ++ A +
Sbjct: 3 CLLPQFKCPPDTF----STHPKL--------HILCKSPKNREAIYFRVQCA--------L 42
Query: 1015 SANRPWSVSASTSSPVLDLE------LESRSSSTVKNTPWTYSGAVGPPTEANFGATSTT 854
S P +S ST++ VLD+E LES S+S + PWTY G VGPPTEANF AT
Sbjct: 43 STTSP-PLSTSTTA-VLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLAR 100
Query: 853 EIRVSNEETIIXXXXXXXXXXXXXXXXXXXXXATMVNLHKLSKPFTDAESSLL--DRTQM 680
E +++EE +I A +V + +K T S L D +Q
Sbjct: 101 ETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQF 160
Query: 679 PQLR--ETDLLGALGELEKPEFDIXXXXXXXXXXXXXXXXXXXXQ-----------SIAV 539
+++ ET+ +G LG+ E + + SI V
Sbjct: 161 RRIQFTETERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVV 220
Query: 538 RSSRQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQEIDYSDPLRHLRGSTS-SKL 362
RS+RQ QE+DYSDPLR+LRG+TS S+L
Sbjct: 221 RSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRL 280
Query: 361 LTAREERELSRGIQVXXXXXXXXXXXXXXYGSEPSDMQWAAAAGIDQFTLRKNITDGKLC 182
LTA EE ELS GIQ +G +P+ QWAAAAG+DQ TLR+ G C
Sbjct: 281 LTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRC 340
Query: 181 KDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWI 2
KDKMIKSN+RLVISIAKNYQG GMN+QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWI
Sbjct: 341 KDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWI 400
>emb|CAD20831.2| sigma factor [Spinacia oleracea]
Length = 575
Score = 233 bits (593), Expect = 1e-58
Identities = 164/416 (39%), Positives = 199/416 (47%), Gaps = 18/416 (4%)
Frame = -3
Query: 1195 CLLPQFKCLPHSFYINLSTHHHSSSQ----FYRFRHFSCFRRQRLATVKTVIEKASLGDY 1028
CLLPQFKC P +F I+ H S+S R R CFR Q
Sbjct: 3 CLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQC---------------- 46
Query: 1027 SQSVSANRPWSVSASTSSPVLDLE------LESRSSSTVKNTPWTYSGAVGPPTEANFGA 866
+VS P + +A TS + D+E +ES S+S T+ +G P E F
Sbjct: 47 --AVSTPPPPTAAAETS--IFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDT 102
Query: 865 TSTTEIRVSNEETIIXXXXXXXXXXXXXXXXXXXXXATMVNLHKLSKPFTDAESSLLDRT 686
T ++ + NEE +I A M + +KP + E L +
Sbjct: 103 ALTAKLLIENEEAVIAAAAAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQSLHFS 162
Query: 685 QMPQLRETDLLGALGELEKPEFDIXXXXXXXXXXXXXXXXXXXXQ-------SIAVRSSR 527
QL E + +G++ E E + SI VRS+R
Sbjct: 163 GA-QLLENEQVGSMRNFEGSENSLREGDTVSEPADMEPTIEELQLLEVELDESITVRSTR 221
Query: 526 QPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQEIDYSDPLRHLRGST-SSKLLTAR 350
Q QE+DYSDPLR+LRG+T SS+LLT+
Sbjct: 222 QGERKARRARAAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSS 281
Query: 349 EERELSRGIQVXXXXXXXXXXXXXXYGSEPSDMQWAAAAGIDQFTLRKNITDGKLCKDKM 170
EE ELS GIQ +G PS +QWAAAAGIDQ TLR+ + G CKDKM
Sbjct: 282 EETELSAGIQDLLKLEKLHDELKVRFGKSPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKM 341
Query: 169 IKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWI 2
IKSNVRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWI
Sbjct: 342 IKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWI 397
>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
rpoD1, putative [Ricinus communis]
Length = 569
Score = 230 bits (587), Expect = 6e-58
Identities = 164/424 (38%), Positives = 201/424 (47%), Gaps = 26/424 (6%)
Frame = -3
Query: 1195 CLLPQFKCLPHSFYINLST---HHHSSSQFYRFRHFSCFRRQRLATVKTVIEKASLGDYS 1025
CLLPQFKC P +F I+ H + +Q + R +R Q + +
Sbjct: 4 CLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCILS-------------- 49
Query: 1024 QSVSANRPWSVSASTSSPVLDLE------LESRSSSTVKNTPWTYSGAVGPPTEANFGAT 863
+ S STS+ VLDLE E+ S S N+PWTY A FG+T
Sbjct: 50 ---------TTSPSTSTAVLDLEKLRLPSFEAPSDSIAPNSPWTY---------ATFGST 91
Query: 862 STTEIRVSNEETIIXXXXXXXXXXXXXXXXXXXXXATMVNLHKLSKPFTDAESSL----- 698
TE ++++E +I A +V + P + ES L
Sbjct: 92 LATETLITSDEAVIAAAAAEAVALARAAVKVAKDAALLVK----NFPSAETESKLTSPST 147
Query: 697 LDRTQMPQLRETDLLGALGELEKPEFDIXXXXXXXXXXXXXXXXXXXXQS---------- 548
+D ++ PQ ET+ +G+ E +
Sbjct: 148 IDASRWPQFTETERARIIGDSVATETGPREESSMQSSIKESDYLELTHKELELLQKQLSE 207
Query: 547 -IAVRSSRQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQEIDYSDPLRHLRGSTS 371
IAVRS RQ QE+DYSDPLR+LRG+TS
Sbjct: 208 GIAVRSRRQTERKARRARAVEKAASSVVSVKPGSTSKKKRGSLQEVDYSDPLRYLRGTTS 267
Query: 370 -SKLLTAREERELSRGIQVXXXXXXXXXXXXXXYGSEPSDMQWAAAAGIDQFTLRKNITD 194
S+LLTA EE ELS IQ YG +P+ QWAAAAG+DQ TLRK I
Sbjct: 268 TSRLLTASEELELSAAIQDLLKLERLQEELAERYGGQPTFAQWAAAAGVDQRTLRKRINH 327
Query: 193 GKLCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 14
G +CKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA
Sbjct: 328 GTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 387
Query: 13 HWWI 2
HWWI
Sbjct: 388 HWWI 391
>ref|XP_002319746.1| predicted protein [Populus trichocarpa] gi|222858122|gb|EEE95669.1|
predicted protein [Populus trichocarpa]
Length = 567
Score = 229 bits (584), Expect = 1e-57
Identities = 164/430 (38%), Positives = 194/430 (45%), Gaps = 32/430 (7%)
Frame = -3
Query: 1195 CLLPQFKCLPHSFYINL-STHHHSSSQFYRFRHFSCFRRQRLATVKTVIEKASLGDYSQS 1019
CLLPQFKC P +F ++ + HH ++ T + + L
Sbjct: 3 CLLPQFKCQPDTFSVHFRNLQHHGTNH-------------------TQLPQCVLS----- 38
Query: 1018 VSANRPWSVSASTSSPVLDLE------LESRSSSTVKNTPWTYSGAVGPPTEANFGATST 857
SAS S+ VLDLE LE S S N PWTY G +GP + FG +
Sbjct: 39 ---------SASPSTAVLDLEKLRLPSLEPHSDSISANRPWTYIGGIGPQKKPPFGTSLA 89
Query: 856 TEIRVSNEETIIXXXXXXXXXXXXXXXXXXXXXATMVNLHKLSKPFTDAESSLLDRTQMP 677
E ++N+E +I V + K + SS+ T++P
Sbjct: 90 AETLIANDEAVIAAAAAEAVALAR----------AAVKVAKDAAEMAKNYSSMKKETKIP 139
Query: 676 QLRETDLLGALGEL--EKPEFDIXXXXXXXXXXXXXXXXXXXXQS--------------- 548
TD ++ L EK DI
Sbjct: 140 IASTTDSFSSMWSLLTEKERADIIGDSVSAETRLREEYSVQYPTEEYDCLEPTQEELALL 199
Query: 547 -------IAVRSSRQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQEIDYSDPLRH 389
IAVRS RQ QE+D SDPLR
Sbjct: 200 QKQLSEGIAVRSKRQTERKARRARAAEKAAANVVSVKSGSTSKKKRVPLQEVDQSDPLRF 259
Query: 388 LRG-STSSKLLTAREERELSRGIQVXXXXXXXXXXXXXXYGSEPSDMQWAAAAGIDQFTL 212
RG S+SS+LL+A EE ELS GIQ +G EPS QWAAAAG+DQ TL
Sbjct: 260 FRGASSSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGEPSFAQWAAAAGVDQLTL 319
Query: 211 RKNITDGKLCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGF 32
RK + G LCKDKMIKSNVRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKGF
Sbjct: 320 RKRLNYGILCKDKMIKSNVRLVISIAKNYQGTGMNLQDLVQEGCRGLVRGAEKFDASKGF 379
Query: 31 KFSTYAHWWI 2
KFSTYAHWWI
Sbjct: 380 KFSTYAHWWI 389