BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00000081
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   273   5e-71
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox...   266   4e-69
ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chai...   262   1e-67
dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   260   3e-67
gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   260   4e-67

>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Panax ginseng]
          Length = 183

 Score =  273 bits (698), Expect = 5e-71
 Identities = 136/179 (75%), Positives = 149/179 (83%), Gaps = 2/179 (1%)
 Frame = -3

Query: 876 MASSMISS--VAPVTRATPAQASMVAPFTGLKSAVAFPVTRKLENDITSITSNGGRVQCM 703
           MASS+ISS  VA V+RA PAQASMVAPFTGLKS  AFPVTRK+ NDITS+ SNGGRVQCM
Sbjct: 1   MASSVISSATVAAVSRAVPAQASMVAPFTGLKSTAAFPVTRKV-NDITSLPSNGGRVQCM 59

Query: 702 KVWPPINMKKFEXXXXXXXXXTEQLAKEVDYLLRSGWVPCLEFELEHGFVYREHNKSPGX 523
           KVWPP+ +KKFE          EQL+KEVDYLLRSGWVPCLEFELEHGFVYREH+ SPG 
Sbjct: 60  KVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGY 119

Query: 522 XXXXXXVMWKLPMFGCTDSSQVLKELDECVKEYPSAYVRIIGFDNVRQVQCISFIAHQP 346
                  MWKLPMFGCTDSSQVLKE++EC KEYP+AY+RIIGFDNVRQVQCISFIA +P
Sbjct: 120 YDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKP 178


>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Aralia elata]
          Length = 183

 Score =  266 bits (681), Expect = 4e-69
 Identities = 132/179 (73%), Positives = 149/179 (83%), Gaps = 2/179 (1%)
 Frame = -3

Query: 876 MASSMISS--VAPVTRATPAQASMVAPFTGLKSAVAFPVTRKLENDITSITSNGGRVQCM 703
           MASS+ISS  VA V+RA PAQASMVAPFTGLKS  AFPVTRK+ NDITS+ SNGGRVQCM
Sbjct: 1   MASSVISSASVAAVSRAAPAQASMVAPFTGLKSTAAFPVTRKV-NDITSLPSNGGRVQCM 59

Query: 702 KVWPPINMKKFEXXXXXXXXXTEQLAKEVDYLLRSGWVPCLEFELEHGFVYREHNKSPGX 523
           KVWPP+ +KKFE          E+LAKEVDYLLRSGWVPCLEFELEHG+VYRE+++SPG 
Sbjct: 60  KVWPPLGLKKFETLSYLPPLTNEELAKEVDYLLRSGWVPCLEFELEHGWVYRENHRSPGY 119

Query: 522 XXXXXXVMWKLPMFGCTDSSQVLKELDECVKEYPSAYVRIIGFDNVRQVQCISFIAHQP 346
                  MWKLPMFGCTDSSQVL E++EC KEYP+A++RIIGFDNVRQVQCISFIA +P
Sbjct: 120 YDGRYWTMWKLPMFGCTDSSQVLNEVEECKKEYPNAFIRIIGFDNVRQVQCISFIAFKP 178


>ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chain 1B, chloroplast
           precursor, putative [Ricinus communis]
           gi|223539597|gb|EEF41184.1| Ribulose bisphosphate
           carboxylase small chain 1B, chloroplast precursor,
           putative [Ricinus communis]
          Length = 181

 Score =  262 bits (669), Expect = 1e-67
 Identities = 127/177 (71%), Positives = 146/177 (82%)
 Frame = -3

Query: 876 MASSMISSVAPVTRATPAQASMVAPFTGLKSAVAFPVTRKLENDITSITSNGGRVQCMKV 697
           MASSMISS A V+R++PAQA+MVAPFTGLKSA +FPVTRK  NDITSI SNGGRVQCM+V
Sbjct: 1   MASSMISS-ASVSRSSPAQATMVAPFTGLKSAASFPVTRKANNDITSIASNGGRVQCMQV 59

Query: 696 WPPINMKKFEXXXXXXXXXTEQLAKEVDYLLRSGWVPCLEFELEHGFVYREHNKSPGXXX 517
           WPP+  KKFE          EQLAKEVDYLLR GW+PCLEFELEHGFVYRE+++SPG   
Sbjct: 60  WPPLGKKKFETLSYLPDLTDEQLAKEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYYD 119

Query: 516 XXXXVMWKLPMFGCTDSSQVLKELDECVKEYPSAYVRIIGFDNVRQVQCISFIAHQP 346
                MWKLPMFGC+DS+QVLKELDE  K YP++++RIIGFDN RQVQCISFIA++P
Sbjct: 120 GRYWTMWKLPMFGCSDSTQVLKELDEAKKAYPNSFIRIIGFDNRRQVQCISFIAYKP 176


>dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 179

 Score =  260 bits (665), Expect = 3e-67
 Identities = 127/176 (72%), Positives = 142/176 (80%)
 Frame = -3

Query: 873 ASSMISSVAPVTRATPAQASMVAPFTGLKSAVAFPVTRKLENDITSITSNGGRVQCMKVW 694
           ++SM+SS  P  RATPAQA+MVAPFTGLKSA AFPVTRK   DITS++SNGGRVQCM+VW
Sbjct: 3   SASMLSS--PAVRATPAQATMVAPFTGLKSASAFPVTRKSSEDITSLSSNGGRVQCMQVW 60

Query: 693 PPINMKKFEXXXXXXXXXTEQLAKEVDYLLRSGWVPCLEFELEHGFVYREHNKSPGXXXX 514
           PPI  KKFE          E LAKEVDYLLRSGWVPCLEFELEHGFVYREH+ SPG    
Sbjct: 61  PPIGKKKFETLSYLPPLSPESLAKEVDYLLRSGWVPCLEFELEHGFVYREHHSSPGYYDG 120

Query: 513 XXXVMWKLPMFGCTDSSQVLKELDECVKEYPSAYVRIIGFDNVRQVQCISFIAHQP 346
               MWKLPMFGCTDS+QVLKEL+E  K YP+A++RIIGFDN RQVQCISFIA++P
Sbjct: 121 RYWTMWKLPMFGCTDSAQVLKELEEAKKAYPTAFIRIIGFDNKRQVQCISFIAYKP 176


>gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 1A
           [Corchorus olitorius]
          Length = 183

 Score =  260 bits (664), Expect = 4e-67
 Identities = 126/177 (71%), Positives = 140/177 (79%)
 Frame = -3

Query: 876 MASSMISSVAPVTRATPAQASMVAPFTGLKSAVAFPVTRKLENDITSITSNGGRVQCMKV 697
           MAS+M+SS   V RA+PAQA++VAPFTGLKSA AFP TRK   DITSI SNGGRVQCM+V
Sbjct: 1   MASAMMSSATVVNRASPAQATLVAPFTGLKSASAFPTTRKNNRDITSIASNGGRVQCMQV 60

Query: 696 WPPINMKKFEXXXXXXXXXTEQLAKEVDYLLRSGWVPCLEFELEHGFVYREHNKSPGXXX 517
           WPP+  KKFE           QLAKEVDYLLRSGW+PCLEFELEHGFVYREH+ SPG   
Sbjct: 61  WPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSGWIPCLEFELEHGFVYREHHHSPGYYD 120

Query: 516 XXXXVMWKLPMFGCTDSSQVLKELDECVKEYPSAYVRIIGFDNVRQVQCISFIAHQP 346
                MWKLPMFGCTDSSQVLKEL+E  K YP A++RIIGFDN RQVQCISFIA++P
Sbjct: 121 GRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPDAFIRIIGFDNRRQVQCISFIAYKP 177