BLASTX nr result

ID: Anemarrhena21_contig00071816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00071816
         (274 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63171.1| hypothetical protein 20.t00023 [Asparagus officin...    72   2e-10
gb|ABD63154.1| hypothetical protein 20.t00006 [Asparagus officin...    67   6e-09
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]     59   2e-06
gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]     59   2e-06

>gb|ABD63171.1| hypothetical protein 20.t00023 [Asparagus officinalis]
          Length = 403

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
 Frame = +2

Query: 8   FGSNSPKV-VQHGFLLVPETTLNILRRSAEEKTKKGLTPVTLESGEVMWIHPDILEDPQW 184
           FG++ P+V    G + +P+  L I       + +KGL   TL SG+VMW+HPD+L D QW
Sbjct: 144 FGTDLPEVHAPTGVVPIPKAVLKITNADPHNQREKGLVSQTLPSGQVMWVHPDLLSDKQW 203

Query: 185 DSKKRGKKKS--CNVISLVVDDDATPTNAISD 274
            SK  GK K    NVIS + D D      ++D
Sbjct: 204 TSKSSGKPKGKPYNVISAIPDGDKAEMTTLTD 235


>gb|ABD63154.1| hypothetical protein 20.t00006 [Asparagus officinalis]
          Length = 851

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
 Frame = +2

Query: 5   QFGSNSPKVVQHGFLLVPETTLNILRRSAEEKTKKGLTPVTLESGEVMWIHPDILEDPQW 184
           QFG   P V  +G + + +  +++       +  +GL P+T + GE+MW+HPD+L D QW
Sbjct: 703 QFGDFPPVVTANGVIPIRKGEMHLKNVDPHSQKDRGLVPLTTQKGEIMWVHPDLLRDQQW 762

Query: 185 DS----KKRGKKKSCNVISLVVDDDATPTNAISD 274
            S    KK GK KS N+IS  + ++      ++D
Sbjct: 763 TSTSSKKKGGKAKSSNMISPSITENDDHLKPLTD 796


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
 Frame = +2

Query: 5    QFGSNSPKVVQHGFLLVPETTLNILRRSAEEKTKKGLTPVTLESGEVMWIHPDILEDPQW 184
            QFG   P     G + V +  +++       +  +GL P+T+  GE+MW+HPD++ED QW
Sbjct: 1716 QFGDFPPVAAADGVIPVRKGEMHLKNTDLHNQKDRGLVPLTISKGEIMWVHPDLVEDQQW 1775

Query: 185  D---SKKRGKK 208
                SKK+G K
Sbjct: 1776 TNTWSKKKGGK 1786


>gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 926

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
 Frame = +2

Query: 5    QFGSNSPKVVQHGFLLVPETTLNILRRSAEEKTKKGLTPVTLESGEVMWIHPDILEDPQW 184
            QFG   P     G + V +  +++       +  +GL P+T+  GE+MW+HPD++ED QW
Sbjct: 854  QFGDFPPVAAADGVIPVRKGEMHLKNTDLHNQKDRGLVPLTISKGEIMWVHPDLVEDQQW 913

Query: 185  D---SKKRGKK 208
                SKK+G K
Sbjct: 914  TNTWSKKKGGK 924


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