BLASTX nr result
ID: Anemarrhena21_contig00069327
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00069327
(632 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACJ03572.1| RNA-dependent RNA polymerase [Carrot mottle mimic... 205 2e-50
ref|NP_054006.2| RNA-dependent RNA polymerase [Carrot mottle mim... 205 2e-50
gb|AAB81639.1| RNA-dependent RNA polymerase, partial [Carrot mot... 205 2e-50
gb|ACJ03575.1| RNA-dependent RNA polymerase [Carrot mottle mimic... 201 3e-49
ref|YP_002302259.1| RNA-dependent RNA polymerase [Carrot mottle ... 197 5e-48
gb|AAG02571.1| RNA-dependent RNA polymerase, partial [Tobacco mo... 191 3e-46
gb|AKQ00676.1| RNA-dependent RNA polymerase [Tobacco bushy top v... 187 4e-45
ref|NP_620846.2| replicase [Pea enation mosaic virus-2] 186 7e-45
gb|AAA52184.1| 65kDa viral replicase, partial [Pea enation mosai... 186 7e-45
gb|AEM45994.1| RNA-dependent RNA-polymerase [Pea enation mosaic ... 186 9e-45
gb|AEM45990.1| RNA-dependent RNA-polymerase [Pea enation mosaic ... 186 9e-45
ref|YP_009056849.1| RNA-dependent RNA polymerase [Ethiopian toba... 185 1e-44
ref|NP_619714.1| RNA-dependent RNA polymerase [Groundnut rosette... 185 1e-44
sp|Q67683.2|RDRP_GRVMC RecName: Full=RNA-directed RNA polymerase... 185 1e-44
gb|AAU20330.1| RNA-dependent RNA-polymerase [Pea enation mosaic ... 185 2e-44
gb|AKQ00678.1| RNA-dependent RNA polymerase [Tobacco bushy top v... 184 2e-44
gb|AKQ00677.1| RNA-dependent RNA polymerase [Tobacco bushy top v... 184 2e-44
ref|NP_733848.2| RNA-dependent RNA polymerase [Tobacco bushy top... 184 2e-44
emb|CAX62133.1| RNA-dependent RNA polymerase [Tobacco bushy top ... 184 2e-44
emb|CBH71321.1| hypothetical protein [Tobacco bushy top virus] 184 2e-44
>gb|ACJ03572.1| RNA-dependent RNA polymerase [Carrot mottle mimic virus]
Length = 882
Score = 205 bits (521), Expect = 2e-50
Identities = 102/204 (50%), Positives = 133/204 (65%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS EALK+TH Y++FN ++FV L++M N+G T KDG KY
Sbjct: 559 PVCVGLDASRFDQHVSVEALKFTHSVYKRFNSSKEFVDLLNQMYVNRGLGTCKDGLVKYK 618
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V RMSGDMDTALGNC+LMV M + C + I HE++DNGDD V+ E R + +
Sbjct: 619 VKGCRMSGDMDTALGNCVLMVLMTRNLCLDLSIPHELMDNGDDCIVIFEKEHLQRFNAAV 678
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
+FA LGF MKVEA EK+EFCQT PVFDG++WRMVR + + KD + D E+
Sbjct: 679 KPYFAALGFTMKVEAPVYQFEKVEFCQTQPVFDGTQWRMVRQIPSIAKDLCSVIDWEQLE 738
Query: 92 YRIGEVSECGKALCDGLPIYSTFY 21
+ CG++L GLP++ +FY
Sbjct: 739 SWWHAIGNCGQSLAGGLPVFGSFY 762
>ref|NP_054006.2| RNA-dependent RNA polymerase [Carrot mottle mimic virus]
Length = 882
Score = 205 bits (521), Expect = 2e-50
Identities = 102/204 (50%), Positives = 133/204 (65%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS EALK+TH Y++FN ++FV L++M N+G T KDG KY
Sbjct: 559 PVCVGLDASRFDQHVSVEALKFTHSVYKRFNSSKEFVDLLNQMYVNRGLGTCKDGLVKYK 618
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V RMSGDMDTALGNC+LMV M + C + I HE++DNGDD V+ E R + +
Sbjct: 619 VKGCRMSGDMDTALGNCVLMVLMTRNLCLDLSIPHELMDNGDDCIVIFEKEHLQRFNAAV 678
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
+FA LGF MKVEA EK+EFCQT PVFDG++WRMVR + + KD + D E+
Sbjct: 679 KPYFAALGFTMKVEAPVYQFEKVEFCQTQPVFDGTQWRMVRQIPSIAKDLCSVIDWEQLE 738
Query: 92 YRIGEVSECGKALCDGLPIYSTFY 21
+ CG++L GLP++ +FY
Sbjct: 739 SWWHAIGNCGQSLAGGLPVFGSFY 762
>gb|AAB81639.1| RNA-dependent RNA polymerase, partial [Carrot mottle mimic virus]
Length = 569
Score = 205 bits (521), Expect = 2e-50
Identities = 102/204 (50%), Positives = 133/204 (65%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS EALK+TH Y++FN ++FV L++M N+G T KDG KY
Sbjct: 246 PVCVGLDASRFDQHVSVEALKFTHSVYKRFNSSKEFVDLLNQMYVNRGLGTCKDGLVKYK 305
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V RMSGDMDTALGNC+LMV M + C + I HE++DNGDD V+ E R + +
Sbjct: 306 VKGCRMSGDMDTALGNCVLMVLMTRNLCLDLSIPHELMDNGDDCIVIFEKEHLQRFNAAV 365
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
+FA LGF MKVEA EK+EFCQT PVFDG++WRMVR + + KD + D E+
Sbjct: 366 KPYFAALGFTMKVEAPVYQFEKVEFCQTQPVFDGTQWRMVRQIPSIAKDLCSVIDWEQLE 425
Query: 92 YRIGEVSECGKALCDGLPIYSTFY 21
+ CG++L GLP++ +FY
Sbjct: 426 SWWHAIGNCGQSLAGGLPVFGSFY 449
>gb|ACJ03575.1| RNA-dependent RNA polymerase [Carrot mottle mimic virus]
Length = 880
Score = 201 bits (511), Expect = 3e-49
Identities = 100/204 (49%), Positives = 132/204 (64%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS EALK+TH Y++FN ++FV LD+M N+G T KDG KY
Sbjct: 559 PVCVGLDASRFDQHVSVEALKFTHSVYKRFNSSKEFVELLDQMYVNRGLGTCKDGLVKYK 618
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V RMSGDMDTALGNC+LMV M + C + I HE++DNGDD V+ E + + +
Sbjct: 619 VKGCRMSGDMDTALGNCVLMVLMTRNLCLDLSIPHELMDNGDDCIVMFEKEHLQKFNAAV 678
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
+FA LGF MKVEA EK+EFCQT PVFDG++WRMVR + + KD + + E+
Sbjct: 679 KPYFAALGFTMKVEAPVYQFEKVEFCQTQPVFDGTQWRMVRQIPSIAKDLCSVINWEQLE 738
Query: 92 YRIGEVSECGKALCDGLPIYSTFY 21
+ CG++L G+P+ +FY
Sbjct: 739 SWWHAIGNCGQSLAGGMPVLGSFY 762
>ref|YP_002302259.1| RNA-dependent RNA polymerase [Carrot mottle virus]
gi|209972132|gb|ACJ03580.1| RNA-dependent RNA polymerase
[Carrot mottle virus]
Length = 870
Score = 197 bits (500), Expect = 5e-48
Identities = 101/204 (49%), Positives = 127/204 (62%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS ALK+THK Y++F D +F L M NKG TAKDG KY
Sbjct: 540 PVCVGLDASRFDQHVSVAALKFTHKVYKRFVRDPEFDRLLQLMYTNKGRGTAKDGVVKYK 599
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V RMSGDMDTALGNC+LMV M C I HE++DNGDD V+ E + +
Sbjct: 600 VKGCRMSGDMDTALGNCVLMVPMTRELCKRLEIPHELMDNGDDCIVIFDKEHLSKFQRAV 659
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
+F +LGF MKVEA LE++EFCQT PVFDG++WRMVR ++ + KD + E+
Sbjct: 660 KPYFKDLGFSMKVEAPVFKLEQIEFCQTQPVFDGTQWRMVRQVNSIAKDLCSVISWEQLL 719
Query: 92 YRIGEVSECGKALCDGLPIYSTFY 21
Y + CG AL G+P+ +FY
Sbjct: 720 YWWDAIGTCGLALAGGIPVLHSFY 743
>gb|AAG02571.1| RNA-dependent RNA polymerase, partial [Tobacco mottle virus]
Length = 361
Score = 191 bits (485), Expect = 3e-46
Identities = 96/204 (47%), Positives = 128/204 (62%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDA RFDQH+S ALK+TH YRKF + +F LD+ML N G TAKDG KY
Sbjct: 30 PVCVGLDAKRFDQHISMPALKFTHGIYRKFIKNAEFSNLLDKMLINHGVGTAKDGRVKYK 89
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V RMSGDMDTALGNC +MV M + C + I HE+++NGDD V+ + S +
Sbjct: 90 VRGCRMSGDMDTALGNCTIMVLMTRNLCLKLNIPHELMNNGDDCIVMFDQQYLQVFNSAV 149
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
+F LGF +KVE LE++EFCQT+PV+DG +WRMVR L+ + KD + + E+
Sbjct: 150 KPYFKSLGFNIKVEEPRYTLERVEFCQTHPVYDGEKWRMVRLLTAIAKDCATVINWEQLT 209
Query: 92 YRIGEVSECGKALCDGLPIYSTFY 21
+ +CG A+ G+PIY+ FY
Sbjct: 210 AWWAAIGKCGLAVLSGMPIYTNFY 233
>gb|AKQ00676.1| RNA-dependent RNA polymerase [Tobacco bushy top virus]
Length = 865
Score = 187 bits (475), Expect = 4e-45
Identities = 95/203 (46%), Positives = 125/203 (61%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS +AL++TH Y++F + L M N +AKDG KY
Sbjct: 532 PVCVGLDASRFDQHVSCDALRFTHSVYKRFVKGREVNKLLSWMYKNHALGSAKDGFVKYE 591
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V+ RMSGDMDTALGNC+LMV M C I HE+++NGDD V+ + +
Sbjct: 592 VEGCRMSGDMDTALGNCVLMVLMTRQLCKNLSIPHELMNNGDDCIVIFDRQYLSTFQDAV 651
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
WF ELGF MKVE LE+++FCQT PVFDG +WRMVR +S +VKD + D E+ P
Sbjct: 652 EPWFRELGFTMKVEEPVYHLERVDFCQTRPVFDGKKWRMVRHISSIVKDCCSVIDWEQLP 711
Query: 92 YRIGEVSECGKALCDGLPIYSTF 24
+ ECG A+ G+PI+++F
Sbjct: 712 AWWNAIGECGIAVAGGIPIHNSF 734
>ref|NP_620846.2| replicase [Pea enation mosaic virus-2]
Length = 846
Score = 186 bits (473), Expect = 7e-45
Identities = 93/204 (45%), Positives = 130/204 (63%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS EAL++TH YR F +F L M N+G +AKDG +Y
Sbjct: 517 PVVVGLDASRFDQHVSVEALQFTHAVYRGFIKSREFNNLLQMMYTNRGLGSAKDGFVRYK 576
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V RMSGDMDT+LGNC+LMV + + C GI HE+ +NGDD V ++ + +
Sbjct: 577 VKGRRMSGDMDTSLGNCVLMVLLTRNLCKVLGIPHELFNNGDDCIVFFDRCHLEKFNNAV 636
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
+FA+LGF+MKVE +VLEK+EFCQT P++DG +WR VR +S + KD + ++
Sbjct: 637 KTYFADLGFKMKVEPPVDVLEKIEFCQTQPIYDGEKWRTVRCISSIGKDCSSVISWDQLE 696
Query: 92 YRIGEVSECGKALCDGLPIYSTFY 21
+++ G A+C G+PIY++FY
Sbjct: 697 GWWNAIAQSGLAVCGGMPIYTSFY 720
>gb|AAA52184.1| 65kDa viral replicase, partial [Pea enation mosaic virus-2]
Length = 581
Score = 186 bits (473), Expect = 7e-45
Identities = 93/204 (45%), Positives = 130/204 (63%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS EAL++TH YR F +F L M N+G +AKDG +Y
Sbjct: 252 PVVVGLDASRFDQHVSVEALQFTHAVYRGFIKSREFNNLLQMMYTNRGLGSAKDGFVRYK 311
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V RMSGDMDT+LGNC+LMV + + C GI HE+ +NGDD V ++ + +
Sbjct: 312 VKGRRMSGDMDTSLGNCVLMVLLTRNLCKVLGIPHELFNNGDDCIVFFDRCHLEKFNNAV 371
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
+FA+LGF+MKVE +VLEK+EFCQT P++DG +WR VR +S + KD + ++
Sbjct: 372 KTYFADLGFKMKVEPPVDVLEKIEFCQTQPIYDGEKWRTVRCISSIGKDCSSVISWDQLE 431
Query: 92 YRIGEVSECGKALCDGLPIYSTFY 21
+++ G A+C G+PIY++FY
Sbjct: 432 GWWNAIAQSGLAVCGGMPIYTSFY 455
>gb|AEM45994.1| RNA-dependent RNA-polymerase [Pea enation mosaic virus-2]
Length = 849
Score = 186 bits (472), Expect = 9e-45
Identities = 93/204 (45%), Positives = 130/204 (63%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS EAL++TH YR F +F L M N+G +AKDG +Y
Sbjct: 520 PVVVGLDASRFDQHVSVEALQFTHAVYRGFIKSREFNNLLQMMYTNRGLGSAKDGFVRYK 579
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V RMSGDMDT+LGNC+LMV + + C GI HE+ +NGDD V ++ + +
Sbjct: 580 VKGRRMSGDMDTSLGNCVLMVLLTRNLCKILGIPHELFNNGDDCIVFFDRCHLEKFNNAV 639
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
+FA+LGF+MKVE +VLEK+EFCQT P++DG +WR VR +S + KD + ++
Sbjct: 640 KPYFADLGFKMKVEPPVDVLEKIEFCQTQPIYDGEKWRTVRCISSIGKDCSSVISWDQLE 699
Query: 92 YRIGEVSECGKALCDGLPIYSTFY 21
+++ G A+C G+PIY++FY
Sbjct: 700 GWWNAIAQSGLAVCGGMPIYTSFY 723
>gb|AEM45990.1| RNA-dependent RNA-polymerase [Pea enation mosaic virus-2]
Length = 846
Score = 186 bits (472), Expect = 9e-45
Identities = 93/204 (45%), Positives = 130/204 (63%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS EAL++TH YR F +F L M N+G +AKDG +Y
Sbjct: 517 PVVVGLDASRFDQHVSVEALQFTHAVYRGFIKSREFNNLLQMMYTNRGLGSAKDGFVRYK 576
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V RMSGDMDT+LGNC+LMV + + C GI HE+ +NGDD V ++ + +
Sbjct: 577 VKGRRMSGDMDTSLGNCVLMVLLTRNLCKILGIPHELFNNGDDCIVFFDRCHLEKFNNAV 636
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
+FA+LGF+MKVE +VLEK+EFCQT P++DG +WR VR +S + KD + ++
Sbjct: 637 KTYFADLGFKMKVEPPVDVLEKIEFCQTQPIYDGEKWRTVRCISSIGKDCSSVISWDQLE 696
Query: 92 YRIGEVSECGKALCDGLPIYSTFY 21
+++ G A+C G+PIY++FY
Sbjct: 697 GWWNAIAQSGLAVCGGMPIYTSFY 720
>ref|YP_009056849.1| RNA-dependent RNA polymerase [Ethiopian tobacco bushy top virus]
gi|674660243|gb|AIL27641.1| RNA-dependent RNA polymerase
[Ethiopian tobacco bushy top virus]
Length = 845
Score = 185 bits (470), Expect = 1e-44
Identities = 95/203 (46%), Positives = 127/203 (62%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS +AL++TH YRKF + +F L M N +KDG KYT
Sbjct: 510 PVCVGLDASRFDQHVSVDALRFTHGVYRKFVKNPEFDKLLRWMYTNHCRGASKDGFVKYT 569
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V RMSGDMDTALGNC+LMV M I HE++DNGDD V+ E D+ +
Sbjct: 570 VRGCRMSGDMDTALGNCVLMVLMTRHLLQSLSIPHELLDNGDDCIVIMDREHLDKFNLAV 629
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
+++ LGF MKVE LE+++FCQT PVFDG +WRMVR +S + KD + + E+ P
Sbjct: 630 KPYYSNLGFTMKVEXPVYSLERVDFCQTRPVFDGKKWRMVRHISSIAKDCCTVINWEQLP 689
Query: 92 YRIGEVSECGKALCDGLPIYSTF 24
+ + ECG A+ G+PI+++F
Sbjct: 690 AWLTAIGECGLAVAGGIPIHNSF 712
>ref|NP_619714.1| RNA-dependent RNA polymerase [Groundnut rosette virus]
Length = 839
Score = 185 bits (470), Expect = 1e-44
Identities = 92/203 (45%), Positives = 128/203 (63%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS +AL++TH YR+F +F L M N+ AKDG KYT
Sbjct: 504 PVCVGLDASRFDQHVSVDALRFTHGVYRRFVKSSEFDKLLRWMYTNRCRGAAKDGFVKYT 563
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V+ RMSGDMDTALGNC+LMV M GI HE++DNGDD V+ E + +
Sbjct: 564 VNGCRMSGDMDTALGNCVLMVLMTRHLLMSLGIPHELLDNGDDCIVIMDQEHLAKFNDAV 623
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
+++ LGF MKVE LE+++FCQT PV+DG +WRMVR ++ + KD + + E+ P
Sbjct: 624 KPYYSNLGFTMKVEEPVYSLERVDFCQTRPVYDGKKWRMVRHITSVAKDCCTVINWEQLP 683
Query: 92 YRIGEVSECGKALCDGLPIYSTF 24
+ + ECG A+ G+P++++F
Sbjct: 684 SWLSAIGECGIAVAGGIPVHNSF 706
>sp|Q67683.2|RDRP_GRVMC RecName: Full=RNA-directed RNA polymerase; Short=RdRp
Length = 839
Score = 185 bits (470), Expect = 1e-44
Identities = 92/203 (45%), Positives = 128/203 (63%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS +AL++TH YR+F +F L M N+ AKDG KYT
Sbjct: 504 PVCVGLDASRFDQHVSVDALRFTHGVYRRFVKSSEFDKLLRWMYTNRCRGAAKDGFVKYT 563
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V+ RMSGDMDTALGNC+LMV M GI HE++DNGDD V+ E + +
Sbjct: 564 VNGCRMSGDMDTALGNCVLMVLMTRHLLMSLGIPHELLDNGDDCIVIMDQEHLAKFNDAV 623
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
+++ LGF MKVE LE+++FCQT PV+DG +WRMVR ++ + KD + + E+ P
Sbjct: 624 KPYYSNLGFTMKVEEPVYSLERVDFCQTRPVYDGKKWRMVRHITSVAKDCCTVINWEQLP 683
Query: 92 YRIGEVSECGKALCDGLPIYSTF 24
+ + ECG A+ G+P++++F
Sbjct: 684 SWLSAIGECGIAVAGGIPVHNSF 706
>gb|AAU20330.1| RNA-dependent RNA-polymerase [Pea enation mosaic virus-2]
Length = 846
Score = 185 bits (469), Expect = 2e-44
Identities = 92/204 (45%), Positives = 129/204 (63%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS EAL++TH YR F +F L M N+G + KDG +Y
Sbjct: 517 PVVVGLDASRFDQHVSVEALQFTHAVYRGFIKSREFNNLLQMMYTNRGLGSTKDGFVRYK 576
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V RMSGDMDT+LGNC+LMV + + C GI HE+ +NGDD V ++ + +
Sbjct: 577 VKGRRMSGDMDTSLGNCVLMVLLTRNLCKVLGIPHELFNNGDDCIVFFDRCHLEKFNNAV 636
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
+FA+LGF+MKVE +VLEK+EFCQT P++DG +WR VR +S + KD + ++
Sbjct: 637 KPYFADLGFKMKVEPPVDVLEKIEFCQTQPIYDGEKWRTVRCISSIGKDCSSVISWDQLE 696
Query: 92 YRIGEVSECGKALCDGLPIYSTFY 21
+++ G A+C G+PIY++FY
Sbjct: 697 GWWNAIAQSGLAVCGGMPIYTSFY 720
>gb|AKQ00678.1| RNA-dependent RNA polymerase [Tobacco bushy top virus]
Length = 865
Score = 184 bits (468), Expect = 2e-44
Identities = 93/203 (45%), Positives = 124/203 (61%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS +AL++TH Y++F + L M N +AKDG KY
Sbjct: 532 PVCVGLDASRFDQHVSCDALRFTHSVYKRFVKGREVNKLLSWMYKNHALGSAKDGFVKYE 591
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V+ RMSGDMDTALGNC+LMV M C I HE+++NGDD V+ + +
Sbjct: 592 VEGCRMSGDMDTALGNCVLMVLMTRQLCQNLSIPHELMNNGDDCIVIFDRQYLSTFQDAV 651
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
WF ELGF MKVE LE+++FCQT PV+DG +WRMVR +S + KD + D E+ P
Sbjct: 652 EPWFRELGFTMKVEEPVYHLERVDFCQTRPVYDGKKWRMVRHISSIAKDCCSVIDWEQLP 711
Query: 92 YRIGEVSECGKALCDGLPIYSTF 24
+ ECG A+ G+PI+++F
Sbjct: 712 AWWNAIGECGIAVAGGIPIHNSF 734
>gb|AKQ00677.1| RNA-dependent RNA polymerase [Tobacco bushy top virus]
Length = 865
Score = 184 bits (468), Expect = 2e-44
Identities = 93/203 (45%), Positives = 124/203 (61%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS +AL++TH Y++F + L M N +AKDG KY
Sbjct: 532 PVCVGLDASRFDQHVSCDALRFTHSVYKRFVKGREVNKLLSWMYKNHALGSAKDGFVKYE 591
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V+ RMSGDMDTALGNC+LMV M C I HE+++NGDD V+ + +
Sbjct: 592 VEGCRMSGDMDTALGNCVLMVLMTRQLCKNLSIPHELMNNGDDCIVIFDRQYLSTFQDAV 651
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
WF ELGF MKVE LE+++FCQT PV+DG +WRMVR +S + KD + D E+ P
Sbjct: 652 EPWFRELGFTMKVEEPVYHLERVDFCQTRPVYDGKKWRMVRHISSIAKDCCSVIDWEQLP 711
Query: 92 YRIGEVSECGKALCDGLPIYSTF 24
+ ECG A+ G+PI+++F
Sbjct: 712 AWWNAIGECGIAVAGGIPIHNSF 734
>ref|NP_733848.2| RNA-dependent RNA polymerase [Tobacco bushy top virus]
gi|857283292|gb|AAN62863.2| RNA-dependent RNA polymerase
[Tobacco bushy top virus]
Length = 865
Score = 184 bits (468), Expect = 2e-44
Identities = 93/203 (45%), Positives = 124/203 (61%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS +AL++TH Y++F + L M N +AKDG KY
Sbjct: 532 PVCVGLDASRFDQHVSCDALRFTHSVYKRFVKGREVNKLLSWMYKNHALGSAKDGFVKYE 591
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V+ RMSGDMDTALGNC+LMV M C I HE+++NGDD V+ + +
Sbjct: 592 VEGCRMSGDMDTALGNCVLMVLMTRQLCKNLSIPHELMNNGDDCIVIFDRQYLSTFQDAV 651
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
WF ELGF MKVE LE+++FCQT PV+DG +WRMVR +S + KD + D E+ P
Sbjct: 652 EPWFRELGFTMKVEEPVYHLERVDFCQTRPVYDGKKWRMVRHISSIAKDCCSVIDWEQLP 711
Query: 92 YRIGEVSECGKALCDGLPIYSTF 24
+ ECG A+ G+PI+++F
Sbjct: 712 AWWNAIGECGIAVAGGIPIHNSF 734
>emb|CAX62133.1| RNA-dependent RNA polymerase [Tobacco bushy top virus]
Length = 557
Score = 184 bits (468), Expect = 2e-44
Identities = 93/203 (45%), Positives = 124/203 (61%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS +AL++TH Y++F + L M N +AKDG KY
Sbjct: 224 PVCVGLDASRFDQHVSCDALRFTHSVYKRFVKGREVNKLLSWMYKNHALGSAKDGFVKYE 283
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V+ RMSGDMDTALGNC+LMV M C I HE+++NGDD V+ + +
Sbjct: 284 VEGCRMSGDMDTALGNCVLMVLMTRQLCKNLSIPHELMNNGDDCIVIFDRQYLSTFQDAV 343
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
WF ELGF MKVE LE+++FCQT PV+DG +WRMVR +S + KD + D E+ P
Sbjct: 344 EPWFRELGFTMKVEEPVYHLERVDFCQTRPVYDGKKWRMVRHISSIAKDCCSVIDWEQLP 403
Query: 92 YRIGEVSECGKALCDGLPIYSTF 24
+ ECG A+ G+PI+++F
Sbjct: 404 AWWNAIGECGIAVAGGIPIHNSF 426
>emb|CBH71321.1| hypothetical protein [Tobacco bushy top virus]
Length = 557
Score = 184 bits (468), Expect = 2e-44
Identities = 93/203 (45%), Positives = 124/203 (61%)
Frame = -1
Query: 632 PCFISLDASRFDQHVSQEALKWTHKQYRKFNHDEDFVWCLDRMLNNKGYATAKDGGFKYT 453
P + LDASRFDQHVS +AL++TH Y++F + L M N +AKDG KY
Sbjct: 224 PVCVGLDASRFDQHVSCDALRFTHSVYKRFVKGREVNKLLSWMYKNHALGSAKDGFVKYE 283
Query: 452 VDRGRMSGDMDTALGNCLLMVAMVYSYCTEKGIRHEVIDNGDDITVVCSVEDKDRVVSGL 273
V+ RMSGDMDTALGNC+LMV M C I HE+++NGDD V+ + +
Sbjct: 284 VEGCRMSGDMDTALGNCVLMVLMTRQLCKNLSIPHELMNNGDDCIVIFDRQYLSTFQDAV 343
Query: 272 MEWFAELGFRMKVEASGNVLEKLEFCQTYPVFDGSRWRMVRGLSCLVKDTVLICDEEEAP 93
WF ELGF MKVE LE+++FCQT PV+DG +WRMVR +S + KD + D E+ P
Sbjct: 344 EPWFKELGFTMKVEEPVYHLERVDFCQTRPVYDGKKWRMVRHISSIAKDCCSVIDWEQLP 403
Query: 92 YRIGEVSECGKALCDGLPIYSTF 24
+ ECG A+ G+PI+++F
Sbjct: 404 AWWNAIGECGIAVAGGIPIHNSF 426