BLASTX nr result

ID: Anemarrhena21_contig00069207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00069207
         (365 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHZ65104.1| polymerization protein, partial [Opium poppy mosa...   137   3e-30
gb|AIU44175.1| RNA-dependent RNA polymerase, partial [Opium popp...   132   7e-29
emb|CAR85737.1| RNA-dependent RNA polymerase [Tobacco bushy top ...   130   3e-28
gb|AEM45990.1| RNA-dependent RNA-polymerase [Pea enation mosaic ...   130   3e-28
gb|AAU20330.1| RNA-dependent RNA-polymerase [Pea enation mosaic ...   130   3e-28
gb|AKQ00676.1| RNA-dependent RNA polymerase [Tobacco bushy top v...   129   8e-28
emb|CAD29819.1| RNA-directed RNA polymerase, partial [Tobacco bu...   128   2e-27
gb|AKQ00677.1| RNA-dependent RNA polymerase [Tobacco bushy top v...   128   2e-27
emb|CAI44017.1| RNA dependent RNA polymerase, partial [Tobacco b...   128   2e-27
gb|AKQ00678.1| RNA-dependent RNA polymerase [Tobacco bushy top v...   127   2e-27
ref|NP_733848.2| RNA-dependent RNA polymerase [Tobacco bushy top...   127   2e-27
emb|CAR85733.1| RNA-dependent RNA polymerase [Tobacco bushy top ...   127   2e-27
gb|AEM45994.1| RNA-dependent RNA-polymerase [Pea enation mosaic ...   127   2e-27
ref|NP_619714.1| RNA-dependent RNA polymerase [Groundnut rosette...   127   3e-27
emb|CAX62133.1| RNA-dependent RNA polymerase [Tobacco bushy top ...   127   3e-27
sp|Q67683.2|RDRP_GRVMC RecName: Full=RNA-directed RNA polymerase...   127   3e-27
emb|CAE17661.2| RNA-dependent RNA polymerase, partial [Tobacco b...   127   3e-27
emb|CAI44016.1| RNA dependent RNA polymerase, partial [Tobacco b...   127   3e-27
ref|YP_002302259.1| RNA-dependent RNA polymerase [Carrot mottle ...   126   5e-27
emb|CAG28951.1| RNA-directed RNA polymerase, partial [Tobacco bu...   126   5e-27

>gb|AHZ65104.1| polymerization protein, partial [Opium poppy mosaic virus]
          Length = 581

 Score =  137 bits (345), Expect = 3e-30
 Identities = 67/121 (55%), Positives = 85/121 (70%)
 Frame = -3

Query: 363 AFEKLKPFEEKFRAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFV 184
           AF+++  F    ++F + P + E+ V+ Y G ++ RYQNA E L S     S A V+TFV
Sbjct: 115 AFDEI--FVSDLKSFKVTPWTMEQVVDSYAGSQKTRYQNALESLKSQPLTRSDARVKTFV 172

Query: 183 KAEKINFTSKPDPAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCY 4
           KAEKINFT+KPDPAPRVIQPRD RFN+ F +Y   +E  +YK LGKLYKYPC+AKGFN  
Sbjct: 173 KAEKINFTAKPDPAPRVIQPRDPRFNLCFAKYTKPLEPMLYKQLGKLYKYPCIAKGFNAV 232

Query: 3   E 1
           E
Sbjct: 233 E 233


>gb|AIU44175.1| RNA-dependent RNA polymerase, partial [Opium poppy mosaic virus]
          Length = 851

 Score =  132 bits (333), Expect = 7e-29
 Identities = 62/109 (56%), Positives = 79/109 (72%)
 Frame = -3

Query: 327 RAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFVKAEKINFTSKPD 148
           ++F + P + E+ V+ Y G ++ RYQNA E L +     S A V+TFVKAEKINFT+KPD
Sbjct: 395 KSFKVTPWTMEQVVDSYAGSQKTRYQNALESLNTQPLTRSDARVKTFVKAEKINFTAKPD 454

Query: 147 PAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCYE 1
           PAPRVIQPRD RFN+ F +Y   +E  +YK LGKLY+YPC+AKGFN  E
Sbjct: 455 PAPRVIQPRDPRFNLCFAKYTKPLEPMLYKQLGKLYRYPCIAKGFNAVE 503


>emb|CAR85737.1| RNA-dependent RNA polymerase [Tobacco bushy top virus]
          Length = 557

 Score =  130 bits (328), Expect = 3e-28
 Identities = 66/121 (54%), Positives = 83/121 (68%)
 Frame = -3

Query: 363 AFEKLKPFEEKFRAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFV 184
           +F+K+   E   RAF + P + EE VN Y G ++VRY  A E L  +    + A V+TFV
Sbjct: 91  SFDKIDTSE--IRAFRVQPWTLEEVVNSYSGSQKVRYGQAVESLAVTPLSRNDARVKTFV 148

Query: 183 KAEKINFTSKPDPAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCY 4
           KAEKINFT+KPDPAPRVIQPRD RFN  F +Y   +E  +YK LGKLY++PC+AKGFN  
Sbjct: 149 KAEKINFTAKPDPAPRVIQPRDPRFNACFAKYTKPLEPLLYKQLGKLYQFPCIAKGFNAV 208

Query: 3   E 1
           E
Sbjct: 209 E 209


>gb|AEM45990.1| RNA-dependent RNA-polymerase [Pea enation mosaic virus-2]
          Length = 846

 Score =  130 bits (328), Expect = 3e-28
 Identities = 63/115 (54%), Positives = 78/115 (67%)
 Frame = -3

Query: 345 PFEEKFRAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFVKAEKIN 166
           P   + + F + P + +  V  Y G +R RY NA + ++S+      A V+TFVKAEKIN
Sbjct: 388 PSSRELKTFRVTPWTMDRVVESYTGSQRTRYANARDSILSNPLSPKDARVKTFVKAEKIN 447

Query: 165 FTSKPDPAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCYE 1
           FT+KPDPAPRVIQPRD RFNI   +YI  +E  +YKALGKLYKYP VAKGFN  E
Sbjct: 448 FTAKPDPAPRVIQPRDPRFNIVLAKYIKPLEPMLYKALGKLYKYPAVAKGFNAVE 502


>gb|AAU20330.1| RNA-dependent RNA-polymerase [Pea enation mosaic virus-2]
          Length = 846

 Score =  130 bits (328), Expect = 3e-28
 Identities = 63/115 (54%), Positives = 78/115 (67%)
 Frame = -3

Query: 345 PFEEKFRAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFVKAEKIN 166
           P   + + F + P + +  V  Y G +R RY NA + ++S+      A V+TFVKAEKIN
Sbjct: 388 PSSRELKTFRVTPWTMDRVVESYTGSQRTRYANARDSILSNPLSPKDARVKTFVKAEKIN 447

Query: 165 FTSKPDPAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCYE 1
           FT+KPDPAPRVIQPRD RFNI   +YI  +E  +YKALGKLYKYP VAKGFN  E
Sbjct: 448 FTAKPDPAPRVIQPRDPRFNIVLAKYIKPLEPMLYKALGKLYKYPAVAKGFNAVE 502


>gb|AKQ00676.1| RNA-dependent RNA polymerase [Tobacco bushy top virus]
          Length = 865

 Score =  129 bits (324), Expect = 8e-28
 Identities = 63/111 (56%), Positives = 78/111 (70%)
 Frame = -3

Query: 333 KFRAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFVKAEKINFTSK 154
           + +AF + P + EE VN Y G +RVRY  A E L  +    + A V+TFVKAEKINFT+K
Sbjct: 407 EIKAFRVQPWTLEEVVNSYTGSQRVRYGQAVESLAVTPLSRNDARVKTFVKAEKINFTAK 466

Query: 153 PDPAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCYE 1
           PDPAPRVIQPRD RFN  F +Y   +E  +YK LGKLY++PC+AKGFN  E
Sbjct: 467 PDPAPRVIQPRDPRFNACFAKYTKPLEPLLYKQLGKLYQFPCIAKGFNAVE 517


>emb|CAD29819.1| RNA-directed RNA polymerase, partial [Tobacco bushy top virus]
          Length = 183

 Score =  128 bits (321), Expect = 2e-27
 Identities = 66/121 (54%), Positives = 83/121 (68%)
 Frame = -3

Query: 363 AFEKLKPFEEKFRAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFV 184
           +F+K+   E K  AF + P + EE V+ Y G +RVRY  A E L  +    + A V+TFV
Sbjct: 35  SFDKINISEIK--AFRVQPWTLEEVVDSYTGSQRVRYGQAVESLAVTPLSRNDARVKTFV 92

Query: 183 KAEKINFTSKPDPAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCY 4
           KAEKINFT+KPDPAPRVIQPRD RFN  F +Y   +E  +YK LGKLY++PC+AKGFN  
Sbjct: 93  KAEKINFTAKPDPAPRVIQPRDPRFNACFAKYTKPLEPLLYKQLGKLYQFPCIAKGFNAV 152

Query: 3   E 1
           E
Sbjct: 153 E 153


>gb|AKQ00677.1| RNA-dependent RNA polymerase [Tobacco bushy top virus]
          Length = 865

 Score =  128 bits (321), Expect = 2e-27
 Identities = 66/121 (54%), Positives = 83/121 (68%)
 Frame = -3

Query: 363 AFEKLKPFEEKFRAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFV 184
           +F+K+   E K  AF + P + EE V+ Y G +RVRY  A E L  +    + A V+TFV
Sbjct: 399 SFDKINISEIK--AFRVQPWTLEEVVDSYTGSQRVRYGQAVESLAVTPLSRNDARVKTFV 456

Query: 183 KAEKINFTSKPDPAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCY 4
           KAEKINFT+KPDPAPRVIQPRD RFN  F +Y   +E  +YK LGKLY++PC+AKGFN  
Sbjct: 457 KAEKINFTAKPDPAPRVIQPRDPRFNACFAKYTKPLEPLLYKQLGKLYQFPCIAKGFNAV 516

Query: 3   E 1
           E
Sbjct: 517 E 517


>emb|CAI44017.1| RNA dependent RNA polymerase, partial [Tobacco bushy top virus]
          Length = 241

 Score =  128 bits (321), Expect = 2e-27
 Identities = 66/121 (54%), Positives = 83/121 (68%)
 Frame = -3

Query: 363 AFEKLKPFEEKFRAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFV 184
           +F+K+   E K  AF + P + EE V+ Y G +RVRY  A E L  +    + A V+TFV
Sbjct: 36  SFDKINISEIK--AFRVQPWTLEEVVDSYTGSQRVRYGQAVESLAVTPLSRNDARVKTFV 93

Query: 183 KAEKINFTSKPDPAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCY 4
           KAEKINFT+KPDPAPRVIQPRD RFN  F +Y   +E  +YK LGKLY++PC+AKGFN  
Sbjct: 94  KAEKINFTAKPDPAPRVIQPRDPRFNACFAKYTKPLEPLLYKQLGKLYQFPCIAKGFNAV 153

Query: 3   E 1
           E
Sbjct: 154 E 154


>gb|AKQ00678.1| RNA-dependent RNA polymerase [Tobacco bushy top virus]
          Length = 865

 Score =  127 bits (320), Expect = 2e-27
 Identities = 66/121 (54%), Positives = 82/121 (67%)
 Frame = -3

Query: 363 AFEKLKPFEEKFRAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFV 184
           +F+K+   E K  AF + P + EE V  Y G +RVRY  A E L  +    + A V+TFV
Sbjct: 399 SFDKINISEIK--AFRVQPWTLEEVVESYTGSQRVRYGQAVESLAVTPLSRNDARVKTFV 456

Query: 183 KAEKINFTSKPDPAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCY 4
           KAEKINFT+KPDPAPRVIQPRD RFN  F +Y   +E  +YK LGKLY++PC+AKGFN  
Sbjct: 457 KAEKINFTAKPDPAPRVIQPRDPRFNACFAKYTKPLEPLLYKQLGKLYQFPCIAKGFNAV 516

Query: 3   E 1
           E
Sbjct: 517 E 517


>ref|NP_733848.2| RNA-dependent RNA polymerase [Tobacco bushy top virus]
           gi|857283292|gb|AAN62863.2| RNA-dependent RNA polymerase
           [Tobacco bushy top virus]
          Length = 865

 Score =  127 bits (320), Expect = 2e-27
 Identities = 66/121 (54%), Positives = 83/121 (68%)
 Frame = -3

Query: 363 AFEKLKPFEEKFRAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFV 184
           +F+K+   E K  AF + P + EE V+ Y G +RVRY  A E L  +    + A V+TFV
Sbjct: 399 SFDKIDISEIK--AFRVQPWTLEEVVDSYTGSQRVRYGQAVESLAVTPLSRNDARVKTFV 456

Query: 183 KAEKINFTSKPDPAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCY 4
           KAEKINFT+KPDPAPRVIQPRD RFN  F +Y   +E  +YK LGKLY++PC+AKGFN  
Sbjct: 457 KAEKINFTAKPDPAPRVIQPRDPRFNACFAKYTKPLEPLLYKQLGKLYQFPCIAKGFNAV 516

Query: 3   E 1
           E
Sbjct: 517 E 517


>emb|CAR85733.1| RNA-dependent RNA polymerase [Tobacco bushy top virus]
          Length = 557

 Score =  127 bits (320), Expect = 2e-27
 Identities = 66/121 (54%), Positives = 82/121 (67%)
 Frame = -3

Query: 363 AFEKLKPFEEKFRAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFV 184
           +F+K+   E K  AF + P + EE V  Y G +RVRY  A E L  +    + A V+TFV
Sbjct: 91  SFDKINISEIK--AFRVQPWTLEEVVESYTGSQRVRYGQAVESLAVTPLSRNDARVKTFV 148

Query: 183 KAEKINFTSKPDPAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCY 4
           KAEKINFT+KPDPAPRVIQPRD RFN  F +Y   +E  +YK LGKLY++PC+AKGFN  
Sbjct: 149 KAEKINFTAKPDPAPRVIQPRDPRFNACFAKYTKPLEPLLYKQLGKLYQFPCIAKGFNAV 208

Query: 3   E 1
           E
Sbjct: 209 E 209


>gb|AEM45994.1| RNA-dependent RNA-polymerase [Pea enation mosaic virus-2]
          Length = 849

 Score =  127 bits (320), Expect = 2e-27
 Identities = 61/111 (54%), Positives = 77/111 (69%)
 Frame = -3

Query: 333 KFRAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFVKAEKINFTSK 154
           + + F + P + +  V  Y G +R RY NA + ++S+      A V+TFVKAEKINFT+K
Sbjct: 395 ELKTFRVTPWTMDRVVESYTGSQRTRYANARDSILSNPLSPKDARVKTFVKAEKINFTAK 454

Query: 153 PDPAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCYE 1
           PDPAPRVIQPRD RFNI   +YI  +E  +YKALG+LYKYP VAKGFN  E
Sbjct: 455 PDPAPRVIQPRDPRFNIVLAKYIKPLEPMLYKALGRLYKYPAVAKGFNAVE 505


>ref|NP_619714.1| RNA-dependent RNA polymerase [Groundnut rosette virus]
          Length = 839

 Score =  127 bits (319), Expect = 3e-27
 Identities = 62/109 (56%), Positives = 75/109 (68%)
 Frame = -3

Query: 327 RAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFVKAEKINFTSKPD 148
           + F + P S ++    YKG +RVRY+ A + L       S A V TF+KAEK+NF +KPD
Sbjct: 381 KQFRVTPWSLDDVWMSYKGSQRVRYKQAVDSLGMRPLSKSDARVSTFIKAEKVNFRAKPD 440

Query: 147 PAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCYE 1
           PAPRVIQPRD RFN  F +YI  +E  +YKALGKLYKYPCVAKGFN  E
Sbjct: 441 PAPRVIQPRDPRFNAVFAKYIKPLEPLLYKALGKLYKYPCVAKGFNAVE 489


>emb|CAX62133.1| RNA-dependent RNA polymerase [Tobacco bushy top virus]
          Length = 557

 Score =  127 bits (319), Expect = 3e-27
 Identities = 66/121 (54%), Positives = 82/121 (67%)
 Frame = -3

Query: 363 AFEKLKPFEEKFRAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFV 184
           +F+K+   E K  AF + P + EE V  Y G +RVRY  A E L  +    + A V+TFV
Sbjct: 91  SFDKIDISEIK--AFRVQPWTLEEVVESYTGSQRVRYGQAVESLAVTPLSRNDARVKTFV 148

Query: 183 KAEKINFTSKPDPAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCY 4
           KAEKINFT+KPDPAPRVIQPRD RFN  F +Y   +E  +YK LGKLY++PC+AKGFN  
Sbjct: 149 KAEKINFTAKPDPAPRVIQPRDPRFNACFAKYTKPLEPLLYKQLGKLYQFPCIAKGFNAV 208

Query: 3   E 1
           E
Sbjct: 209 E 209


>sp|Q67683.2|RDRP_GRVMC RecName: Full=RNA-directed RNA polymerase; Short=RdRp
          Length = 839

 Score =  127 bits (319), Expect = 3e-27
 Identities = 62/109 (56%), Positives = 75/109 (68%)
 Frame = -3

Query: 327 RAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFVKAEKINFTSKPD 148
           + F + P S ++    YKG +RVRY+ A + L       S A V TF+KAEK+NF +KPD
Sbjct: 381 KQFRVTPWSLDDVWMSYKGSQRVRYKQAVDSLGMRPLSKSDARVSTFIKAEKVNFRAKPD 440

Query: 147 PAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCYE 1
           PAPRVIQPRD RFN  F +YI  +E  +YKALGKLYKYPCVAKGFN  E
Sbjct: 441 PAPRVIQPRDPRFNAVFAKYIKPLEPLLYKALGKLYKYPCVAKGFNAVE 489


>emb|CAE17661.2| RNA-dependent RNA polymerase, partial [Tobacco bushy top virus]
          Length = 502

 Score =  127 bits (319), Expect = 3e-27
 Identities = 62/111 (55%), Positives = 78/111 (70%)
 Frame = -3

Query: 333 KFRAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFVKAEKINFTSK 154
           + +AF + P + EE V+ Y G +RVRY  A E L  +    + A V+TFVKAEKINFT+K
Sbjct: 44  EIKAFRVQPWTLEEVVDSYTGSQRVRYGQAVESLAVTPLSRNDARVKTFVKAEKINFTAK 103

Query: 153 PDPAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCYE 1
           PDPAPRVIQPRD RFN  F +Y   +E  +YK LGKLY++PC+AKGFN  E
Sbjct: 104 PDPAPRVIQPRDPRFNACFAKYTKPLEPLLYKQLGKLYQFPCIAKGFNAVE 154


>emb|CAI44016.1| RNA dependent RNA polymerase, partial [Tobacco bushy top virus]
          Length = 241

 Score =  127 bits (319), Expect = 3e-27
 Identities = 62/111 (55%), Positives = 78/111 (70%)
 Frame = -3

Query: 333 KFRAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFVKAEKINFTSK 154
           + +AF + P + EE V+ Y G +RVRY  A E L  +    + A V+TFVKAEKINFT+K
Sbjct: 44  EIKAFRVQPWTLEEVVDSYTGSQRVRYGQAVESLAVTPLSRNDARVKTFVKAEKINFTAK 103

Query: 153 PDPAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCYE 1
           PDPAPRVIQPRD RFN  F +Y   +E  +YK LGKLY++PC+AKGFN  E
Sbjct: 104 PDPAPRVIQPRDPRFNACFAKYTKPLEPLLYKQLGKLYQFPCIAKGFNAVE 154


>ref|YP_002302259.1| RNA-dependent RNA polymerase [Carrot mottle virus]
           gi|209972132|gb|ACJ03580.1| RNA-dependent RNA polymerase
           [Carrot mottle virus]
          Length = 870

 Score =  126 bits (317), Expect = 5e-27
 Identities = 57/112 (50%), Positives = 78/112 (69%)
 Frame = -3

Query: 336 EKFRAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFVKAEKINFTS 157
           +  +AF ++P + E+ V  Y G ++ RY  A + +         A V TF+KAEKINFT+
Sbjct: 414 DDIKAFRVVPWTMEQVVASYSGSQQTRYNTAMQSIYEKPFNRDDARVSTFIKAEKINFTA 473

Query: 156 KPDPAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCYE 1
           KPDPAPRVIQPRD RFNI F ++I  +E  +YKALG+LYK+PC+AKGFN ++
Sbjct: 474 KPDPAPRVIQPRDPRFNICFAKFIKPLEPMLYKALGRLYKHPCIAKGFNAFQ 525


>emb|CAG28951.1| RNA-directed RNA polymerase, partial [Tobacco bushy top virus]
          Length = 183

 Score =  126 bits (317), Expect = 5e-27
 Identities = 62/109 (56%), Positives = 75/109 (68%)
 Frame = -3

Query: 327 RAFPILPASREEFVNHYKGGRRVRYQNAYEKLMSSGKKNSHATVQTFVKAEKINFTSKPD 148
           + F I P + +E    Y G +RVRYQ A E L       S A V TF+KAEK+NF++KPD
Sbjct: 45  KQFRITPWTLDEVWQSYTGSQRVRYQQAVESLRLKPLTRSDARVSTFIKAEKVNFSAKPD 104

Query: 147 PAPRVIQPRDARFNIEFGRYIWKMEHKIYKALGKLYKYPCVAKGFNCYE 1
           PAPRVIQPRD RFN  F +YI  +E  +YKALG+LYKYPCVAKGF+  E
Sbjct: 105 PAPRVIQPRDPRFNAVFAQYIKPLEPVLYKALGRLYKYPCVAKGFSAVE 153


Top