BLASTX nr result
ID: Anemarrhena21_contig00068854
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00068854
(272 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEX94808.1| RNA polymerase beta' subunit (chloroplast) [Gilli... 56 1e-14
ref|YP_009129770.1| RNA polymerase beta'' subunit (chloroplast) ... 51 2e-13
ref|YP_009109124.1| RNA polymerase beta' subunit [Corallorhiza t... 51 3e-13
gb|AHI87517.1| RNA polymerase beta subunit (chloroplast) [Chiono... 56 3e-13
gb|AEX94816.1| RNA polymerase beta' subunit (chloroplast) [Aspar... 51 4e-13
gb|AEX94815.1| RNA polymerase beta' subunit (chloroplast) [Aspar... 51 4e-13
gb|AEX94827.1| RNA polymerase beta' subunit (chloroplast) [Cordy... 51 4e-13
gb|AEX94814.1| RNA polymerase beta' subunit (chloroplast) [Aphyl... 51 4e-13
gb|AEX94811.1| RNA polymerase beta' subunit (chloroplast) [Crinu... 51 4e-13
gb|AEX94810.1| RNA polymerase beta' subunit (chloroplast) [Amary... 51 4e-13
gb|ADO33438.1| RNA polymerase beta' subunit [Smilax china] 51 4e-13
gb|AEZ49469.1| RNA polymerase beta'' subunit [Albuca kirkii] 51 4e-13
gb|AEX94825.1| RNA polymerase beta' subunit (chloroplast) [Oziro... 51 4e-13
gb|AEX94823.1| RNA polymerase beta' subunit (chloroplast) [Drimi... 51 4e-13
gb|AEX94822.1| RNA polymerase beta' subunit (chloroplast) [Phorm... 51 4e-13
gb|AEX94821.1| RNA polymerase beta' subunit (chloroplast) [Dorya... 51 4e-13
gb|AEZ49490.1| RNA polymerase beta'' subunit, partial [Nolina at... 51 4e-13
gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maian... 51 4e-13
gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Lirio... 51 4e-13
gb|AEX94831.1| RNA polymerase beta' subunit (chloroplast) [Erios... 51 4e-13
>gb|AEX94808.1| RNA polymerase beta' subunit (chloroplast) [Gilliesia graminea]
Length = 1383
Score = 56.2 bits (134), Expect(2) = 1e-14
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+FWMTDPSNPVHLMSFSGA+ NAS
Sbjct: 119 MNPNFWMTDPSNPVHLMSFSGARGNAS 145
Score = 49.7 bits (117), Expect(2) = 1e-14
Identities = 25/35 (71%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILENR-RYENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE Y N+HAVEK QSI+IWYATSE LRQE
Sbjct: 84 FILEKHYHYGNVHAVEKLRQSIEIWYATSEYLRQE 118
>ref|YP_009129770.1| RNA polymerase beta'' subunit (chloroplast) [Vanilla planifolia]
gi|657406488|gb|AID52206.1| RNA polymerase beta''
subunit (chloroplast) [Vanilla planifolia]
Length = 1385
Score = 51.2 bits (121), Expect(2) = 2e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 115 MNPNFRMTDPSNPVHLMSFSGARANAS 141
Score = 50.4 bits (119), Expect(2) = 2e-13
Identities = 25/35 (71%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILE-NRRYENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE N Y N+H VEK QSI+IWYATSE LRQE
Sbjct: 80 FILEKNHHYGNVHVVEKLRQSIEIWYATSEYLRQE 114
>ref|YP_009109124.1| RNA polymerase beta' subunit [Corallorhiza trifida]
gi|704001480|gb|AIW51593.1| RNA polymerase beta' subunit
[Corallorhiza trifida]
Length = 1384
Score = 50.8 bits (120), Expect(2) = 3e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 115 MNPNFRMTDPSNPVHLMSFSGARGNAS 141
Score = 50.4 bits (119), Expect(2) = 3e-13
Identities = 25/35 (71%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILE-NRRYENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE N Y N+H VEK QSI+IWYATSE LRQE
Sbjct: 80 FILEKNHHYGNVHVVEKLRQSIEIWYATSEYLRQE 114
>gb|AHI87517.1| RNA polymerase beta subunit (chloroplast) [Chionographis japonica]
Length = 1382
Score = 56.2 bits (134), Expect(2) = 3e-13
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+FWMTDPSNPVHLMSFSGA+ NAS
Sbjct: 115 MNPNFWMTDPSNPVHLMSFSGARGNAS 141
Score = 45.1 bits (105), Expect(2) = 3e-13
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = -3
Query: 261 ENRRYENIHAVEKFHQSIQIWYATSE*LRQE 169
++ Y N+H VEK QSI+IWYATSE LRQE
Sbjct: 84 KHHHYGNVHWVEKLRQSIEIWYATSEYLRQE 114
>gb|AEX94816.1| RNA polymerase beta' subunit (chloroplast) [Asparagus asparagoides]
Length = 1389
Score = 50.8 bits (120), Expect(2) = 4e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 119 MNPNFRMTDPSNPVHLMSFSGARGNAS 145
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 25/35 (71%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILENRR-YENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE + Y N+HAVEK QSI+IWYATSE LRQE
Sbjct: 84 FILEKQHHYGNVHAVEKLRQSIEIWYATSEYLRQE 118
>gb|AEX94815.1| RNA polymerase beta' subunit (chloroplast) [Asparagus officinalis]
gi|374413193|gb|AEZ49471.1| RNA polymerase beta''
subunit, partial [Asparagus officinalis]
Length = 1389
Score = 50.8 bits (120), Expect(2) = 4e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 119 MNPNFRMTDPSNPVHLMSFSGARGNAS 145
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 25/35 (71%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILENRR-YENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE + Y N+HAVEK QSI+IWYATSE LRQE
Sbjct: 84 FILEKQHHYGNVHAVEKLRQSIEIWYATSEYLRQE 118
>gb|AEX94827.1| RNA polymerase beta' subunit (chloroplast) [Cordyline australis]
Length = 1388
Score = 50.8 bits (120), Expect(2) = 4e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 119 MNPNFRMTDPSNPVHLMSFSGARGNAS 145
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 25/35 (71%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILE-NRRYENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE + Y N+HAVEK QSI+IWYATSE LRQE
Sbjct: 84 FILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQE 118
>gb|AEX94814.1| RNA polymerase beta' subunit (chloroplast) [Aphyllanthes
monspeliensis]
Length = 1387
Score = 50.8 bits (120), Expect(2) = 4e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 119 MNPNFRMTDPSNPVHLMSFSGARGNAS 145
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 25/35 (71%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILE-NRRYENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE + Y N+HAVEK QSI+IWYATSE LRQE
Sbjct: 84 FILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQE 118
>gb|AEX94811.1| RNA polymerase beta' subunit (chloroplast) [Crinum asiaticum]
Length = 1387
Score = 50.8 bits (120), Expect(2) = 4e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 119 MNPNFRMTDPSNPVHLMSFSGARGNAS 145
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 25/35 (71%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILE-NRRYENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE + Y N+HAVEK QSI+IWYATSE LRQE
Sbjct: 84 FILEKDHHYGNVHAVEKLRQSIEIWYATSEYLRQE 118
>gb|AEX94810.1| RNA polymerase beta' subunit (chloroplast) [Amaryllis belladonna]
Length = 1387
Score = 50.8 bits (120), Expect(2) = 4e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 119 MNPNFRMTDPSNPVHLMSFSGARGNAS 145
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 25/35 (71%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILE-NRRYENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE + Y N+HAVEK QSI+IWYATSE LRQE
Sbjct: 84 FILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQE 118
>gb|ADO33438.1| RNA polymerase beta' subunit [Smilax china]
Length = 1387
Score = 50.8 bits (120), Expect(2) = 4e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 119 MNPNFRMTDPSNPVHLMSFSGARGNAS 145
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 25/35 (71%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILE-NRRYENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE + Y N+HAVEK QSI+IWYATSE LRQE
Sbjct: 84 FILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQE 118
>gb|AEZ49469.1| RNA polymerase beta'' subunit [Albuca kirkii]
Length = 1386
Score = 50.8 bits (120), Expect(2) = 4e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 119 MNPNFRMTDPSNPVHLMSFSGARGNAS 145
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 25/35 (71%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILE-NRRYENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE + Y N+HAVEK QSI+IWYATSE LRQE
Sbjct: 84 FILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQE 118
>gb|AEX94825.1| RNA polymerase beta' subunit (chloroplast) [Oziroe biflora]
Length = 1386
Score = 50.8 bits (120), Expect(2) = 4e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 119 MNPNFRMTDPSNPVHLMSFSGARGNAS 145
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 25/35 (71%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILE-NRRYENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE + Y N+HAVEK QSI+IWYATSE LRQE
Sbjct: 84 FILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQE 118
>gb|AEX94823.1| RNA polymerase beta' subunit (chloroplast) [Drimia altissima]
Length = 1386
Score = 50.8 bits (120), Expect(2) = 4e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 119 MNPNFRMTDPSNPVHLMSFSGARGNAS 145
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 25/35 (71%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILE-NRRYENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE + Y N+HAVEK QSI+IWYATSE LRQE
Sbjct: 84 FILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQE 118
>gb|AEX94822.1| RNA polymerase beta' subunit (chloroplast) [Phormium tenax]
gi|374413241|gb|AEZ49491.1| RNA polymerase beta''
subunit, partial [Phormium tenax]
Length = 1386
Score = 50.8 bits (120), Expect(2) = 4e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 119 MNPNFRMTDPSNPVHLMSFSGARGNAS 145
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 25/35 (71%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILE-NRRYENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE + Y N+HAVEK QSI+IWYATSE LRQE
Sbjct: 84 FILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQE 118
>gb|AEX94821.1| RNA polymerase beta' subunit (chloroplast) [Doryanthes palmeri]
Length = 1386
Score = 50.8 bits (120), Expect(2) = 4e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 119 MNPNFRMTDPSNPVHLMSFSGARGNAS 145
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 25/35 (71%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILE-NRRYENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE + Y N+HAVEK QSI+IWYATSE LRQE
Sbjct: 84 FILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQE 118
>gb|AEZ49490.1| RNA polymerase beta'' subunit, partial [Nolina atopocarpa]
Length = 1385
Score = 50.8 bits (120), Expect(2) = 4e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 119 MNPNFRMTDPSNPVHLMSFSGARGNAS 145
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 25/35 (71%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILE-NRRYENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE + Y N+HAVEK QSI+IWYATSE LRQE
Sbjct: 84 FILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQE 118
>gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum stellatum]
Length = 1385
Score = 50.8 bits (120), Expect(2) = 4e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 119 MNPNFRMTDPSNPVHLMSFSGARGNAS 145
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 25/35 (71%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILE-NRRYENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE + Y N+HAVEK QSI+IWYATSE LRQE
Sbjct: 84 FILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQE 118
>gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Liriope spicata]
Length = 1385
Score = 50.8 bits (120), Expect(2) = 4e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 119 MNPNFRMTDPSNPVHLMSFSGARGNAS 145
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 25/35 (71%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILE-NRRYENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE + Y N+HAVEK QSI+IWYATSE LRQE
Sbjct: 84 FILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQE 118
>gb|AEX94831.1| RNA polymerase beta' subunit (chloroplast) [Eriospermum cervicorne]
Length = 1385
Score = 50.8 bits (120), Expect(2) = 4e-13
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 169 MNPDFWMTDPSNPVHLMSFSGAQENAS 89
MNP+F MTDPSNPVHLMSFSGA+ NAS
Sbjct: 119 MNPNFRMTDPSNPVHLMSFSGARGNAS 145
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 25/35 (71%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 FILE-NRRYENIHAVEKFHQSIQIWYATSE*LRQE 169
FILE + Y N+HAVEK QSI+IWYATSE LRQE
Sbjct: 84 FILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQE 118