BLASTX nr result

ID: Anemarrhena21_contig00067173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00067173
         (331 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KMS97551.1| hypothetical protein BVRB_5g126110 isoform C [Bet...    62   2e-07
ref|XP_010695623.1| PREDICTED: DNA mismatch repair protein MSH2 ...    62   2e-07
ref|XP_010663546.1| PREDICTED: DNA mismatch repair protein MSH2 ...    57   5e-06
ref|XP_010265279.1| PREDICTED: DNA mismatch repair protein MSH2 ...    57   5e-06
ref|XP_009404391.1| PREDICTED: DNA mismatch repair protein MSH2 ...    57   5e-06
ref|XP_010663545.1| PREDICTED: DNA mismatch repair protein MSH2 ...    57   5e-06

>gb|KMS97551.1| hypothetical protein BVRB_5g126110 isoform C [Beta vulgaris subsp.
           vulgaris]
          Length = 199

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 28/44 (63%), Positives = 36/44 (81%)
 Frame = -3

Query: 206 AVGRDAAWAHHFLQEFSTLPSDQMDLKEAVQHVNKLRSDMENDA 75
           AV   AA AH FL+EF+ LP +QMDLK+A+QHVNK++SD+E DA
Sbjct: 146 AVSEGAARAHRFLKEFAELPLEQMDLKQALQHVNKMKSDLEEDA 189


>ref|XP_010695623.1| PREDICTED: DNA mismatch repair protein MSH2 [Beta vulgaris subsp.
            vulgaris] gi|870844625|gb|KMS97549.1| hypothetical
            protein BVRB_5g126110 isoform A [Beta vulgaris subsp.
            vulgaris]
          Length = 944

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 28/44 (63%), Positives = 36/44 (81%)
 Frame = -3

Query: 206  AVGRDAAWAHHFLQEFSTLPSDQMDLKEAVQHVNKLRSDMENDA 75
            AV   AA AH FL+EF+ LP +QMDLK+A+QHVNK++SD+E DA
Sbjct: 891  AVSEGAARAHRFLKEFAELPLEQMDLKQALQHVNKMKSDLEEDA 934


>ref|XP_010663546.1| PREDICTED: DNA mismatch repair protein MSH2 isoform X2 [Vitis
           vinifera]
          Length = 918

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = -3

Query: 203 VGRDAAWAHHFLQEFSTLPSDQMDLKEAVQHVNKLRSDMENDA 75
           + R AA AH FL+EFS LP ++MDLKEA+Q V+KL++D+E DA
Sbjct: 866 ISRGAARAHQFLKEFSDLPLEKMDLKEALQQVSKLKNDLEKDA 908


>ref|XP_010265279.1| PREDICTED: DNA mismatch repair protein MSH2 [Nelumbo nucifera]
          Length = 942

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 26/47 (55%), Positives = 37/47 (78%)
 Frame = -3

Query: 203  VGRDAAWAHHFLQEFSTLPSDQMDLKEAVQHVNKLRSDMENDATCDC 63
            + + AA AH FL+EF+TLP ++MD K+A+Q V+KLR+D+E DA  DC
Sbjct: 890  ISKGAARAHQFLKEFATLPLEEMDFKQALQQVSKLRNDLEKDA-ADC 935


>ref|XP_009404391.1| PREDICTED: DNA mismatch repair protein MSH2 [Musa acuminata subsp.
            malaccensis]
          Length = 942

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 26/39 (66%), Positives = 33/39 (84%)
 Frame = -3

Query: 191  AAWAHHFLQEFSTLPSDQMDLKEAVQHVNKLRSDMENDA 75
            AA AH FL+EFS LP DQMDLK+A++HV KLR+++E DA
Sbjct: 894  AARAHRFLEEFSALPLDQMDLKQAMEHVCKLRNELEKDA 932


>ref|XP_010663545.1| PREDICTED: DNA mismatch repair protein MSH2 isoform X1 [Vitis
            vinifera] gi|297734165|emb|CBI15412.3| unnamed protein
            product [Vitis vinifera]
          Length = 945

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = -3

Query: 203  VGRDAAWAHHFLQEFSTLPSDQMDLKEAVQHVNKLRSDMENDA 75
            + R AA AH FL+EFS LP ++MDLKEA+Q V+KL++D+E DA
Sbjct: 893  ISRGAARAHQFLKEFSDLPLEKMDLKEALQQVSKLKNDLEKDA 935


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