BLASTX nr result

ID: Anemarrhena21_contig00065270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00065270
         (342 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    65   3e-10
gb|KEH39112.1| hypothetical protein MTR_2g090260 [Medicago trunc...    65   2e-08

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 64.7 bits (156), Expect(2) = 3e-10
 Identities = 27/80 (33%), Positives = 40/80 (50%)
 Frame = -1

Query: 339  KKALTTESWKKICKPXXXXXXXXXXXXEFNNAGMFKLAWDMVQKTKKWAKFMDARFMKNK 160
            K  + T SWK +C+P              NNA M KLAW+++    +WA  +  RF    
Sbjct: 770  KPKVCTVSWKILCRPWSEGGLDIKSTRLINNAAMLKLAWNLLSSNSQWAVLLKRRFFSQG 829

Query: 159  SPINYYKSSSIWLGIKKKLT 100
             PI Y+  SS+W G+K  ++
Sbjct: 830  QPIRYFVKSSVWHGVKNHMS 849



 Score = 26.6 bits (57), Expect(2) = 3e-10
 Identities = 9/35 (25%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -3

Query: 121 WNQKKAYLT-LQHDLFWALGYNSNCSIWFDNWSGK 20
           W+  K +++ L+ +  W +G     ++W +NW G+
Sbjct: 841 WHGVKNHMSILRQNKLWIVGTGDRINLWTNNWLGE 875


>gb|KEH39112.1| hypothetical protein MTR_2g090260 [Medicago truncatula]
          Length = 229

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 26/87 (29%), Positives = 48/87 (55%)
 Frame = -1

Query: 342 NKKALTTESWKKICKPXXXXXXXXXXXXEFNNAGMFKLAWDMVQKTKKWAKFMDARFMKN 163
           N++ L   +W K+C P            + N AG  K+ WD++Q   +W +F+ +R ++N
Sbjct: 75  NQRKLVIIAWNKVCTPLKEGGLGVRNLSDINEAGNLKVCWDIMQSDLQWDQFIRSRILRN 134

Query: 162 KSPINYYKSSSIWLGIKKKLTSHCSMI 82
           K P+NY+ SSS+  G + K ++   ++
Sbjct: 135 KKPVNYHVSSSVLSGARHKYSTKLKLL 161


Top