BLASTX nr result

ID: Anemarrhena21_contig00064781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00064781
         (378 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]    72   2e-12
ref|XP_010108229.1| 30S ribosomal protein S12-B [Morus notabilis...    70   7e-10

>emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]
          Length = 564

 Score = 71.6 bits (174), Expect(2) = 2e-12
 Identities = 36/55 (65%), Positives = 39/55 (70%)
 Frame = -1

Query: 174 PRFPRGGWAVFPRRPPSGGRKRTRVGSARFAFSC*ERTYHSLIEARVHAGKAQQS 10
           PRFPRGG AVFP+RP SGGRKRTRVGSARFAFSC E    S    R   G+ + S
Sbjct: 433 PRFPRGGRAVFPQRPASGGRKRTRVGSARFAFSCVESFSFSYRSPRPRRGRVKSS 487



 Score = 26.6 bits (57), Expect(2) = 2e-12
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -2

Query: 281 RMHCISIDEKEAGFTE*E 228
           R HC+S  EKE  FTE E
Sbjct: 405 RAHCVSTGEKEVDFTEEE 422


>ref|XP_010108229.1| 30S ribosomal protein S12-B [Morus notabilis]
           gi|587931382|gb|EXC18469.1| 30S ribosomal protein S12-B
           [Morus notabilis]
          Length = 158

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 34/40 (85%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
 Frame = -1

Query: 186 CLLD--PRFPRGGWAVFPRRPPSGGRKRTRVGSARFAFSC 73
           CLLD  PRFPRGG AV P+RP SGGRKRTRVGSARFAFSC
Sbjct: 114 CLLDSHPRFPRGGRAVIPQRPASGGRKRTRVGSARFAFSC 153


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