BLASTX nr result

ID: Anemarrhena21_contig00062926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00062926
         (454 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT30970.1| Protein transport protein Sec61 subunit alpha [Ae...    46   6e-08
gb|EMT33101.1| Protein transport protein Sec61 subunit alpha [Ae...    47   5e-07
ref|XP_002504986.1| type II secretory pathway family [Micromonas...    43   2e-06
ref|XP_007515006.1| protein transport protein SEC61 alpha subuni...    43   3e-06

>gb|EMT30970.1| Protein transport protein Sec61 subunit alpha [Aegilops tauschii]
          Length = 498

 Score = 46.2 bits (108), Expect(2) = 6e-08
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = -2

Query: 171 NPFHALFFYFVFILSACALFSKTLIDLFGS 82
           NPFHALF Y VF+LSACALFSKT I++ GS
Sbjct: 368 NPFHALF-YVVFMLSACALFSKTWIEVSGS 396



 Score = 37.0 bits (84), Expect(2) = 6e-08
 Identities = 18/24 (75%), Positives = 18/24 (75%)
 Frame = -1

Query: 73  DVAMLKEQQGVMPGHRESKLQKEL 2
           DV    EQQ VMPGHRES LQKEL
Sbjct: 414 DVGAPAEQQMVMPGHRESNLQKEL 437


>gb|EMT33101.1| Protein transport protein Sec61 subunit alpha [Aegilops tauschii]
          Length = 510

 Score = 46.6 bits (109), Expect(2) = 5e-07
 Identities = 27/37 (72%), Positives = 30/37 (81%), Gaps = 2/37 (5%)
 Frame = -2

Query: 186 SLAAV--NPFHALFFYFVFILSACALFSKTLIDLFGS 82
           SLA V  NPFHALF Y VF+LSACALFSKT I++ GS
Sbjct: 363 SLADVVANPFHALF-YVVFMLSACALFSKTWIEVSGS 398



 Score = 33.5 bits (75), Expect(2) = 5e-07
 Identities = 15/23 (65%), Positives = 19/23 (82%)
 Frame = -1

Query: 70  VAMLKEQQGVMPGHRESKLQKEL 2
           +A  +EQQ VMPGHRES L++EL
Sbjct: 427 LATEQEQQMVMPGHRESNLEREL 449


>ref|XP_002504986.1| type II secretory pathway family [Micromonas sp. RCC299]
           gi|226520255|gb|ACO66244.1| type II secretory pathway
           family [Micromonas sp. RCC299]
          Length = 475

 Score = 43.1 bits (100), Expect(2) = 2e-06
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -2

Query: 177 AVNPFHALFFYFVFILSACALFSKTLIDLFGS 82
           A NP HA+F Y  F+LSACALFSKT I++ GS
Sbjct: 356 AANPLHAVF-YLTFMLSACALFSKTWIEVSGS 386



 Score = 35.0 bits (79), Expect(2) = 2e-06
 Identities = 19/27 (70%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
 Frame = -1

Query: 79  SRDVA-MLKEQQGVMPGHRESKLQKEL 2
           +RDVA  LK+QQ  M GHRES LQKEL
Sbjct: 388 ARDVAKQLKQQQMFMVGHRESSLQKEL 414


>ref|XP_007515006.1| protein transport protein SEC61 alpha subunit [Bathycoccus
           prasinos] gi|412986820|emb|CCO15246.1| protein transport
           protein SEC61 alpha subunit [Bathycoccus prasinos]
          Length = 476

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -2

Query: 177 AVNPFHALFFYFVFILSACALFSKTLIDLFGS 82
           A NP HA+F Y  F+LSACALFSKT I++ GS
Sbjct: 357 AANPLHAVF-YLTFMLSACALFSKTWIEVSGS 387



 Score = 34.3 bits (77), Expect(2) = 3e-06
 Identities = 18/27 (66%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
 Frame = -1

Query: 79  SRDVA-MLKEQQGVMPGHRESKLQKEL 2
           +RDVA  LK+QQ  M GHRES LQ+EL
Sbjct: 389 ARDVAKQLKQQQMFMTGHRESSLQREL 415


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