BLASTX nr result

ID: Anemarrhena21_contig00059109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00059109
         (293 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFM84647.1| polyprotein, partial [Gooseberry vein banding ass...    74   4e-11
gb|AFM84645.1| polyprotein, partial [Gooseberry vein banding ass...    74   4e-11
gb|AFM84644.1| polyprotein, partial [Gooseberry vein banding ass...    74   4e-11
gb|AFM84642.1| polyprotein, partial [Gooseberry vein banding ass...    74   4e-11
ref|YP_006495799.1| polyprotein [Gooseberry vein banding associa...    74   4e-11
gb|AEE39279.1| polyprotein [Gooseberry vein banding associated v...    74   4e-11
gb|AEE39276.1| polyprotein [Gooseberry vein banding associated v...    74   4e-11
gb|AEE39273.1| polyprotein [Gooseberry vein banding associated v...    74   4e-11
gb|AEE39270.1| polyprotein [Gooseberry vein banding associated v...    74   4e-11
gb|AAK35157.1|AF298883_1 polyprotein, partial [Gooseberry vein b...    74   4e-11
gb|AFM84640.1| polyprotein, partial [Gooseberry vein banding ass...    74   5e-11
ref|YP_009121747.1| ORF3 [Yacon necrotic mottle virus] gi|697738...    73   8e-11
gb|AAK35158.1|AF299074_1 polyprotein, partial [Spiraea yellow le...    72   1e-10
ref|YP_009116631.1| polyprotein [Rubus yellow net virus] gi|6951...    72   2e-10
gb|AAN32881.1|AF468454_1 polyprotein [Rubus yellow net virus]          72   2e-10
ref|YP_004581513.1| RNaseH/reverse transcriptase [Sweet potato b...    70   4e-10
ref|YP_003208050.1| putative polyprotein [Pelargonium vein bandi...    70   7e-10
gb|AJO68267.1| polyprotein, partial [Sweet potato badnavirus B]        69   9e-10
gb|AHB61260.1| polyprotein [Rubus yellow net virus]                    69   9e-10
ref|YP_002321513.1| polyprotein [Bougainvillea chlorotic vein ba...    69   9e-10

>gb|AFM84647.1| polyprotein, partial [Gooseberry vein banding associated virus]
          Length = 241

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = -1

Query: 290 LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRLLY 111
           +RTDC++IV FY+ +++ + SR RWL+F +   NTGV + FEH+ GKDNVLAD+ SRL  
Sbjct: 125 IRTDCQAIVAFYEKLNANKPSRVRWLNFCDYITNTGVKVVFEHIKGKDNVLADTLSRLTQ 184

Query: 110 T 108
           T
Sbjct: 185 T 185


>gb|AFM84645.1| polyprotein, partial [Gooseberry vein banding associated virus]
           gi|392856309|gb|AFM84646.1| polyprotein, partial
           [Gooseberry vein banding associated virus]
          Length = 241

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = -1

Query: 290 LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRLLY 111
           +RTDC++IV FY+ +++ + SR RWL+F +   NTGV + FEH+ GKDNVLAD+ SRL  
Sbjct: 125 IRTDCQAIVAFYEKLNANKPSRVRWLNFCDYITNTGVKVVFEHIKGKDNVLADTLSRLTQ 184

Query: 110 T 108
           T
Sbjct: 185 T 185


>gb|AFM84644.1| polyprotein, partial [Gooseberry vein banding associated virus]
          Length = 241

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = -1

Query: 290 LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRLLY 111
           +RTDC++IV FY+ +++ + SR RWL+F +   NTGV + FEH+ GKDNVLAD+ SRL  
Sbjct: 125 IRTDCQAIVAFYEKLNANKPSRVRWLNFCDYITNTGVKVVFEHIKGKDNVLADTLSRLTQ 184

Query: 110 T 108
           T
Sbjct: 185 T 185


>gb|AFM84642.1| polyprotein, partial [Gooseberry vein banding associated virus]
          Length = 241

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = -1

Query: 290 LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRLLY 111
           +RTDC++IV FY+ +++ + SR RWL+F +   NTGV + FEH+ GKDNVLAD+ SRL  
Sbjct: 125 IRTDCQAIVAFYEKLNANKPSRVRWLNFCDYITNTGVKVVFEHIKGKDNVLADTLSRLTQ 184

Query: 110 T 108
           T
Sbjct: 185 T 185


>ref|YP_006495799.1| polyprotein [Gooseberry vein banding associated virus]
            gi|392856295|gb|AFM84639.1| polyprotein [Gooseberry vein
            banding associated virus]
          Length = 1910

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = -1

Query: 290  LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRLLY 111
            +RTDC++IV FY+ +++ + SR RWL+F +   NTGV + FEH+ GKDNVLAD+ SRL  
Sbjct: 1794 IRTDCQAIVAFYEKLNANKPSRVRWLNFCDYITNTGVKVVFEHIKGKDNVLADTLSRLTQ 1853

Query: 110  T 108
            T
Sbjct: 1854 T 1854


>gb|AEE39279.1| polyprotein [Gooseberry vein banding associated virus]
          Length = 1910

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = -1

Query: 290  LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRLLY 111
            +RTDC++IV FY+ +++ + SR RWL+F +   NTGV + FEH+ GKDNVLAD+ SRL  
Sbjct: 1794 IRTDCQAIVAFYEKLNANKPSRVRWLNFCDYITNTGVKVVFEHIKGKDNVLADTLSRLTQ 1853

Query: 110  T 108
            T
Sbjct: 1854 T 1854


>gb|AEE39276.1| polyprotein [Gooseberry vein banding associated virus]
          Length = 1910

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = -1

Query: 290  LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRLLY 111
            +RTDC++IV FY+ +++ + SR RWL+F +   NTGV + FEH+ GKDNVLAD+ SRL  
Sbjct: 1794 IRTDCQAIVAFYEKLNANKPSRVRWLNFCDYITNTGVKVVFEHIKGKDNVLADTLSRLTQ 1853

Query: 110  T 108
            T
Sbjct: 1854 T 1854


>gb|AEE39273.1| polyprotein [Gooseberry vein banding associated virus]
          Length = 1910

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = -1

Query: 290  LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRLLY 111
            +RTDC++IV FY+ +++ + SR RWL+F +   NTGV + FEH+ GKDNVLAD+ SRL  
Sbjct: 1794 IRTDCQAIVAFYEKLNANKPSRVRWLNFCDYITNTGVKVVFEHIKGKDNVLADTLSRLTQ 1853

Query: 110  T 108
            T
Sbjct: 1854 T 1854


>gb|AEE39270.1| polyprotein [Gooseberry vein banding associated virus]
          Length = 1910

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = -1

Query: 290  LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRLLY 111
            +RTDC++IV FY+ +++ + SR RWL+F +   NTGV + FEH+ GKDNVLAD+ SRL  
Sbjct: 1794 IRTDCQAIVAFYEKLNANKPSRVRWLNFCDYITNTGVKVVFEHIKGKDNVLADTLSRLTQ 1853

Query: 110  T 108
            T
Sbjct: 1854 T 1854


>gb|AAK35157.1|AF298883_1 polyprotein, partial [Gooseberry vein banding associated virus]
          Length = 328

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = -1

Query: 290 LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRLLY 111
           +RTDC++IV FY+ +++ + SR RWL+F +   NTGV + FEH+ GKDNVLAD+ SRL  
Sbjct: 212 IRTDCQAIVAFYEKLNANKPSRVRWLNFCDYITNTGVKVVFEHIKGKDNVLADTLSRLTQ 271

Query: 110 T 108
           T
Sbjct: 272 T 272


>gb|AFM84640.1| polyprotein, partial [Gooseberry vein banding associated virus]
           gi|392856299|gb|AFM84641.1| polyprotein, partial
           [Gooseberry vein banding associated virus]
           gi|392856303|gb|AFM84643.1| polyprotein, partial
           [Gooseberry vein banding associated virus]
          Length = 241

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = -1

Query: 290 LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRLLY 111
           +RTDC++IV FY+ +++ + SR RWL+F +   NTGV + FEH+ GKDNVLAD+ SRL  
Sbjct: 125 VRTDCQAIVAFYEKLNANKPSRVRWLNFCDYITNTGVKVVFEHIKGKDNVLADTLSRLTQ 184

Query: 110 T 108
           T
Sbjct: 185 T 185


>ref|YP_009121747.1| ORF3 [Yacon necrotic mottle virus] gi|697738779|gb|AIT58609.1| ORF3
            [Yacon necrotic mottle virus]
          Length = 2031

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 32/59 (54%), Positives = 44/59 (74%)
 Frame = -1

Query: 290  LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRLL 114
            LRTDC++I++FY   +S ++SR RWL F +    TGV IN EH+ GK+NVLADS SR++
Sbjct: 1758 LRTDCQAIISFYNKTNSNKASRVRWLKFSDIITGTGVTINMEHIDGKNNVLADSLSRMV 1816


>gb|AAK35158.1|AF299074_1 polyprotein, partial [Spiraea yellow leafspot virus]
          Length = 456

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 30/61 (49%), Positives = 46/61 (75%)
 Frame = -1

Query: 290 LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRLLY 111
           +RTDC++I++FY+ +++ + SR RWLSF +   NTGV + FEH+ GK+N +AD+ SRL  
Sbjct: 212 IRTDCQAIISFYEKLNANKPSRVRWLSFCDYITNTGVQVKFEHIKGKNNQIADTLSRLAQ 271

Query: 110 T 108
           T
Sbjct: 272 T 272


>ref|YP_009116631.1| polyprotein [Rubus yellow net virus] gi|695133379|gb|AIS93167.1|
            polyprotein [Rubus yellow net virus]
          Length = 1976

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 30/58 (51%), Positives = 45/58 (77%)
 Frame = -1

Query: 290  LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRL 117
            +RTDC++I+ FY+ +++K+ SR RWL+F +   N+GV + FEH+ GKDN LAD+ SRL
Sbjct: 1776 IRTDCQAIITFYEKLNAKKPSRVRWLAFCDYITNSGVRMKFEHIKGKDNQLADNLSRL 1833


>gb|AAN32881.1|AF468454_1 polyprotein [Rubus yellow net virus]
          Length = 410

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 30/58 (51%), Positives = 45/58 (77%)
 Frame = -1

Query: 290 LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRL 117
           +RTDC++I+ FY+ +++K+ SR RWL+F +   N+GV + FEH+ GKDN LAD+ SRL
Sbjct: 210 IRTDCQAIITFYEKLNAKKPSRVRWLAFCDYITNSGVRMKFEHIKGKDNQLADNLSRL 267


>ref|YP_004581513.1| RNaseH/reverse transcriptase [Sweet potato badnavirus A]
           gi|237846574|gb|ACN56746.1| RNaseH/reverse transcriptase
           [Sweet potato badnavirus A]
          Length = 794

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 30/61 (49%), Positives = 43/61 (70%)
 Frame = -1

Query: 290 LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRLLY 111
           +RTDCE+IV+F+    S + SR RW+SF +    TG+ I  EH+ GKDN+LAD  SRL++
Sbjct: 589 IRTDCEAIVSFFNKSASNKPSRARWISFTDYITGTGIKIRIEHIDGKDNILADYLSRLVF 648

Query: 110 T 108
           +
Sbjct: 649 S 649


>ref|YP_003208050.1| putative polyprotein [Pelargonium vein banding virus]
            gi|258547408|gb|ACV74337.1| putative polyprotein
            [Pelargonium vein banding virus]
          Length = 1970

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 30/63 (47%), Positives = 44/63 (69%)
 Frame = -1

Query: 290  LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRLLY 111
            LRTDC++IV+F+  +   + SR RW+SF +     G+ +N EH+ GKDNVLAD+ SRL++
Sbjct: 1765 LRTDCQAIVSFHNKMAQNKPSRVRWISFTDFITGLGIKVNIEHIDGKDNVLADTLSRLIF 1824

Query: 110  TPQ 102
              Q
Sbjct: 1825 KIQ 1827


>gb|AJO68267.1| polyprotein, partial [Sweet potato badnavirus B]
          Length = 370

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
 Frame = -1

Query: 290 LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRLLY 111
           +RTDC++IV+F+    S + SR RW+SF +    TG+ I  EH+ GKDN LAD  SRL++
Sbjct: 259 IRTDCQAIVSFFNKSDSNKPSRARWISFTDYITGTGIKIRIEHIDGKDNTLADYLSRLVF 318

Query: 110 TPQSTLGSVVVA--SSQLAKANQHH 42
                  S+++A   +Q  ++  HH
Sbjct: 319 -------SLIIAEWKTQGMRSTAHH 336


>gb|AHB61260.1| polyprotein [Rubus yellow net virus]
          Length = 1971

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 29/57 (50%), Positives = 43/57 (75%)
 Frame = -1

Query: 290  LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSR 120
            +RTDC +I+ FY+ +++K+ SR RWL+F +   N+GV + FEH+ GKDN LAD+ SR
Sbjct: 1771 IRTDCHAIITFYEKLNAKKPSRVRWLAFCDYITNSGVKMKFEHIKGKDNQLADNLSR 1827


>ref|YP_002321513.1| polyprotein [Bougainvillea chlorotic vein banding virus]
            gi|154354401|gb|ABS76283.1| polyprotein [Bougainvillea
            chlorotic vein banding virus]
          Length = 2252

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 35/89 (39%), Positives = 53/89 (59%)
 Frame = -1

Query: 290  LRTDCESIVNFYKNIHSKRSSRRRWLSFRERCLNTGVYINFEHVSGKDNVLADSRSRLLY 111
            LRTDC++I+++Y   +S + SR RW++F +   NTG  I FEH+ GK NVLAD+ SR+  
Sbjct: 2063 LRTDCQAIISYYNKSNSNKPSRARWIAFTDYITNTGTNIKFEHIEGKLNVLADALSRITC 2122

Query: 110  TPQSTLGSVVVASSQLAKANQHHSYLKVL 24
                    +  A SQ   A +   ++KV+
Sbjct: 2123 -------YLCTAGSQGCLAPEEDDHMKVM 2144


Top