BLASTX nr result

ID: Anemarrhena21_contig00058290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00058290
         (742 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008797418.1| PREDICTED: pentatricopeptide repeat-containi...    57   1e-10
ref|XP_010909909.1| PREDICTED: pentatricopeptide repeat-containi...    52   2e-07
ref|XP_009420600.1| PREDICTED: pentatricopeptide repeat-containi...    57   9e-06

>ref|XP_008797418.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Phoenix dactylifera]
           gi|672151422|ref|XP_008797419.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Phoenix dactylifera]
           gi|672151424|ref|XP_008797420.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Phoenix dactylifera]
           gi|672151448|ref|XP_008797421.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Phoenix dactylifera]
          Length = 389

 Score = 57.4 bits (137), Expect(3) = 1e-10
 Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 23/104 (22%)
 Frame = -2

Query: 501 HRFRCRHRIYDSTIGRLSAACRYASLKEILDMQKQFRDDFEGEGFGIRLRS--------- 349
           +RFRC+HRIY+ T+ RL+AA R  +++ IL+ QK++ DD   EGF +RL S         
Sbjct: 58  YRFRCKHRIYEITVRRLAAAGRPDAVEAILEEQKRYPDDIAREGFAVRLISLYGKAGMPA 117

Query: 348 --------------SRNVNPFYSLLMTFTGCGWFEKVIEAFEEV 259
                          R+V  F +LL      G  +++  AF E+
Sbjct: 118 NAAATFDQLPALGCPRSVMSFNALLSACADAGDSDRMAAAFREI 161



 Score = 29.6 bits (65), Expect(3) = 1e-10
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -1

Query: 586 RTLKYDINYLFNERNLDWLVSSFK 515
           + LK  +NYLF E N D LV++FK
Sbjct: 29  KRLKTTVNYLFREHNPDKLVAAFK 52



 Score = 26.2 bits (56), Expect(3) = 1e-10
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -3

Query: 254 SI*PNGILYSILIKVLCE 201
           SI PN   Y+ILI+VLCE
Sbjct: 167 SIVPNVFSYNILIRVLCE 184


>ref|XP_010909909.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Elaeis guineensis]
          Length = 420

 Score = 51.6 bits (122), Expect(3) = 2e-07
 Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 23/104 (22%)
 Frame = -2

Query: 501 HRFRCRHRIYDSTIGRLSAACRYASLKEILDMQKQFRDDFEGEGFGIRLRS--------- 349
           +RFRC+HRIY+  + RL+A  R  +++ IL+ QK++  D   EGF +RL S         
Sbjct: 89  YRFRCKHRIYEIVVRRLAAVGRPDAVEAILEEQKRYPADIAREGFAVRLISLYGKAGMPA 148

Query: 348 --------------SRNVNPFYSLLMTFTGCGWFEKVIEAFEEV 259
                         SR+V  F +LL      G  +++   F E+
Sbjct: 149 NAAASFHQLPALGCSRSVMSFNALLSACADAGDSDRMFAVFREI 192



 Score = 28.1 bits (61), Expect(3) = 2e-07
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -1

Query: 601 P*TEARTLKYDINYLFNERNLDWLVSSFK 515
           P +  + LK  INYL  E N D LV++FK
Sbjct: 55  PNSSPKRLKTTINYLSREHNPDKLVAAFK 83



 Score = 21.9 bits (45), Expect(3) = 2e-07
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 254 SI*PNGILYSILIKVLCE 201
           SI PN   Y+ILI+  CE
Sbjct: 198 SIVPNIFSYNILIRSFCE 215


>ref|XP_009420600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Musa acuminata subsp. malaccensis]
          Length = 401

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 23/104 (22%)
 Frame = -2

Query: 501 HRFRCRHRIYDSTIGRLSAACRYASLKEILDMQKQFRDDFEGEGFGIRLRS--------- 349
           +RFRCRHRIY+  + RL  A R  +++ IL+ QK+F  D   EGF +RL S         
Sbjct: 65  YRFRCRHRIYEIAVRRLEKAGRLDAVEAILEAQKRFPSDLAREGFAVRLISLYGKASMAT 124

Query: 348 --------------SRNVNPFYSLLMTFTGCGWFEKVIEAFEEV 259
                          R+V  F +LL  F   G  E ++ AF ++
Sbjct: 125 HAATTFRQLPALGTPRSVMSFNALLTAFADSGDVEGLVAAFRDI 168


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