BLASTX nr result

ID: Anemarrhena21_contig00058134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00058134
         (339 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK29467.1| polyprotein-like [Solanum chilense]                     60   7e-07
emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]    58   3e-06
gb|AJE29370.1| putative gag protein [Coffea canephora]                 56   8e-06
emb|CAN72271.1| hypothetical protein VITISV_025564 [Vitis vinifera]    56   8e-06

>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
 Frame = -3

Query: 328 RFDVKSFNGKGNIL-IWSRRGKALVMKEELYKALFGEENKHTSIVI*RLKQLG*KSAEHD 152
           +++V  FNG   +  +W RR K L++++ L+KAL G+  K  S+ +   ++L  K+A   
Sbjct: 5   KYEVAKFNGDKPVFSMWQRRMKDLLIQQGLHKALGGKSKKPESMKLEDWEELDEKAASAI 64

Query: 151 RVMSGG*GAVRCDDGDFYLSLWIKIEGLYMTKFLLNKLYLEKQF*SL 11
           R+           D +    +W K+E LYM+K L NKLYL+KQ  +L
Sbjct: 65  RLHLTDDVVNNIVDEESACGIWTKLENLYMSKTLTNKLYLKKQLYTL 111


>emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]
          Length = 127

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 34/104 (32%), Positives = 59/104 (56%)
 Frame = -3

Query: 334 TTRFDVKSFNGKGNILIWSRRGKALVMKEELYKALFGEENKHTSIVI*RLKQLG*KSAEH 155
           + +FDV  F+G GN  +W RR K L++++ + KAL+G++ +  + +    K L  K A  
Sbjct: 6   SAKFDVVKFDGFGNFDLWQRRVKDLLVQQGMVKALYGKQPEGMNNM--DWKDLEVKVAAT 63

Query: 154 DRVMSGG*GAVRCDDGDFYLSLWIKIEGLYMTKFLLNKLYLEKQ 23
            R+           D +   ++W+K+E  YM+K L NKLYL+++
Sbjct: 64  IRLCLADDVMYHVMDEESPTAIWLKLESQYMSKLLTNKLYLKQK 107


>gb|AJE29370.1| putative gag protein [Coffea canephora]
          Length = 433

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
 Frame = -3

Query: 334 TTRFDVKSFNGKGNILIWSRRGKALVMKEELYKALFGEENKHTSIVI*RLKQLG*KSAEH 155
           T +F ++ FNG  +  +W RR K +++++ L KAL G+  K  S+     ++L  + A  
Sbjct: 5   TIQFPIQPFNGTTSFTLWQRRVKDVLVQQGLAKALNGKNKKPESMNDDEFEELDARCAST 64

Query: 154 DRVMSGG*GAVR--CDDGDFYLSLWIKIEGLYMTKFLLNKLYLEKQF*SL 11
            R+       +    D+ D    LW K+E LY+ K L NKL+L++QF +L
Sbjct: 65  IRLYVAD-NIINNVIDEKDSAADLWKKLEKLYLAKSLSNKLHLKRQFYAL 113


>emb|CAN72271.1| hypothetical protein VITISV_025564 [Vitis vinifera]
          Length = 986

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
 Frame = -3

Query: 331  TRFDVKSFNGKGNILIWSRRGKALVMKEELYKALFGEENKHTSIVI*RLKQLG*KSAEHD 152
            T+F+V+ F+G+ N  +W  + +AL++++ L K L G E   T++             E+D
Sbjct: 885  TKFEVEKFDGRNNFSLWHIKMRALLVQQRLSKVLKGIEALLTTM----------SDEEND 934

Query: 151  RVMSGG*GAVRCDDG----------DFYLSLWIKIEGLYMTKFLLNKLYLEK 26
             +M     A+    G          D    LW+K+E L+MTK L N+LYL+K
Sbjct: 935  ELMEKXHSAILLRLGNEVLREITNEDIVAKLWLKLESLHMTKSLTNRLYLKK 986


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