BLASTX nr result

ID: Anemarrhena21_contig00057622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00057622
         (315 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008806115.1| PREDICTED: pentatricopeptide repeat-containi...    77   6e-12
ref|XP_010943831.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    69   9e-10
ref|XP_009419424.1| PREDICTED: pentatricopeptide repeat-containi...    63   9e-08

>ref|XP_008806115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Phoenix dactylifera]
          Length = 649

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 47/107 (43%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
 Frame = -1

Query: 312 ALPICTA---MLRFNFPTFSKPHISPKGFLFSSLSASPAVNLDSLQTQFQKQSIPIPTSQ 142
           +LP  TA   ML+F     S      K   FSS SA  AV    +++  Q Q I +    
Sbjct: 5   SLPFLTASNPMLKFKCLRLSLHPHEAKNLFFSSSSAVAAVAPVVIESISQPQRI-VSNLG 63

Query: 141 SQVQDTHFLPLSLDPRSFIFALIQCRTTTQIKQIHAQAVSTSVIENL 1
           ++V +T F P+SLDPRSF+ AL+QC   TQ+KQ+HA A++TS+IENL
Sbjct: 64  TRVPETRFFPISLDPRSFVAALVQCWNPTQVKQVHALAITTSMIENL 110


>ref|XP_010943831.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Elaeis guineensis]
          Length = 803

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
 Frame = -1

Query: 291 MLRFNFPTFS-KPHISPKGFLFSSLSASPAVNLDSLQTQFQKQSIPIPTSQSQVQDTHFL 115
           ML+F     S  PH +   +  SSL+ + A  +  + +  Q Q I    S  +V +THF 
Sbjct: 1   MLKFKCLRLSLHPHEAKNLYFTSSLAVAAAAPV-VVGSISQPQRI---VSNLRVPETHFF 56

Query: 114 PLSLDPRSFIFALIQCRTTTQIKQIHAQAVSTSVIENL 1
           P+SLDPRSF+ AL+QCR+ +Q+ ++HA A++TS+IENL
Sbjct: 57  PISLDPRSFVAALVQCRSPSQVDKVHALAITTSMIENL 94


>ref|XP_009419424.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Musa acuminata subsp. malaccensis]
          Length = 629

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 36/97 (37%), Positives = 57/97 (58%)
 Frame = -1

Query: 291 MLRFNFPTFSKPHISPKGFLFSSLSASPAVNLDSLQTQFQKQSIPIPTSQSQVQDTHFLP 112
           ML      FS   +  K +LFSS  +S A +L ++   F      +P ++S  Q+T F P
Sbjct: 1   MLEGKRSAFSIISLEAKKYLFSS--SSSAASLSAVLDPF------LPATESAAQETPFSP 52

Query: 111 LSLDPRSFIFALIQCRTTTQIKQIHAQAVSTSVIENL 1
             L PRSF+ AL++CR+  +IK++HA A + ++I+NL
Sbjct: 53  APLHPRSFVSALVRCRSPAEIKKVHALATTAAMIDNL 89


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