BLASTX nr result

ID: Anemarrhena21_contig00057076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00057076
         (247 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008796595.1| PREDICTED: pentatricopeptide repeat-containi...    82   2e-13
ref|XP_010939763.1| PREDICTED: pentatricopeptide repeat-containi...    79   1e-12
ref|XP_009403088.1| PREDICTED: pentatricopeptide repeat-containi...    70   4e-10

>ref|XP_008796595.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52620
           [Phoenix dactylifera]
          Length = 820

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 8/87 (9%)
 Frame = -2

Query: 237 SPKLFKLAHKIPQILRT----PNWEQTLNEKF----QEEEEIPSILSQIPDPTSAVAFFH 82
           S +L ++A  I QILRT    P+WE+ L++ F    +EEE I  +L+++PDP SA+AFF 
Sbjct: 23  SSRLRRVADSIAQILRTRETNPHWERALDDAFSLEEEEEEAIAPVLARLPDPDSALAFFD 82

Query: 81  WAHHLRSPSAPPPDSLSYSALLKNLAQ 1
           WA   R P A PPDSLSYS LL+ LA+
Sbjct: 83  WARRRRPPWADPPDSLSYSTLLRILAK 109


>ref|XP_010939763.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52620
           [Elaeis guineensis] gi|743849992|ref|XP_010939764.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620 [Elaeis guineensis]
           gi|743849995|ref|XP_010939765.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g52620
           [Elaeis guineensis]
          Length = 814

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 7/84 (8%)
 Frame = -2

Query: 231 KLFKLAHKIPQILRT----PNWEQTLNEKF---QEEEEIPSILSQIPDPTSAVAFFHWAH 73
           +L +LA  I QILR+    P+WE+ L++ F   ++EE I  +L+++PDP SA+AFF WA 
Sbjct: 20  RLRRLADSIAQILRSRDTNPHWERALDDAFSPEEDEEAIAPVLARLPDPDSALAFFDWAR 79

Query: 72  HLRSPSAPPPDSLSYSALLKNLAQ 1
             R P A PPDSLSYSALL  LA+
Sbjct: 80  RRRPPWADPPDSLSYSALLWLLAK 103


>ref|XP_009403088.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52620
           [Musa acuminata subsp. malaccensis]
           gi|695031172|ref|XP_009403089.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g52620
           [Musa acuminata subsp. malaccensis]
           gi|695031174|ref|XP_009403090.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g52620
           [Musa acuminata subsp. malaccensis]
           gi|695031176|ref|XP_009403091.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g52620
           [Musa acuminata subsp. malaccensis]
          Length = 824

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
 Frame = -2

Query: 240 PSPKLFKLAHKIPQILRT----PNWEQTLNEKFQ---EEEEIPSILSQIPDPTSAVAFFH 82
           P P++ KLA  + ++L T    P WEQTL E      EEE +  I+++I DP +A+ FF 
Sbjct: 22  PHPRVRKLADSVVRVLLTRKADPRWEQTLEEMLSCHAEEEYMAPIIARIRDPDAALDFFD 81

Query: 81  WAHHLRSPSAPPPDSLSYSALLKNLA 4
           WA   R   A PPDSLSYS LL+ LA
Sbjct: 82  WARRRRPSWADPPDSLSYSELLRLLA 107


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