BLASTX nr result
ID: Anemarrhena21_contig00056738
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00056738
(269 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010235028.1| PREDICTED: 60S ribosomal export protein NMD3... 102 1e-19
dbj|BAJ97149.1| predicted protein [Hordeum vulgare subsp. vulgare] 101 2e-19
dbj|BAJ94330.1| predicted protein [Hordeum vulgare subsp. vulgar... 101 2e-19
gb|AFW87776.1| hypothetical protein ZEAMMB73_353235 [Zea mays] 99 9e-19
ref|NP_001132875.1| uncharacterized protein LOC100194368 [Zea ma... 99 1e-18
ref|XP_008664559.1| PREDICTED: uncharacterized protein LOC100194... 99 1e-18
ref|XP_002464890.1| hypothetical protein SORBIDRAFT_01g028310 [S... 98 2e-18
ref|XP_010930835.1| PREDICTED: 60S ribosomal export protein NMD3... 98 2e-18
ref|NP_001065473.1| Os10g0573900 [Oryza sativa Japonica Group] g... 97 3e-18
ref|XP_006662098.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma... 97 3e-18
gb|EAZ17064.1| hypothetical protein OsJ_32560 [Oryza sativa Japo... 97 3e-18
gb|EAY79612.1| hypothetical protein OsI_34753 [Oryza sativa Indi... 97 3e-18
ref|XP_008796291.1| PREDICTED: 60S ribosomal export protein NMD3... 97 4e-18
ref|XP_009393512.1| PREDICTED: 60S ribosomal export protein NMD3... 96 9e-18
ref|XP_004983563.1| PREDICTED: 60S ribosomal export protein NMD3... 94 5e-17
gb|AAK00432.1|AC060755_2 hypothetical protein [Oryza sativa Japo... 83 6e-14
ref|XP_010685854.1| PREDICTED: 60S ribosomal export protein NMD3... 81 3e-13
ref|XP_010685853.1| PREDICTED: 60S ribosomal export protein NMD3... 81 3e-13
ref|XP_012483709.1| PREDICTED: 60S ribosomal export protein NMD3... 80 4e-13
gb|KHN08788.1| 60S ribosomal export protein NMD3 [Glycine soja] 80 5e-13
>ref|XP_010235028.1| PREDICTED: 60S ribosomal export protein NMD3 [Brachypodium
distachyon]
Length = 523
Score = 102 bits (254), Expect = 1e-19
Identities = 42/71 (59%), Positives = 54/71 (76%)
Frame = -1
Query: 215 MTANPSPDLSPSGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSS 36
M + P + SGMF+P+QTAGTVLCC CG + PNP+NMC RCLRAR DIT +PR ++
Sbjct: 2 MPGSAPPPAAGSGMFVPTQTAGTVLCCMCGVSMQPNPANMCARCLRARVDITEGVPRHAA 61
Query: 35 LTFCPDCSSYL 3
+ +CPDC+SYL
Sbjct: 62 VVYCPDCTSYL 72
>dbj|BAJ97149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 521
Score = 101 bits (251), Expect = 2e-19
Identities = 42/71 (59%), Positives = 53/71 (74%)
Frame = -1
Query: 215 MTANPSPDLSPSGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSS 36
M +P + SGMF+P+QTAGTVLCC CG + PNP+NMC RCLRAR DIT +PR ++
Sbjct: 1 MMPGSAPPAAGSGMFVPTQTAGTVLCCMCGVSMQPNPANMCARCLRARVDITEGVPRNAA 60
Query: 35 LTFCPDCSSYL 3
+ +CPDC SYL
Sbjct: 61 VVYCPDCFSYL 71
>dbj|BAJ94330.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326507208|dbj|BAJ95681.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326532436|dbj|BAK05147.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 521
Score = 101 bits (251), Expect = 2e-19
Identities = 42/71 (59%), Positives = 53/71 (74%)
Frame = -1
Query: 215 MTANPSPDLSPSGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSS 36
M +P + SGMF+P+QTAGTVLCC CG + PNP+NMC RCLRAR DIT +PR ++
Sbjct: 1 MMPGSAPPAAGSGMFVPTQTAGTVLCCMCGVSMQPNPANMCARCLRARVDITEGVPRNAA 60
Query: 35 LTFCPDCSSYL 3
+ +CPDC SYL
Sbjct: 61 VVYCPDCFSYL 71
>gb|AFW87776.1| hypothetical protein ZEAMMB73_353235 [Zea mays]
Length = 525
Score = 99.4 bits (246), Expect = 9e-19
Identities = 41/71 (57%), Positives = 52/71 (73%)
Frame = -1
Query: 215 MTANPSPDLSPSGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSS 36
M +P +GMF+P+ TAGTVLCC CG + PNP+NMC RCLRAR DIT +PR ++
Sbjct: 1 MQPGSAPAAGGTGMFVPAATAGTVLCCMCGVSMQPNPANMCARCLRARVDITEGVPRHAA 60
Query: 35 LTFCPDCSSYL 3
+ +CPDCSSYL
Sbjct: 61 VVYCPDCSSYL 71
>ref|NP_001132875.1| uncharacterized protein LOC100194368 [Zea mays]
gi|195612302|gb|ACG27981.1| nonsense-mediated mRNA decay
protein 3 [Zea mays]
Length = 525
Score = 99.0 bits (245), Expect = 1e-18
Identities = 41/71 (57%), Positives = 51/71 (71%)
Frame = -1
Query: 215 MTANPSPDLSPSGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSS 36
M P +GMF+P+ TAGTVLCC CG + PNP+NMC RCLRAR DIT +PR ++
Sbjct: 1 MLPGSEPAAGGTGMFVPAATAGTVLCCMCGVSMQPNPANMCARCLRARVDITEGVPRHAA 60
Query: 35 LTFCPDCSSYL 3
+ +CPDCSSYL
Sbjct: 61 VVYCPDCSSYL 71
>ref|XP_008664559.1| PREDICTED: uncharacterized protein LOC100194368 isoform X1 [Zea
mays] gi|194695634|gb|ACF81901.1| unknown [Zea mays]
gi|414867863|tpg|DAA46420.1| TPA: nonsense-mediated mRNA
decay protein 3 isoform 1 [Zea mays]
gi|414867864|tpg|DAA46421.1| TPA: nonsense-mediated mRNA
decay protein 3 isoform 2 [Zea mays]
Length = 525
Score = 99.0 bits (245), Expect = 1e-18
Identities = 41/71 (57%), Positives = 51/71 (71%)
Frame = -1
Query: 215 MTANPSPDLSPSGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSS 36
M P +GMF+P+ TAGTVLCC CG + PNP+NMC RCLRAR DIT +PR ++
Sbjct: 1 MLPGSEPAAGGTGMFVPAATAGTVLCCMCGVSMQPNPANMCARCLRARVDITEGVPRHAA 60
Query: 35 LTFCPDCSSYL 3
+ +CPDCSSYL
Sbjct: 61 VVYCPDCSSYL 71
>ref|XP_002464890.1| hypothetical protein SORBIDRAFT_01g028310 [Sorghum bicolor]
gi|241918744|gb|EER91888.1| hypothetical protein
SORBIDRAFT_01g028310 [Sorghum bicolor]
Length = 525
Score = 98.2 bits (243), Expect = 2e-18
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = -1
Query: 215 MTANPSPDLSPSGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSS 36
M +P +GMF+P+ TAGTVLCC CG + PNP+NMC RCLR+R DIT +PR ++
Sbjct: 1 MMPGSAPAAGGAGMFVPAATAGTVLCCMCGVSMQPNPANMCARCLRSRVDITEGVPRHAA 60
Query: 35 LTFCPDCSSYL 3
+ +CPDCSSYL
Sbjct: 61 VVYCPDCSSYL 71
>ref|XP_010930835.1| PREDICTED: 60S ribosomal export protein NMD3 [Elaeis guineensis]
Length = 510
Score = 97.8 bits (242), Expect = 2e-18
Identities = 40/64 (62%), Positives = 50/64 (78%)
Frame = -1
Query: 194 DLSPSGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSSLTFCPDC 15
+L SGMF+P+QT GTVLCC CG ++PNP+NMCVRCLR+R DIT LPR ++ CP+C
Sbjct: 2 ELGASGMFVPAQTVGTVLCCICGVTMAPNPTNMCVRCLRSRVDITEGLPRHGAVVHCPEC 61
Query: 14 SSYL 3
SYL
Sbjct: 62 RSYL 65
>ref|NP_001065473.1| Os10g0573900 [Oryza sativa Japonica Group]
gi|78709040|gb|ABB48015.1| NMD3 family protein,
expressed [Oryza sativa Japonica Group]
gi|113640005|dbj|BAF27310.1| Os10g0573900 [Oryza sativa
Japonica Group] gi|215765823|dbj|BAG87520.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 523
Score = 97.4 bits (241), Expect = 3e-18
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = -1
Query: 182 SGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSSLTFCPDCSSYL 3
SGMF+P+QT GTVLCC CG + PNP+NMC RC+RAR DIT +PR +++ +CPDC+SYL
Sbjct: 12 SGMFVPTQTVGTVLCCICGVAMQPNPANMCARCIRARVDITEGVPRHAAVVYCPDCTSYL 71
>ref|XP_006662098.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal export protein
NMD3-like [Oryza brachyantha]
Length = 520
Score = 97.4 bits (241), Expect = 3e-18
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = -1
Query: 182 SGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSSLTFCPDCSSYL 3
SGMF+P+QT GTVLCC CG + PNP+NMC RCLRAR DIT +PR +++ +CPDC+SY+
Sbjct: 12 SGMFVPTQTVGTVLCCICGVAMQPNPANMCARCLRARVDITEGVPRHAAVVYCPDCTSYI 71
>gb|EAZ17064.1| hypothetical protein OsJ_32560 [Oryza sativa Japonica Group]
Length = 501
Score = 97.4 bits (241), Expect = 3e-18
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = -1
Query: 182 SGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSSLTFCPDCSSYL 3
SGMF+P+QT GTVLCC CG + PNP+NMC RC+RAR DIT +PR +++ +CPDC+SYL
Sbjct: 12 SGMFVPTQTVGTVLCCICGVAMQPNPANMCARCIRARVDITEGVPRHAAVVYCPDCTSYL 71
>gb|EAY79612.1| hypothetical protein OsI_34753 [Oryza sativa Indica Group]
Length = 523
Score = 97.4 bits (241), Expect = 3e-18
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = -1
Query: 182 SGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSSLTFCPDCSSYL 3
SGMF+P+QT GTVLCC CG + PNP+NMC RC+RAR DIT +PR +++ +CPDC+SYL
Sbjct: 12 SGMFVPTQTVGTVLCCICGVAMQPNPANMCARCIRARVDITEGVPRHAAVVYCPDCTSYL 71
>ref|XP_008796291.1| PREDICTED: 60S ribosomal export protein NMD3 [Phoenix dactylifera]
Length = 516
Score = 97.1 bits (240), Expect = 4e-18
Identities = 39/64 (60%), Positives = 51/64 (79%)
Frame = -1
Query: 194 DLSPSGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSSLTFCPDC 15
+L SGMF+P+QT GTVLCC CG ++PNP+NMC+RCLR+R DIT LPR +++ CP+C
Sbjct: 2 ELGASGMFVPAQTVGTVLCCICGVAMAPNPANMCLRCLRSRVDITEGLPRHAAVVHCPEC 61
Query: 14 SSYL 3
SYL
Sbjct: 62 RSYL 65
>ref|XP_009393512.1| PREDICTED: 60S ribosomal export protein NMD3 [Musa acuminata subsp.
malaccensis]
Length = 517
Score = 95.9 bits (237), Expect = 9e-18
Identities = 41/64 (64%), Positives = 49/64 (76%)
Frame = -1
Query: 194 DLSPSGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSSLTFCPDC 15
DLS SGMF+PSQT GTVLCC CG + PNP+NMCV CLR+R DIT L R +++ CP+C
Sbjct: 3 DLSASGMFVPSQTVGTVLCCICGVAMPPNPANMCVGCLRSRVDITEGLTRHAAVVHCPEC 62
Query: 14 SSYL 3
SYL
Sbjct: 63 RSYL 66
>ref|XP_004983563.1| PREDICTED: 60S ribosomal export protein NMD3 [Setaria italica]
Length = 525
Score = 93.6 bits (231), Expect = 5e-17
Identities = 37/60 (61%), Positives = 47/60 (78%)
Frame = -1
Query: 182 SGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSSLTFCPDCSSYL 3
+GMF+P+ TAGTVLCC CG + PNP+NMC RCLR R DIT +PR +++ +CPDC SYL
Sbjct: 12 AGMFVPAATAGTVLCCMCGVAMQPNPANMCARCLRGRIDITEGVPRHAAVVYCPDCCSYL 71
>gb|AAK00432.1|AC060755_2 hypothetical protein [Oryza sativa Japonica Group]
Length = 711
Score = 83.2 bits (204), Expect = 6e-14
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = -1
Query: 158 TAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSSLTFCPDCSSYL 3
T GTVLCC CG + PNP+NMC RC+RAR DIT +PR +++ +CPDC+SYL
Sbjct: 208 TVGTVLCCICGVAMQPNPANMCARCIRARVDITEGVPRHAAVVYCPDCTSYL 259
>ref|XP_010685854.1| PREDICTED: 60S ribosomal export protein NMD3 isoform X2 [Beta
vulgaris subsp. vulgaris] gi|870853458|gb|KMT05339.1|
hypothetical protein BVRB_7g174740 [Beta vulgaris subsp.
vulgaris]
Length = 520
Score = 80.9 bits (198), Expect = 3e-13
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = -1
Query: 182 SGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSSLTFCPDCSSYL 3
+GMF+ QT G VLCC CG + PN +NMCVRCLR+ DIT L ++ ++ FCPDC++YL
Sbjct: 11 AGMFVVHQTIGNVLCCKCGVPMQPNAANMCVRCLRSEVDITEGLLKQVTILFCPDCATYL 70
>ref|XP_010685853.1| PREDICTED: 60S ribosomal export protein NMD3 isoform X1 [Beta
vulgaris subsp. vulgaris]
Length = 690
Score = 80.9 bits (198), Expect = 3e-13
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = -1
Query: 182 SGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSSLTFCPDCSSYL 3
+GMF+ QT G VLCC CG + PN +NMCVRCLR+ DIT L ++ ++ FCPDC++YL
Sbjct: 181 AGMFVVHQTIGNVLCCKCGVPMQPNAANMCVRCLRSEVDITEGLLKQVTILFCPDCATYL 240
>ref|XP_012483709.1| PREDICTED: 60S ribosomal export protein NMD3-like [Gossypium
raimondii] gi|763766439|gb|KJB33654.1| hypothetical
protein B456_006G024500 [Gossypium raimondii]
Length = 506
Score = 80.5 bits (197), Expect = 4e-13
Identities = 34/60 (56%), Positives = 42/60 (70%)
Frame = -1
Query: 182 SGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSSLTFCPDCSSYL 3
S MF+ QT GTVLCC CG ++PNP+NMCV CLR+ DIT L + ++ CPDC SYL
Sbjct: 3 SDMFVVPQTRGTVLCCKCGISMAPNPANMCVTCLRSEVDITEGLRKHVTIMHCPDCDSYL 62
>gb|KHN08788.1| 60S ribosomal export protein NMD3 [Glycine soja]
Length = 510
Score = 80.1 bits (196), Expect = 5e-13
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = -1
Query: 182 SGMFIPSQTAGTVLCCTCGERISPNPSNMCVRCLRARTDITSPLPRRSSLTFCPDCSSYL 3
SGMF+ SQT G+VLCC CG + PN +NMCV+CLR+ DIT L +R L CP+C SYL
Sbjct: 11 SGMFMVSQTIGSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLLKRLVLVHCPECESYL 70