BLASTX nr result

ID: Anemarrhena21_contig00055221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00055221
         (327 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]      54   1e-07
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc...    53   4e-07
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    49   5e-07
emb|CCH50976.1| T4.15 [Malus x robusta]                                49   6e-07

>gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]
          Length = 605

 Score = 54.3 bits (129), Expect(2) = 1e-07
 Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 7/59 (11%)
 Frame = +2

Query: 116 CTNYP-------RKE*WERVTEQRLRK*ISLLKNQFSFMIGRSIMESIPLLRQLLQIFR 271
           CTNY          + WERV E RLR+  S+ KNQF FM GRS ME+I L+RQL++ +R
Sbjct: 57  CTNYRGIKLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMERYR 115



 Score = 27.7 bits (60), Expect(2) = 1e-07
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 42  LTWLVKLFNIV-ETNEMPNKCISTLVVQTILEKND 143
           + WL KLFN++   N+MP +   +++V     K D
Sbjct: 19  IVWLTKLFNLIFRANKMPEEWRRSILVPIFKNKED 53


>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
          Length = 1134

 Score = 52.8 bits (125), Expect(2) = 4e-07
 Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
 Frame = +2

Query: 116 CTNYP-------RKE*WERVTEQRLRK*ISLLKNQFSFMIGRSIMESIPLLRQLLQIFR 271
           CTNY          + WERV E RLR+  S+ KNQF FM GRS ME+I L+RQL+  +R
Sbjct: 387 CTNYRGIKLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMVRYR 445



 Score = 27.7 bits (60), Expect(2) = 4e-07
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 42  LTWLVKLFNIV-ETNEMPNKCISTLVVQTILEKND 143
           + WL KLFN++   N+MP +   +++V     K D
Sbjct: 349 IVWLTKLFNLIFRANKMPEEWRRSILVPIFKNKGD 383


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 48.5 bits (114), Expect(2) = 5e-07
 Identities = 24/43 (55%), Positives = 31/43 (72%)
 Frame = +2

Query: 143 WERVTEQRLRK*ISLLKNQFSFMIGRSIMESIPLLRQLLQIFR 271
           WERV E RLR+   +  NQF FM GRS ME+I LLR+L++ +R
Sbjct: 254 WERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYR 296



 Score = 31.6 bits (70), Expect(2) = 5e-07
 Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +3

Query: 39  GLTWLVKLFN-IVETNEMPNKCISTLVVQTILEKND 143
           G+TWL+ LFN I++T +MPN+  ++ +V     K D
Sbjct: 199 GITWLIDLFNRILKTKKMPNEWRTSPLVPIYKNKGD 234


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 48.5 bits (114), Expect(2) = 6e-07
 Identities = 24/43 (55%), Positives = 31/43 (72%)
 Frame = +2

Query: 143 WERVTEQRLRK*ISLLKNQFSFMIGRSIMESIPLLRQLLQIFR 271
           WERV E RLR+   +  NQF FM GRS ME+I LLR+L++ +R
Sbjct: 650 WERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYR 692



 Score = 31.2 bits (69), Expect(2) = 6e-07
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 39  GLTWLVKLFN-IVETNEMPNKCISTLVVQTILEKND 143
           G+TWL  LFN I++T +MPN+  ++ +V     K D
Sbjct: 595 GITWLTDLFNRILKTKKMPNEWRTSTLVPIYKNKGD 630


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