BLASTX nr result
ID: Anemarrhena21_contig00055092
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00055092
(1181 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB73912.1| polyprotein [Citrus sinensis] 314 e-120
gb|AFB73911.1| polyprotein [Citrus sinensis] 311 e-119
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 298 e-118
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 290 e-113
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 285 e-112
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 287 e-111
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 281 e-110
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 280 e-109
gb|ADG59810.1| gag-pol polyprotein [Fraxinus excelsior] 175 4e-75
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 157 2e-57
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 155 6e-57
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 143 1e-56
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 147 3e-56
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 140 3e-55
emb|CAN74198.1| hypothetical protein VITISV_005765 [Vitis vinifera] 144 4e-55
emb|CAN71109.1| hypothetical protein VITISV_001479 [Vitis vinifera] 144 4e-55
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 150 8e-55
emb|CAN69340.1| hypothetical protein VITISV_032634 [Vitis vinifera] 141 1e-54
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 149 6e-54
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 149 6e-54
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 314 bits (805), Expect(2) = e-120
Identities = 174/291 (59%), Positives = 201/291 (69%), Gaps = 8/291 (2%)
Frame = -2
Query: 859 MLRTASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAM 680
MLRTA L SFWAE KTA Y++++SPSTAI LKT MEMWTGKPA YS+LH FG PVY M
Sbjct: 599 MLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKPADYSYLHAFGCPVYVM 658
Query: 679 YNAQETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**H--- 509
YNAQE +KLDPKSRKC+FLGYADGVKGYRLWDP AHK++ISRDV+F +R+
Sbjct: 659 YNAQERTKLDPKSRKCIFLGYADGVKGYRLWDPTAHKIVISRDVIFVEDQLQRKDGDDGT 718
Query: 508 FKEKPETTTVQIEDQQEISNSSYVAPEHEEQEQVEFATPQVKRSTRERREPAWHSDYIME 329
KEK ET V +E+ E S+SS APEHEEQE VE P+V+RSTRERR P WHS+Y+ E
Sbjct: 719 VKEKSETVPVYVENNPENSDSSEAAPEHEEQEPVESEAPEVRRSTRERRPPTWHSEYVTE 778
Query: 328 RNVA*CLLTEVGEPSTFHEASKSSEAS---RRWQQCKKKLKLSKRTEHGILFHYH*EGRP 158
NVA CLLTE GEPSTFHEA S + + Q+ + L +K E L H GR
Sbjct: 779 INVAYCLLTEDGEPSTFHEALNSLDVALWMTAMQEEIEALHKNKTWELVPLPH----GRK 834
Query: 157 SKTNRSTRSSEMAMTKW--RYCARLVVKGLAQKEGIDFNEIFYPAVRLTTV 11
+ N+ + RY ARLVVKG AQKEGIDFNEIF P VRLTTV
Sbjct: 835 AIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTV 885
Score = 146 bits (368), Expect(2) = e-120
Identities = 70/107 (65%), Positives = 82/107 (76%)
Frame = -1
Query: 1181 QAPDLPLGGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTD 1002
++PD+ +GGA+Y V+FIDDYS+RCWVYP KA VELES KKIKCLRTD
Sbjct: 491 ESPDISMGGAKYMVTFIDDYSRRCWVYPIKKKSDVFPVFKEYKAWVELESGKKIKCLRTD 550
Query: 1001 NGGEYTGDEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTR 861
NGGEYT EF +FC+QEGI+RQFTVAYTPQ N +AERMNRTL E+ R
Sbjct: 551 NGGEYTDSEFLAFCKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIR 597
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 311 bits (796), Expect(2) = e-119
Identities = 167/288 (57%), Positives = 200/288 (69%), Gaps = 5/288 (1%)
Frame = -2
Query: 859 MLRTASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAM 680
MLRTA L SFWAE KTA Y++++SPSTAI LKT MEMWTGKPA YS+LH FG P+Y M
Sbjct: 599 MLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKPADYSYLHAFGCPMYVM 658
Query: 679 YNAQETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**H--- 509
YNAQE +KLD KSR+C+FLGYADGVKGYRLWDP AHK++ISRDV+F +R+
Sbjct: 659 YNAQERTKLDAKSRRCIFLGYADGVKGYRLWDPTAHKIVISRDVIFVEDQLQRKDGDDGT 718
Query: 508 FKEKPETTTVQIEDQQEISNSSYVAPEHEEQEQVEFATPQVKRSTRERREPAWHSDYIME 329
KEK ET V +E+ E S+SS APEHEEQE VE P+V+RSTRERR P WHS+Y+ E
Sbjct: 719 VKEKSETVPVYVENNPENSDSSEAAPEHEEQEPVESEAPEVRRSTRERRPPTWHSEYVTE 778
Query: 328 RNVA*CLLTEVGEPSTFHEASKSSEASRRWQQCKKKLKLSKRTEHGILFHYH*EGRPSKT 149
NVA CLLTE GEPSTFHEA SS+ + +++++ + + L GR +
Sbjct: 779 INVAYCLLTEDGEPSTFHEALNSSDVALWMTAMQEEIEALHKNKTWELVPLP-RGRKAIG 837
Query: 148 NRSTRSSEMAMTKW--RYCARLVVKGLAQKEGIDFNEIFYPAVRLTTV 11
N+ + RY ARLVVKG AQKEGIDFNEIF P VRLTTV
Sbjct: 838 NKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTV 885
Score = 145 bits (367), Expect(2) = e-119
Identities = 70/107 (65%), Positives = 82/107 (76%)
Frame = -1
Query: 1181 QAPDLPLGGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTD 1002
++PD+ +GGA+Y V+FIDDYS+RCWVYP KA VELES KKIKCLRTD
Sbjct: 491 ESPDISMGGAKYMVTFIDDYSRRCWVYPIKKKSDVFPVFKEYKAWVELESGKKIKCLRTD 550
Query: 1001 NGGEYTGDEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTR 861
NGGEYT EF +FC+QEGI+RQFTVAYTPQ N +AERMNRTL E+ R
Sbjct: 551 NGGEYTDGEFLAFCKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIR 597
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 298 bits (764), Expect(2) = e-118
Identities = 165/290 (56%), Positives = 199/290 (68%), Gaps = 7/290 (2%)
Frame = -2
Query: 859 MLRTASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAM 680
MLR A L KSFWAE + TA Y+++++PSTAI+LKTPMEMWTGKP YS+LH FGS VYAM
Sbjct: 589 MLRAAGLEKSFWAEAVNTACYLVNRAPSTAIELKTPMEMWTGKPVDYSNLHIFGSIVYAM 648
Query: 679 YNAQETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**H--- 509
YNAQE +KLDPKSRKC FLGYADGVKGYRLWDP AHKV+ISRDV+F +R
Sbjct: 649 YNAQEITKLDPKSRKCRFLGYADGVKGYRLWDPTAHKVVISRDVIFVEDRLQRGEVDDST 708
Query: 508 FKEKPETTTVQIEDQQEISNSSYVAPEHEEQEQVEFATPQVKRSTRERREPAWHSDYIME 329
KEKPETT +Q+E++ E +SS P HEE E P ++S RE+R P WHSDY+ME
Sbjct: 709 EKEKPETTQIQVEEEFE-QDSSEAEPAHEEPEPESSGAPTTRQSDREKRRPTWHSDYVME 767
Query: 328 RNVA*CLLTEVGEPSTFHEASKSSEASRRWQQCKKKLKLSKRTEHGILFHYH*EGRPSKT 149
NVA CLLTE GEPSTF EA SS+ S+ +++++ + L +GR
Sbjct: 768 GNVAYCLLTEDGEPSTFQEAINSSDVSQWTAAMQEEIEALHKNNTWDLVPLP-QGRKPIG 826
Query: 148 N----RSTRSSEMAMTKWRYCARLVVKGLAQKEGIDFNEIFYPAVRLTTV 11
N + R+ + + RY ARLVVKG AQKEGIDFNEIF P VRLTTV
Sbjct: 827 NKWVFKIKRNGDDQVE--RYRARLVVKGYAQKEGIDFNEIFSPVVRLTTV 874
Score = 156 bits (395), Expect(2) = e-118
Identities = 76/107 (71%), Positives = 84/107 (78%)
Frame = -1
Query: 1181 QAPDLPLGGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTD 1002
QAP LGGA+YFVSFIDDYS+RCWVYP KARVEL+S KKIKC RTD
Sbjct: 481 QAPVPSLGGAKYFVSFIDDYSRRCWVYPIKKKSDVFATFKAFKARVELDSGKKIKCFRTD 540
Query: 1001 NGGEYTGDEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTR 861
NGGEYT +EFD FC++EGIKRQFTVAYTPQ N +AERMNRTLLE+TR
Sbjct: 541 NGGEYTSEEFDDFCKKEGIKRQFTVAYTPQQNGVAERMNRTLLERTR 587
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 290 bits (743), Expect(2) = e-113
Identities = 156/285 (54%), Positives = 196/285 (68%), Gaps = 2/285 (0%)
Frame = -2
Query: 859 MLRTASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAM 680
ML+TA +AKSFWAE +KTA YVI++SPSTAIDLKTPMEMW GKP YS LH FG PVY M
Sbjct: 599 MLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVM 658
Query: 679 YNAQETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**HFKE 500
YN+QE +KLDPKSRKC+FLGYAD VKGYRLWDP A KV++SRDVVF + + + +
Sbjct: 659 YNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSKQKNDST 718
Query: 499 KPETTTVQIEDQQEISNSSYVAPEHEEQEQVEFATPQVKRSTRERREPAWHSDYIMERNV 320
ET VQ+E++ + S+SS P HEEQE + V+RSTR+ ++P+W SDY+M +
Sbjct: 719 SKETAIVQMEEKSKESDSSEAEPVHEEQEP-DDVNNGVRRSTRQTQKPSWQSDYVMTSHD 777
Query: 319 A*CLLTEVGEPSTFHEASKSSEASRRWQQCKKKLKLSKRTEHGILFHYH*EGRPSKTNRS 140
A CL+TE GEPSTFHEA S+AS+ ++++ R + L +GR + N+
Sbjct: 778 AYCLITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELP-KGRKAIGNKW 836
Query: 139 TRSSEMAMTKW--RYCARLVVKGLAQKEGIDFNEIFYPAVRLTTV 11
+ RY ARLVVKG AQKEGIDFNEIF P VRLTT+
Sbjct: 837 VYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTI 881
Score = 145 bits (367), Expect(2) = e-113
Identities = 71/107 (66%), Positives = 83/107 (77%)
Frame = -1
Query: 1181 QAPDLPLGGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTD 1002
++P+L LGGARYFVSFIDDYS+R WVYP KA++ELE+ KKIKCLRTD
Sbjct: 491 ESPELSLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETGKKIKCLRTD 550
Query: 1001 NGGEYTGDEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTR 861
NGGEY EF +FC+QEGI RQFTVA+TPQ N +AERMNRTLLE+TR
Sbjct: 551 NGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTR 597
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 285 bits (730), Expect(2) = e-112
Identities = 155/285 (54%), Positives = 193/285 (67%), Gaps = 2/285 (0%)
Frame = -2
Query: 859 MLRTASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAM 680
ML+TA +AKSFWAE KTA YVI++SPSTAIDLKTPMEMW GKP YS LH FG PVY M
Sbjct: 599 MLKTAGMAKSFWAEAAKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVM 658
Query: 679 YNAQETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**HFKE 500
YN+QE +KLDPKSRKC+FLGYAD VKGYRLWDP A KV++SRDVVF + + +
Sbjct: 659 YNSQEKTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDST 718
Query: 499 KPETTTVQIEDQQEISNSSYVAPEHEEQEQVEFATPQVKRSTRERREPAWHSDYIMERNV 320
ET VQ+E++ + S+SS HEEQE + V+RSTR+ ++P+W SDY+M +
Sbjct: 719 SKETAIVQMEEKSKESDSSEAESVHEEQEP-DDVNDGVRRSTRQTQKPSWQSDYVMTSHD 777
Query: 319 A*CLLTEVGEPSTFHEASKSSEASRRWQQCKKKLKLSKRTEHGILFHYH*EGRPSKTNRS 140
A CL+TE GEPSTFHEA S+AS+ ++++ R + L +GR + N+
Sbjct: 778 AYCLITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELP-KGRKAIGNKW 836
Query: 139 TRSSEMAMTKW--RYCARLVVKGLAQKEGIDFNEIFYPAVRLTTV 11
+ RY ARLVVKG AQKEGIDFNEIF P VRLTT+
Sbjct: 837 VYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTI 881
Score = 147 bits (372), Expect(2) = e-112
Identities = 71/107 (66%), Positives = 84/107 (78%)
Frame = -1
Query: 1181 QAPDLPLGGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTD 1002
++P++ LGGARYFVSFIDDYS+R WVYP KA++ELE+EKKIKCLRTD
Sbjct: 491 ESPEISLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETEKKIKCLRTD 550
Query: 1001 NGGEYTGDEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTR 861
NGGEY EF +FC+QEGI RQFTVA+TPQ N +AERMNRTLLE+TR
Sbjct: 551 NGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTR 597
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 287 bits (734), Expect(2) = e-111
Identities = 155/285 (54%), Positives = 194/285 (68%), Gaps = 2/285 (0%)
Frame = -2
Query: 859 MLRTASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAM 680
ML+TA +AKSFWAE +KTA YVI++SPSTAIDLKTPMEMW GKP YS LH FG PVY M
Sbjct: 599 MLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVM 658
Query: 679 YNAQETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**HFKE 500
YN+QE +KLDPKSRKC+FLGYAD VKGYRLWDP A KV++SRDVVF + + +
Sbjct: 659 YNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDST 718
Query: 499 KPETTTVQIEDQQEISNSSYVAPEHEEQEQVEFATPQVKRSTRERREPAWHSDYIMERNV 320
ET VQ+E++ + S+SS HEEQE + V+RSTR+ ++P+W SDY+M +
Sbjct: 719 SKETAIVQMEEKSKESDSSEAESVHEEQEP-DDVNDGVRRSTRQTQKPSWQSDYVMTSHD 777
Query: 319 A*CLLTEVGEPSTFHEASKSSEASRRWQQCKKKLKLSKRTEHGILFHYH*EGRPSKTNRS 140
A CL+TE GEPSTFHEA S+AS+ ++++ R + L +GR + N+
Sbjct: 778 AYCLITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELP-KGRKAIGNKW 836
Query: 139 TRSSEMAMTKW--RYCARLVVKGLAQKEGIDFNEIFYPAVRLTTV 11
+ RY ARLVVKG AQKEGIDFNEIF P VRLTT+
Sbjct: 837 VYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTI 881
Score = 145 bits (366), Expect(2) = e-111
Identities = 70/107 (65%), Positives = 83/107 (77%)
Frame = -1
Query: 1181 QAPDLPLGGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTD 1002
++P++ LGGARYFVSFIDDYS+R WVYP KA++ELE+ KKIKCLRTD
Sbjct: 491 ESPEISLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETRKKIKCLRTD 550
Query: 1001 NGGEYTGDEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTR 861
NGGEY EF +FC+QEGI RQFTVA+TPQ N +AERMNRTLLE+TR
Sbjct: 551 NGGEYIDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTR 597
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 281 bits (720), Expect(2) = e-110
Identities = 152/285 (53%), Positives = 193/285 (67%), Gaps = 2/285 (0%)
Frame = -2
Query: 859 MLRTASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAM 680
ML+TA +AKSFWAE +KTA YVI++SPST IDLKTPMEMW GKP YS LH FG PVY M
Sbjct: 599 MLKTAEMAKSFWAEAVKTACYVINRSPSTTIDLKTPMEMWKGKPVDYSSLHVFGCPVYVM 658
Query: 679 YNAQETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**HFKE 500
YN+QE +KLDPKSRKC+FLGYAD VKGYRLWDP A KV++SRDVVF + + +
Sbjct: 659 YNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDST 718
Query: 499 KPETTTVQIEDQQEISNSSYVAPEHEEQEQVEFATPQVKRSTRERREPAWHSDYIMERNV 320
ET +QIE++ + S+SS HEEQE + V+RSTR+ ++P+W SDY+M +
Sbjct: 719 FKETAILQIEEKSKESDSSEAESVHEEQEP-DDVNNGVRRSTRQTQKPSWQSDYVMTGHD 777
Query: 319 A*CLLTEVGEPSTFHEASKSSEASRRWQQCKKKLKLSKRTEHGILFHYH*EGRPSKTNRS 140
A CL+ E GEPSTFHEA S+AS+ ++++ ++ + L +GR + N+
Sbjct: 778 AYCLIAEEGEPSTFHEALNGSDASQWMTAIHEEMEALRKNKTWELVELP-KGRKAIGNKW 836
Query: 139 TRSSEMAMTKW--RYCARLVVKGLAQKEGIDFNEIFYPAVRLTTV 11
+ RY ARLVVKG AQKEGIDFNEIF P VRLTT+
Sbjct: 837 VYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTI 881
Score = 144 bits (364), Expect(2) = e-110
Identities = 71/107 (66%), Positives = 82/107 (76%)
Frame = -1
Query: 1181 QAPDLPLGGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTD 1002
++P L LGGARYFVSFIDDYS+R WVYP KA++ELE+ KKIKCLRTD
Sbjct: 491 ESPKLSLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETGKKIKCLRTD 550
Query: 1001 NGGEYTGDEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTR 861
NGGEY EF +FC+QEGI RQFTVA+TPQ N +AERMNRTLLE+TR
Sbjct: 551 NGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTR 597
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 280 bits (717), Expect(2) = e-109
Identities = 153/285 (53%), Positives = 190/285 (66%), Gaps = 2/285 (0%)
Frame = -2
Query: 859 MLRTASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAM 680
ML+TA LAKSFWAE KTA YVI++SPSTAI LKTPMEMW GKP YS L FG PVY M
Sbjct: 599 MLKTAGLAKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGKPGDYSSLRVFGCPVYVM 658
Query: 679 YNAQETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**HFKE 500
YN+QE +KLDPKSR+C FLGYAD VKGYRLWDP A K+ +SRDV+F + ++ +
Sbjct: 659 YNSQERTKLDPKSRRCTFLGYADNVKGYRLWDPTARKIFVSRDVIFVENELQKEQKNDGT 718
Query: 499 KPETTTVQIEDQQEISNSSYVAPEHEEQEQVEFATPQVKRSTRERREPAWHSDYIMERNV 320
ET TV+IE++ NS PEHEEQE E + +R+TR+ R+P+WHS+Y+M +
Sbjct: 719 TKETATVEIEEKSGEENSE-AEPEHEEQEPNEVNDAEPRRTTRQIRKPSWHSEYVMASHD 777
Query: 319 A*CLLTEVGEPSTFHEASKSSEASRRWQQCKKKLKLSKRTEHGILFHYH*EGRPSKTNRS 140
A CLL+E GEPSTFHEA S+AS +++++ R L +GR + N+
Sbjct: 778 AYCLLSEDGEPSTFHEAVNGSDASLWMAAMQEEIEALHRNNTWELVELP-KGRKAIGNKW 836
Query: 139 TRSSEMAMTKW--RYCARLVVKGLAQKEGIDFNEIFYPAVRLTTV 11
+ RY ARLVVKG AQKEGIDFNEIF P VRLTT+
Sbjct: 837 VFKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTI 881
Score = 143 bits (360), Expect(2) = e-109
Identities = 68/107 (63%), Positives = 84/107 (78%)
Frame = -1
Query: 1181 QAPDLPLGGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTD 1002
++P++ +GGA+YFVSFIDDYS+R WVYP KA+VELE+ K+IKCLRTD
Sbjct: 491 ESPEVSIGGAKYFVSFIDDYSRRLWVYPIKKKSGVYSVFKEFKAQVELETGKRIKCLRTD 550
Query: 1001 NGGEYTGDEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTR 861
NGGEYT +F +FC+QEGI RQFTVA+TPQ N +AERMNRTLLE+TR
Sbjct: 551 NGGEYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAERMNRTLLERTR 597
>gb|ADG59810.1| gag-pol polyprotein [Fraxinus excelsior]
Length = 188
Score = 175 bits (444), Expect(2) = 4e-75
Identities = 80/95 (84%), Positives = 85/95 (89%)
Frame = -2
Query: 859 MLRTASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAM 680
MLRT + KSFWAE +KTA YVI+QSPSTAIDLKTP+EMWTGKP YSHLHTFGSPVY M
Sbjct: 94 MLRTTGMTKSFWAEAVKTACYVINQSPSTAIDLKTPIEMWTGKPTNYSHLHTFGSPVYVM 153
Query: 679 YNAQETSKLDPKSRKCVFLGYADGVKGYRLWDPIA 575
YNAQETSKLDPKSRKC+FLG ADGVKGYRLWDP A
Sbjct: 154 YNAQETSKLDPKSRKCIFLGCADGVKGYRLWDPTA 188
Score = 135 bits (340), Expect(2) = 4e-75
Identities = 67/92 (72%), Positives = 70/92 (76%)
Frame = -1
Query: 1136 FIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTDNGGEYTGDEFDSFCQ 957
FIDDYS+RCWVYP K VE ESEKKIKCLRTDN GEYTG EFDSFCQ
Sbjct: 1 FIDDYSRRCWVYPIKRMADGFPVFKIFKVWVEFESEKKIKCLRTDNEGEYTGVEFDSFCQ 60
Query: 956 QEGIKRQFTVAYTPQHNEIAERMNRTLLEQTR 861
QEGIKRQ TVAYTPQ N +AERMNRTLLE+TR
Sbjct: 61 QEGIKRQLTVAYTPQQNGVAERMNRTLLERTR 92
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 157 bits (396), Expect(2) = 2e-57
Identities = 113/311 (36%), Positives = 156/311 (50%), Gaps = 28/311 (9%)
Frame = -2
Query: 859 MLRTASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAM 680
ML ASL K FWAE + TA Y+I++SPS AID KTP+E+W+G PA YS L FG YA
Sbjct: 519 MLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAH 578
Query: 679 YNAQETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**HFKE 500
+ KL+P+ KC+FLGY GVKGY+LW P KV+ISR+VVF S +
Sbjct: 579 V---DNGKLEPRVIKCIFLGYLSGVKGYKLWCPETKKVVISRNVVFHESIM------LHD 629
Query: 499 KPETTTVQIEDQQEIS------NSSYVAPEHE-----------EQEQVEFATPQVKRS-- 377
KP +T V +E Q+++S SS APE E E KRS
Sbjct: 630 KP-STNVPVESQEKVSVQVEHLISSGHAPEKEDVAINQDAPVIEDSDSSIVQQSPKRSIA 688
Query: 376 -TRERREPAWHSDYIMERNVA*CLLTEV------GEPSTFHEASKSSEASRRWQQCKKKL 218
R +R YI E N+ L+ EPST+ +A S + +R ++
Sbjct: 689 KDRPKRNTKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEM 748
Query: 217 KLSKRTEHGILFHYH*EGRPSKTNRSTRSSE--MAMTKWRYCARLVVKGLAQKEGIDFNE 44
+ ++ L E +P + + E + RY ARLV KG +Q GIDFN+
Sbjct: 749 ESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFND 808
Query: 43 IFYPAVRLTTV 11
+F P V+ +++
Sbjct: 809 VFSPVVKHSSI 819
Score = 94.7 bits (234), Expect(2) = 2e-57
Identities = 45/100 (45%), Positives = 62/100 (62%)
Frame = -1
Query: 1160 GGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTDNGGEYTG 981
GGARY ++ +DDYS++ W Y K VE ++E+K+K LRTDNG E
Sbjct: 418 GGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMELCS 477
Query: 980 DEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTR 861
F S+C+ EGI R +TV +TPQ N +AERMNRT++ + R
Sbjct: 478 KIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKAR 517
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 155 bits (392), Expect(2) = 6e-57
Identities = 111/311 (35%), Positives = 156/311 (50%), Gaps = 28/311 (9%)
Frame = -2
Query: 859 MLRTASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAM 680
+L A L K FWAE + TA Y+I++SPS AID KTP+E+W+G PA YS L FG YA
Sbjct: 817 LLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAH 876
Query: 679 YNAQETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**HFKE 500
+ KL+P++ KC+FLGY GVKGY+LW P KV+ISR+VVF S +
Sbjct: 877 V---DNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVM------LHD 927
Query: 499 KPETTTVQIEDQQEIS------NSSYVAPEHE-----------EQEQVEFATPQVKRS-- 377
KP +T V +E Q++ S SS APE E E KRS
Sbjct: 928 KP-STNVPVESQEKASVQVEHLISSGHAPEKEDVAINQDEPVIEDSNSSIVQQSPKRSIA 986
Query: 376 -TRERREPAWHSDYIMERNVA*CLLTEV------GEPSTFHEASKSSEASRRWQQCKKKL 218
R +R YI E N+ L+ EPST+ EA S + +R ++
Sbjct: 987 KDRPKRNIKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEM 1046
Query: 217 KLSKRTEHGILFHYH*EGRPSKTNRSTRSSE--MAMTKWRYCARLVVKGLAQKEGIDFNE 44
+ ++ L E +P + + E + + RY ARL+ KG +Q GIDFN+
Sbjct: 1047 ESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGYSQIPGIDFND 1106
Query: 43 IFYPAVRLTTV 11
+F P V+ +++
Sbjct: 1107 VFSPVVKHSSI 1117
Score = 94.7 bits (234), Expect(2) = 6e-57
Identities = 44/100 (44%), Positives = 62/100 (62%)
Frame = -1
Query: 1160 GGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTDNGGEYTG 981
GG RY ++ +DDYS++ W Y K VE ++E+K+K LRTDNG E+
Sbjct: 716 GGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCS 775
Query: 980 DEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTR 861
F S+C+ EGI R +TV +TPQ N +AERMNRT++ + R
Sbjct: 776 KIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKAR 815
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 143 bits (361), Expect(2) = 1e-56
Identities = 101/314 (32%), Positives = 146/314 (46%), Gaps = 35/314 (11%)
Frame = -2
Query: 847 ASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAMYNAQ 668
A L + FWAE A Y+I++SPS AI+ K E+W+GKP YS+L FG YA
Sbjct: 575 AGLPEEFWAEAANHACYLINRSPSRAINFKCAEEVWSGKPVDYSNLRVFGCSAYAHIPKD 634
Query: 667 ETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**HFKEKPET 488
E +KL+PKS +C+F+G+ GVKGY+LWD + K +ISRDVVF + KP
Sbjct: 635 ERTKLEPKSLECLFIGFEKGVKGYKLWDIVNEKKVISRDVVF---DEREAISISLAKPSV 691
Query: 487 TTVQIEDQQEISNSSYVAPEHEEQEQVEFATPQVKRS----------------------- 377
+ + +Q + VA E E +Q QV++S
Sbjct: 692 ADSEAQVEQNEQGNDEVAIEEPEHQQQPTVMAQVEQSPQRGQNSPIPQAPESFKRSIALD 751
Query: 376 -TRERREPAWHSDYIMERNVA*CLLTEVGEPSTFHEASKSSEASRRWQQCKKKLKLSKRT 200
+ R+P + E +V+ L G+P+T+ +A +S E S W + T
Sbjct: 752 KPKRNRKPIQRFGFEPEEDVSRALSISQGDPTTYEDAIESVE-SAGW--------IGAMT 802
Query: 199 EHGILFHYH--*EGRPSKTNRSTRSSEMAMTKWR---------YCARLVVKGLAQKEGID 53
E H + E P R + K Y ARLV KG +QKEG+D
Sbjct: 803 EEMESLHKNSVWELVPKPKERKLVGCKWVFRKKEGIHEDDAITYKARLVAKGYSQKEGVD 862
Query: 52 FNEIFYPAVRLTTV 11
++EIF P V+ T++
Sbjct: 863 YDEIFSPVVKHTSI 876
Score = 105 bits (262), Expect(2) = 1e-56
Identities = 51/103 (49%), Positives = 68/103 (66%)
Frame = -1
Query: 1160 GGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTDNGGEYTG 981
GGARYFVSFIDD+S++ W++ KA V ++ +KIKCLR+DNGGEY
Sbjct: 470 GGARYFVSFIDDFSRKVWIFFMKTKNEVFTKFKEWKAEVGNQTGRKIKCLRSDNGGEYRD 529
Query: 980 DEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTRDVK 852
+F C+ EGI R FTV +PQ N +AERMNRTL+E+ R ++
Sbjct: 530 KKFLQLCKDEGITRHFTVKKSPQQNGVAERMNRTLMEKERSMR 572
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 147 bits (371), Expect(2) = 3e-56
Identities = 111/306 (36%), Positives = 158/306 (51%), Gaps = 23/306 (7%)
Frame = -2
Query: 859 MLRTASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAM 680
ML A L + FWAE + TA Y+I++ P T I KTPMEMW+GK A YS+L FG Y
Sbjct: 588 MLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAY-- 645
Query: 679 YNAQETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**HFKE 500
Y+ E KL+P+++K VF+GY DGVKG+R+W P +VI+SR+VVF S R
Sbjct: 646 YHVSE-GKLEPRAKKGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESPLLRT----IV 700
Query: 499 KPETTT------VQIEDQQEISNSSYVAPEHEEQE-QVEFATPQVKRS--------TRER 365
KP TT+ Q+E Q + S PE E+QE Q E P+ S R R
Sbjct: 701 KPTTTSETGSLDKQVEFQVIQNESDLKEPEEEDQEPQTETDIPESMPSDIHQSIAQDRPR 760
Query: 364 REPAW-HSDYIMERNVA*CLL----TEVGEPSTFHEASKSSEASRRWQQCKKKLKLSKRT 200
R + Y E V L + EPST+ EA SS++ + + +++ +
Sbjct: 761 RVGVRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKN 820
Query: 199 EHGILFHYH*EGRPSKTNRSTRSSEMAMTK---WRYCARLVVKGLAQKEGIDFNEIFYPA 29
+ L GR T + + ++ +Y AR+V +G Q+EG+D+NEIF P
Sbjct: 821 QTWDLV-IQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPV 879
Query: 28 VRLTTV 11
VR T++
Sbjct: 880 VRHTSI 885
Score = 100 bits (249), Expect(2) = 3e-56
Identities = 53/101 (52%), Positives = 63/101 (62%)
Frame = -1
Query: 1163 LGGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTDNGGEYT 984
LGG R+FVS IDDYS+ WVY K +E ++ KKIK LRTDNG E+
Sbjct: 486 LGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFC 545
Query: 983 GDEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTR 861
EFD FC+ EGI R TV TPQ N +AERMN+TLLE+ R
Sbjct: 546 WSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERAR 586
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 140 bits (353), Expect(2) = 3e-55
Identities = 107/325 (32%), Positives = 157/325 (48%), Gaps = 42/325 (12%)
Frame = -2
Query: 859 MLRTASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAM 680
ML + L +SFWAE + TA Y++++SPS+AI KTP E+W GKPA Y +L FG P Y
Sbjct: 600 MLINSKLPRSFWAEAVNTASYLVNRSPSSAIGFKTPEELWNGKPANYQNLRVFGCPAYLH 659
Query: 679 YNAQETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**S-SRKRR**H-- 509
N KL+ ++ K VF+GY DGVKGY++W K I+SRDVVF S K H
Sbjct: 660 IN---QGKLEARALKGVFVGYPDGVKGYKIWCKDQGKCIVSRDVVFHESVLLKESAEHDA 716
Query: 508 -FKEKP--------ETTTVQIE-------DQQEISNSSYVAPEHEEQE-----QVEFATP 392
++ P ET+ V +E +++ S+ E EE E Q +
Sbjct: 717 GLQDNPAANKRSGSETSKVNVELLTDKSSEKEAASDDERATAESEEHEVSELPQADLQNY 776
Query: 391 QVKRSTRERREPAWHSDYIMERNVA*CLL----TEVGEPSTFHEASKSSEASRRWQQCKK 224
Q+ R R RRE Y +A LL + EP+ F EA +S + + +
Sbjct: 777 QLARD-RVRREVRAPVRYGYADLIAYALLCADEVTIEEPANFSEAMESVHCDKWLEAMQD 835
Query: 223 KLKLSKRTEHGILFHYH*EGRPSKTNRSTRSSEMAMTKW--------------RYCARLV 86
+++ +R + L P+ N+ + KW +Y ARLV
Sbjct: 836 EMESLQRNQTWTLI-------PNPGNK-----RLINCKWIFKRNEGIPDVEPPKYKARLV 883
Query: 85 VKGLAQKEGIDFNEIFYPAVRLTTV 11
+G Q+EG+DFNEIF P V+ +++
Sbjct: 884 ARGFTQREGVDFNEIFSPVVKHSSI 908
Score = 104 bits (259), Expect(2) = 3e-55
Identities = 50/101 (49%), Positives = 67/101 (66%)
Frame = -1
Query: 1163 LGGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTDNGGEYT 984
L G RYF+S IDDYS++ W+Y K+ VE +S+ K+KCLRTDNG E+
Sbjct: 498 LSGGRYFMSLIDDYSRKVWIYILKIKDQALEKFKVWKSLVENQSDFKLKCLRTDNGLEFC 557
Query: 983 GDEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTR 861
F+ +CQ+ GIKR TV +TPQ N +AERMNRTL+++TR
Sbjct: 558 SKVFEEYCQKHGIKRHKTVRFTPQQNGLAERMNRTLVDKTR 598
>emb|CAN74198.1| hypothetical protein VITISV_005765 [Vitis vinifera]
Length = 1261
Score = 144 bits (364), Expect(2) = 4e-55
Identities = 101/295 (34%), Positives = 149/295 (50%), Gaps = 16/295 (5%)
Frame = -2
Query: 847 ASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAMYNAQ 668
A L K+FWA+ + TA Y+I++ PS ++ + P E+W+GK +SHL FG Y ++
Sbjct: 557 AGLPKTFWADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSD 616
Query: 667 ETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**HFKEKPET 488
SKLD KS+ C F+GY D GYR WD K+I SR+V+F +K++
Sbjct: 617 ARSKLDAKSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIF------NEQVMYKDRSTV 670
Query: 487 TTVQIEDQQ---------EISNSSYVAPEHEEQE----QVEFATP--QVKRSTRERREPA 353
T+ E Q E++ S+ E++E QV+ +TP +V+RS+R R P
Sbjct: 671 TSDVTEIDQKKSEFVNLDELTESTVQKGGEEDKENVNSQVDLSTPIVEVRRSSRNTRPPQ 730
Query: 352 WHSDYIMERNVA*CLLTEVGEPSTFHEASKSSEASRRWQQCKKKLKLSKRTEHGILFHYH 173
+S + LLT+ GEP + EA + E S +W+ K S
Sbjct: 731 RYSPVLNY-----LLLTDGGEPECYDEALQ-DENSSKWELAMKDEMDSLLGNQTWZLTEL 784
Query: 172 *EGRPSKTNRST-RSSEMAMTKWRYCARLVVKGLAQKEGIDFNEIFYPAVRLTTV 11
G+ + N+ R RY ARLVVKG QKEGID+ EIF P V+++T+
Sbjct: 785 PVGKKALHNKWVYRIKNEHDGSKRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTI 839
Score = 99.4 bits (246), Expect(2) = 4e-55
Identities = 48/109 (44%), Positives = 68/109 (62%)
Frame = -1
Query: 1178 APDLPLGGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTDN 999
+P LGG+RY+++FI+D S++ WVY KA VE E+ K+KCLR+DN
Sbjct: 446 SPVASLGGSRYYITFINDSSRKVWVYFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDN 505
Query: 998 GGEYTGDEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTRDVK 852
GGEY F +C +GI+ + T+ TPQ N +AERMNRTL E+ R ++
Sbjct: 506 GGEYIDGGFSEYCXAQGIRMEKTIPGTPQQNGVAERMNRTLNERARSMR 554
>emb|CAN71109.1| hypothetical protein VITISV_001479 [Vitis vinifera]
Length = 1246
Score = 144 bits (364), Expect(2) = 4e-55
Identities = 101/295 (34%), Positives = 149/295 (50%), Gaps = 16/295 (5%)
Frame = -2
Query: 847 ASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAMYNAQ 668
A L K+FWA+ + TA Y+I++ PS ++ + P E+W+GK +SHL FG Y ++
Sbjct: 566 AGLPKTFWADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSD 625
Query: 667 ETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**HFKEKPET 488
SKLD KS+ C F+GY D GYR WD K+I SR+V+F +K++
Sbjct: 626 ARSKLDAKSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIF------NEQVMYKDRSTV 679
Query: 487 TTVQIEDQQ---------EISNSSYVAPEHEEQE----QVEFATP--QVKRSTRERREPA 353
T+ E Q E++ S+ E++E QV+ +TP +V+RS+R R P
Sbjct: 680 TSDVTEIDQKKSEFVNLDELTESTVQKGGEEDKENVNSQVDLSTPVVEVRRSSRNTRPPQ 739
Query: 352 WHSDYIMERNVA*CLLTEVGEPSTFHEASKSSEASRRWQQCKKKLKLSKRTEHGILFHYH 173
+S + LLT+ GEP + EA + E S +W+ K S
Sbjct: 740 RYSPVLNY-----LLLTDGGEPECYDEALQ-DENSSKWELAMKDEMDSLLGNQTWELTEL 793
Query: 172 *EGRPSKTNRST-RSSEMAMTKWRYCARLVVKGLAQKEGIDFNEIFYPAVRLTTV 11
G+ + N+ R RY ARLVVKG QKEGID+ EIF P V+++T+
Sbjct: 794 PVGKKALHNKWVYRIKNEHDGSKRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTI 848
Score = 99.4 bits (246), Expect(2) = 4e-55
Identities = 48/109 (44%), Positives = 67/109 (61%)
Frame = -1
Query: 1178 APDLPLGGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTDN 999
+P LGG+RY+++FIDD S++ WVY K VE E+ K+KCLR+DN
Sbjct: 455 SPVASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKXMVETETGLKVKCLRSDN 514
Query: 998 GGEYTGDEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTRDVK 852
GGEY F +C +GI+ + T+ TPQ N +AERMNRTL E+ R ++
Sbjct: 515 GGEYIDGGFSEYCAAQGIRMEKTIPGTPQQNGVAERMNRTLNERARSMR 563
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 150 bits (378), Expect(2) = 8e-55
Identities = 110/311 (35%), Positives = 153/311 (49%), Gaps = 28/311 (9%)
Frame = -2
Query: 859 MLRTASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAM 680
ML A L K FWAE + TA Y+I++SP AID KTP+E+W+G P YS L FG YA
Sbjct: 582 MLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIEVWSGSPTNYSDLRVFGCTAYAH 641
Query: 679 YNAQETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**HFKE 500
+ KL+P++ KC+FLGYA GVKGY+LW P KV+ISR+VVF S +
Sbjct: 642 V---DNGKLEPRAIKCIFLGYASGVKGYKLWCPETKKVVISRNVVFHESV------ILHD 692
Query: 499 KPETTTVQIEDQQEIS------NSSYVAPEHE-----------EQEQVEFATPQVKRS-- 377
KP +T V +E Q++ S SS APE E E KRS
Sbjct: 693 KP-STNVPVESQEKASVQVEHLISSGHAPEKEDVAINQDAPVIEDSDSSIVHQSPKRSIA 751
Query: 376 -TRERREPAWHSDYIMERNVA*CLLTEV------GEPSTFHEASKSSEASRRWQQCKKKL 218
+ +R YI E + L+ EPST+ EA S + +R ++
Sbjct: 752 KDKPKRNIKPPRRYIEEAKIVAYALSVAEKIEGNAEPSTYSEAIVSDDCNRWITAMHDEM 811
Query: 217 KLSKRTEHGILFHYH*EGRPSKTNRSTRSSE--MAMTKWRYCARLVVKGLAQKEGIDFNE 44
+ ++ L E +P + + E + RY ARLV KG +Q GIDFN+
Sbjct: 812 ESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFND 871
Query: 43 IFYPAVRLTTV 11
+F P V+ +++
Sbjct: 872 VFSPVVKHSSI 882
Score = 93.2 bits (230), Expect(2) = 8e-55
Identities = 43/100 (43%), Positives = 62/100 (62%)
Frame = -1
Query: 1160 GGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTDNGGEYTG 981
GGARY ++ +DDYS++ W Y K VE ++E+K+K LRTDNG E+
Sbjct: 481 GGARYMMTIVDDYSRKVWPYFLKHKYQAFDGFKEWKTMVERQTERKVKILRTDNGMEFCS 540
Query: 980 DEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTR 861
F S+C+ EGI +T +TPQ N++AERMNRT++ + R
Sbjct: 541 KIFKSYCKSEGIVCHYTAPHTPQQNDVAERMNRTIISKAR 580
>emb|CAN69340.1| hypothetical protein VITISV_032634 [Vitis vinifera]
Length = 1298
Score = 141 bits (355), Expect(2) = 1e-54
Identities = 100/295 (33%), Positives = 149/295 (50%), Gaps = 16/295 (5%)
Frame = -2
Query: 847 ASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAMYNAQ 668
A L K+FWA+ + TA Y+I++ PS ++ + P E+W+GK +SHL FG Y ++
Sbjct: 594 AGLPKTFWADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSD 653
Query: 667 ETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**HFKEKPET 488
SKLD KS+ C F+GY D GYR WD K+I SR+V+F +K++
Sbjct: 654 ARSKLDAKSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIF------NEQVMYKDRLTV 707
Query: 487 TTVQIEDQQ---------EISNSSYVAPEHEEQE----QVEFATP--QVKRSTRERREPA 353
T+ E Q E++ S+ E++E +V+ TP +V+RS+R R P
Sbjct: 708 TSXVTEIDQKKSEFVNLDELTESTVQKRGEEDKENVNSKVDLRTPVVEVRRSSRNIRPPQ 767
Query: 352 WHSDYIMERNVA*CLLTEVGEPSTFHEASKSSEASRRWQQCKKKLKLSKRTEHGILFHYH 173
+S + LLT+ GEP ++EA + E S +W+ K S
Sbjct: 768 RYSPVLNY-----LLLTDGGEPECYNEALQ-DENSSKWELAMKDEMDSLLGNQTWELTEL 821
Query: 172 *EGRPSKTNRST-RSSEMAMTKWRYCARLVVKGLAQKEGIDFNEIFYPAVRLTTV 11
G+ + N+ R RY ARLVVKG QKEGID+ EIF P V+++T+
Sbjct: 822 PVGKKALHNKWVYRIKNEHDGSKRYKARLVVKGFQQKEGIDYIEIFSPVVKMSTI 876
Score = 101 bits (251), Expect(2) = 1e-54
Identities = 49/109 (44%), Positives = 68/109 (62%)
Frame = -1
Query: 1178 APDLPLGGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTDN 999
+P LGG+RY+++FIDD S++ WVY KA VE E+ K+KCLR+DN
Sbjct: 483 SPVASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDN 542
Query: 998 GGEYTGDEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTRDVK 852
GGEY F +C +GI+ + T+ TPQ N +AERMNRTL E+ R ++
Sbjct: 543 GGEYIDGGFSEYCAAQGIRMEKTIPGTPQQNGVAERMNRTLNERARSMR 591
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 149 bits (375), Expect(2) = 6e-54
Identities = 109/311 (35%), Positives = 152/311 (48%), Gaps = 28/311 (9%)
Frame = -2
Query: 859 MLRTASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAM 680
ML A L K FWAE + T Y+I++SPS A D KTP+E+W+G PA YS L FG YA
Sbjct: 645 MLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPANYSDLRVFGCTAYAH 704
Query: 679 YNAQETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**HFKE 500
+ KL+P++ KC+FLGY GVKGY+LW P KV+ISR+VVF S +
Sbjct: 705 V---DNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESV------ILHD 755
Query: 499 KPETTTVQIEDQQEIS------NSSYVAPEHE-----------EQEQVEFATPQVKRS-- 377
KP +T V +E Q++ S SS APE E E KRS
Sbjct: 756 KP-STNVPVESQEKASVQVEHLISSGHAPEKENVAINQDAPVIEDSDSSIVQQSSKRSIA 814
Query: 376 -TRERREPAWHSDYIMERNVA*CLLTEV------GEPSTFHEASKSSEASRRWQQCKKKL 218
+ +R YI E N+ L+ EPST+ EA S + +R ++
Sbjct: 815 KDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEM 874
Query: 217 KLSKRTEHGILFHYH*EGRPSKTNRSTRSSE--MAMTKWRYCARLVVKGLAQKEGIDFNE 44
+ K+ E +P + + E + RY ARLV KG +Q GIDFN+
Sbjct: 875 ESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFND 934
Query: 43 IFYPAVRLTTV 11
+F P ++ +++
Sbjct: 935 VFSPIMKHSSI 945
Score = 91.3 bits (225), Expect(2) = 6e-54
Identities = 43/100 (43%), Positives = 60/100 (60%)
Frame = -1
Query: 1160 GGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTDNGGEYTG 981
GGARY ++ +DDYS++ W Y K VE ++EKK+K LRTDNG E+
Sbjct: 544 GGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCS 603
Query: 980 DEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTR 861
F S+C+ EGI +TV +TPQ N +AERMN ++ + R
Sbjct: 604 KIFKSYCKSEGIVHHYTVPHTPQQNGVAERMNMAIISKAR 643
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 149 bits (375), Expect(2) = 6e-54
Identities = 109/311 (35%), Positives = 152/311 (48%), Gaps = 28/311 (9%)
Frame = -2
Query: 859 MLRTASLAKSFWAEVIKTAYYVIDQSPSTAIDLKTPMEMWTGKPAGYSHLHTFGSPVYAM 680
ML A L K FWAE + T Y+I++SPS A D KTP+E+W+G PA YS L FG YA
Sbjct: 645 MLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPANYSDLRVFGCTAYAH 704
Query: 679 YNAQETSKLDPKSRKCVFLGYADGVKGYRLWDPIAHKVIISRDVVF**SSRKRR**HFKE 500
+ KL+P++ KC+FLGY GVKGY+LW P KV+ISR+VVF S +
Sbjct: 705 V---DNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESV------ILHD 755
Query: 499 KPETTTVQIEDQQEIS------NSSYVAPEHE-----------EQEQVEFATPQVKRS-- 377
KP +T V +E Q++ S SS APE E E KRS
Sbjct: 756 KP-STNVPVESQEKASVQVEHLISSGHAPEKENVAINQDAPVIEDSDSSIVQQSSKRSIA 814
Query: 376 -TRERREPAWHSDYIMERNVA*CLLTEV------GEPSTFHEASKSSEASRRWQQCKKKL 218
+ +R YI E N+ L+ EPST+ EA S + +R ++
Sbjct: 815 KDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEM 874
Query: 217 KLSKRTEHGILFHYH*EGRPSKTNRSTRSSE--MAMTKWRYCARLVVKGLAQKEGIDFNE 44
+ K+ E +P + + E + RY ARLV KG +Q GIDFN+
Sbjct: 875 ESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFND 934
Query: 43 IFYPAVRLTTV 11
+F P ++ +++
Sbjct: 935 VFSPIMKHSSI 945
Score = 91.3 bits (225), Expect(2) = 6e-54
Identities = 43/100 (43%), Positives = 60/100 (60%)
Frame = -1
Query: 1160 GGARYFVSFIDDYSKRCWVYPXXXXXXXXXXXXXXKARVELESEKKIKCLRTDNGGEYTG 981
GGARY ++ +DDYS++ W Y K VE ++EKK+K LRTDNG E+
Sbjct: 544 GGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCS 603
Query: 980 DEFDSFCQQEGIKRQFTVAYTPQHNEIAERMNRTLLEQTR 861
F S+C+ EGI +TV +TPQ N +AERMN ++ + R
Sbjct: 604 KIFKSYCKSEGIVHHYTVPHTPQQNGVAERMNMAIISKAR 643