BLASTX nr result

ID: Anemarrhena21_contig00054114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00054114
         (230 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28538.2| RNA-directed DNA polymerase , putative [Medicago ...    48   9e-07
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    48   2e-06
ref|XP_011470534.1| PREDICTED: uncharacterized protein LOC105353...    47   7e-06

>gb|ABD28538.2| RNA-directed DNA polymerase , putative [Medicago truncatula]
           gi|124360719|gb|ABD33252.2| RNA-directed DNA polymerase
           , putative [Medicago truncatula]
          Length = 173

 Score = 47.8 bits (112), Expect(2) = 9e-07
 Identities = 20/40 (50%), Positives = 29/40 (72%)
 Frame = -3

Query: 201 QFAAWKGKCLSMAGRIELVKSVIQGMMVYTMMVYKCSPKI 82
           + A WK   LS+AGR++LVKS +Q M+++TM +Y C  KI
Sbjct: 88  KIANWKASLLSIAGRVQLVKSDVQSMLLHTMSIYSCPIKI 127



 Score = 31.6 bits (70), Expect(2) = 9e-07
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -2

Query: 103 VQMFSKNFIYTGDGKKRALTTENWKIAFKPLEEG 2
           ++ + KNFI++GD  KR + T  WK  +   +EG
Sbjct: 131 MEKWIKNFIWSGDVTKRKMVTVAWKKIYAAYDEG 164


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 48.1 bits (113), Expect(2) = 2e-06
 Identities = 22/40 (55%), Positives = 29/40 (72%)
 Frame = -3

Query: 201 QFAAWKGKCLSMAGRIELVKSVIQGMMVYTMMVYKCSPKI 82
           + A WK   LS+AGRI+LVKSV+Q M+V+TM +Y    KI
Sbjct: 521 KLAKWKASLLSIAGRIQLVKSVVQSMLVHTMSIYSWPIKI 560



 Score = 29.6 bits (65), Expect(2) = 2e-06
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 103 VQMFSKNFIYTGDGKKRALTTENWKIAFKPLEEG 2
           ++ + KNFI++GD  KR + T  W+      EEG
Sbjct: 564 MEKWIKNFIWSGDVTKRKMVTVAWRKICADYEEG 597


>ref|XP_011470534.1| PREDICTED: uncharacterized protein LOC105353242 [Fragaria vesca
           subsp. vesca]
          Length = 1179

 Score = 47.4 bits (111), Expect(2) = 7e-06
 Identities = 18/35 (51%), Positives = 29/35 (82%)
 Frame = -3

Query: 201 QFAAWKGKCLSMAGRIELVKSVIQGMMVYTMMVYK 97
           +F++WKG  LSMAGR++L+KSV+  M+VY+  +Y+
Sbjct: 752 RFSSWKGSLLSMAGRLQLIKSVMASMVVYSFQIYE 786



 Score = 28.9 bits (63), Expect(2) = 7e-06
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = -2

Query: 103 VQMFSKNFIYTGDGKKRALTTENWKIAFKPLEEG 2
           ++++ +NF+++G   KR +    WK    P++EG
Sbjct: 795 LEVWCRNFLWSGSIDKRGVPLVAWKTCCAPMDEG 828


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