BLASTX nr result

ID: Anemarrhena21_contig00053582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00053582
         (505 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010669336.1| PREDICTED: copia protein isoform X2 [Beta vu...    83   6e-14
ref|XP_010669333.1| PREDICTED: copia protein isoform X1 [Beta vu...    83   6e-14

>ref|XP_010669336.1| PREDICTED: copia protein isoform X2 [Beta vulgaris subsp. vulgaris]
          Length = 953

 Score = 83.2 bits (204), Expect = 6e-14
 Identities = 63/168 (37%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
 Frame = -2

Query: 504 GYKCYDLSGRKIIISQHVVFDETQFPFAKIHTSTAITYDFVNDRLHP-LLHRYLLNQSVP 328
           GYKCYDLS  KII+S+HV+FDETQFPFAK+H+ T+ TY F++D   P L H Y+ +    
Sbjct: 293 GYKCYDLSSNKIILSRHVIFDETQFPFAKLHSPTSSTYSFLDDAPSPYLTHHYMTS---- 348

Query: 327 VR*EPELDAITPSPVXXXXXXXXXXXXXXXXXXXXXQLKTHSQVAHRST-PSSTAPRMST 151
               P L   TPS                       QL + S    RS  P ++ P +S 
Sbjct: 349 ---GPSLQPTTPS----LHSTACGPRSPSHDPATGSQLPSSSPSGSRSAGPPTSQPNLSP 401

Query: 150 IR-----------PAQVSPSPFQNQTG-QPTRT-MATRSMHGIFKAQT 46
            R           P  +S  P  + T   PTR    TRS  GIFK +T
Sbjct: 402 PRALSPDLGQQPTPESLSSPPTTSPTSPPPTRPGPTTRSQRGIFKPKT 449


>ref|XP_010669333.1| PREDICTED: copia protein isoform X1 [Beta vulgaris subsp. vulgaris]
           gi|731317714|ref|XP_010669334.1| PREDICTED: copia
           protein isoform X1 [Beta vulgaris subsp. vulgaris]
           gi|731317716|ref|XP_010669335.1| PREDICTED: copia
           protein isoform X1 [Beta vulgaris subsp. vulgaris]
          Length = 977

 Score = 83.2 bits (204), Expect = 6e-14
 Identities = 63/168 (37%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
 Frame = -2

Query: 504 GYKCYDLSGRKIIISQHVVFDETQFPFAKIHTSTAITYDFVNDRLHP-LLHRYLLNQSVP 328
           GYKCYDLS  KII+S+HV+FDETQFPFAK+H+ T+ TY F++D   P L H Y+ +    
Sbjct: 293 GYKCYDLSSNKIILSRHVIFDETQFPFAKLHSPTSSTYSFLDDAPSPYLTHHYMTS---- 348

Query: 327 VR*EPELDAITPSPVXXXXXXXXXXXXXXXXXXXXXQLKTHSQVAHRST-PSSTAPRMST 151
               P L   TPS                       QL + S    RS  P ++ P +S 
Sbjct: 349 ---GPSLQPTTPS----LHSTACGPRSPSHDPATGSQLPSSSPSGSRSAGPPTSQPNLSP 401

Query: 150 IR-----------PAQVSPSPFQNQTG-QPTRT-MATRSMHGIFKAQT 46
            R           P  +S  P  + T   PTR    TRS  GIFK +T
Sbjct: 402 PRALSPDLGQQPTPESLSSPPTTSPTSPPPTRPGPTTRSQRGIFKPKT 449


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